| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,057,676 | (C)7→8 | intergenic (+102/+351) | yeeN → / ← asnW | putative transcriptional regulator YeeN/tRNA‑Asn |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,057,669 | 1 | . | C | 93.8% | 100.2 / 0.2 | 32 | intergenic (+95/+358) | yeeN/asnW | putative transcriptional regulator YeeN/tRNA‑Asn |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (17/13); total (18/14) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.61e-01 | |||||||||||
CGACGATGTACAAAAAGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TA‑CCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCGACATCCCGCATAAGGCATTT > NC_000913/2057532‑2057800 | cgacgaTGTACAAAAAGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TA‑cc > 2:1112685/1‑140 (MQ=255) cgaTGTACAAAAAGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TA‑ccccc > 1:190854/1‑140 (MQ=255) aTGTACAAAAAGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TA‑ccccccc < 2:190854/140‑1 (MQ=255) aCAAAAAGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TA‑ccccccccgtt < 2:476227/140‑5 (MQ=255) aaaGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCa < 2:728029/140‑1 (MQ=255) aaaGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCa < 1:715754/140‑1 (MQ=255) aaaGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCa < 2:402492/140‑1 (MQ=255) aaaGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTCTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCa < 2:1288646/140‑1 (MQ=255) aaGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCag < 2:133635/140‑1 (MQ=255) ttATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGaa > 2:1276642/1‑140 (MQ=255) aTCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTATTC‑CCCCCCCGTTCCCAGAGAAATAATATTTATTAAAAt < 2:1447264/140‑1 (MQ=255) cTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTtcttct > 1:1017443/1‑140 (MQ=255) cTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTtcttct > 2:1408980/1‑140 (MQ=255) cTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTtcttct > 2:1470582/1‑140 (MQ=255) ttttAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTcttctt > 2:1245137/1‑140 (MQ=255) tAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCttttt < 2:1179431/140‑1 (MQ=255) tCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTAc > 1:1262411/1‑140 (MQ=255) tACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCa < 2:1017443/140‑1 (MQ=255) tttCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCaa < 1:1276642/140‑1 (MQ=255) tAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGc > 1:143244/1‑140 (MQ=255) aTCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCAt < 1:1245137/140‑1 (MQ=255) atatAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGttt > 1:571613/1‑140 (MQ=255) ttCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGAt > 1:973917/1‑140 (MQ=255) ttCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGAt < 2:143244/140‑1 (MQ=255) cTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATaa > 2:509004/1‑140 (MQ=255) tataAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAg > 1:1022456/1‑140 (MQ=255) tataAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAg > 1:947155/1‑140 (MQ=255) ataAAAAATATAATATTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTACCGATAAAGa > 2:902739/1‑140 (MQ=255) taatatTCAACTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCg < 1:1112685/140‑1 (MQ=255) aaCTCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCGACATCCCg > 2:1000637/1‑140 (MQ=255) aaCTCGTCATATTGATTA‑TA‑CCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCGACATCCCGc > 1:789008/1‑140 (MQ=255) tCGTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCGACATCCCGCAt < 2:1022456/140‑1 (MQ=255) gTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCGACa > 1:516096/1‑130 (MQ=255) gTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCGACa < 2:516096/130‑1 (MQ=255) gTCATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCAAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCGACATCCCCCATaa > 2:911655/1‑140 (MQ=255) cATATTGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCGACATCCCGCATAAgg > 2:120186/1‑140 (MQ=255) tGATTA‑TACCCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCGACATCCCGCATAAGGCAttt > 2:1216898/1‑140 (MQ=255) | CGACGATGTACAAAAAGTTTATCATAACGTCGCAAATCTCTAATTATCTTTTAAAGAAATCTGTCTTTACGGCAGATTTCTTTAATCTCATATAATTCTTATAAAAAATATAATATTCAACTCGTCATATTGATTA‑TA‑CCCCCCCGTTCCCAGAGAAATAATATTTATTAAAATTCCAGTTCTTCTTTTTCTGATTACAGAAGGCAAAGTGGCAATTACGCATAGTTTCCCGATAAAGACGCGATAGCGACATCCCGCATAAGGCATTT > NC_000913/2057532‑2057800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |