| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,767,445 | (C)7→8 | intergenic (+90/‑265) | rnlB → / → yfjP | CP4‑57 prophage; antitoxin RnlB/CP4‑57 prophage; putative GTP‑binding protein YfjP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,767,438 | 1 | . | C | 92.9% | 160.2 / 5.7 | 56 | intergenic (+83/‑272) | rnlB/yfjP | CP4‑57 prophage; antitoxin RnlB/CP4‑57 prophage; putative GTP‑binding protein YfjP |
| Reads supporting (aligned to +/- strand): ref base . (4/0); new base C (27/25); total (31/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGT > NC_000913/2767301‑2767572 | aGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑cc > 1:988009/1‑140 (MQ=255) ccTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc‑c < 2:252229/140‑1 (MQ=255) ccTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc‑c > 1:452795/1‑140 (MQ=255) ccTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc‑c < 2:452795/140‑1 (MQ=255) ccTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑acc‑c > 1:1141134/1‑140 (MQ=255) tctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc‑ccc > 2:710888/1‑140 (MQ=255) tctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc‑ccc > 2:653291/1‑140 (MQ=255) ctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc < 2:1377155/136‑1 (MQ=255) ctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc > 1:1377155/1‑136 (MQ=255) tGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc‑ccccc < 1:349166/140‑2 (MQ=255) ttttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc‑ccccctc > 2:1174485/1‑137 (MQ=255) tGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTcaca < 1:1174485/140‑1 (MQ=255) tGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTcaca < 1:851244/140‑1 (MQ=255) cccGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTc < 2:885794/140‑1 (MQ=255) ccGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTcc < 1:710888/140‑1 (MQ=255) cGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAA‑‑CCC‑CCCCTCACAACGTCCt > 1:419673/1‑140 (MQ=255) cGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AACCCCC‑CCCCTCACAACGTcc > 1:944502/1‑140 (MQ=255) cGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc‑ccccc > 2:782831/1‑127 (MQ=255) cGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑ccc‑ccccc < 1:782831/128‑2 (MQ=255) gCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAac < 2:727610/140‑1 (MQ=255) cAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAacac > 2:365004/1‑140 (MQ=255) aGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCTTAGGGAACACGt > 1:1340674/1‑140 (MQ=255) gTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAac > 1:1436901/1‑135 (MQ=255) gTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAac < 2:1436901/135‑1 (MQ=255) gTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACACCCCGCACATGGAacaagct > 2:980372/1‑136 (MQ=255) ccTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGtttt < 2:861580/140‑1 (MQ=255) gTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCTTAGGGAACACGTTTTccc < 2:1340674/140‑1 (MQ=255) gTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTccc > 2:460006/1‑140 (MQ=255) gTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTccc < 2:1181294/140‑1 (MQ=255) tGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCtgtg < 1:89607/140‑1 (MQ=255) gATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCa < 1:460006/140‑1 (MQ=255) aaaCTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGAc < 1:551214/140‑1 (MQ=255) ttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑ccc < 1:653291/140‑1 (MQ=255) gacaggTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTaa < 1:916798/135‑1 (MQ=255) aCCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTaaa < 2:1184616/140‑1 (MQ=255) tataGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTa > 1:671584/1‑133 (MQ=255) tataGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTa < 2:671584/133‑1 (MQ=255) ttCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCaataat > 2:917595/1‑140 (MQ=255) tCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTaaa < 1:819235/127‑1 (MQ=255) tCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTaaa > 2:819235/1‑127 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAA‑‑CAC‑CCCCTCACAACGTCACGCATAGGGAACACGATTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTc > 2:238145/1‑140 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACTTGGCGCATAGGGAACAACTTTTCCCCCGCGCAACCCCGACTAACCTG‑CCACCCCCTTAACCTTGTCaagactatc > 2:1000778/1‑133 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATATGGAACACGTTTGCCCCGGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATCCTGTc > 2:916798/1‑140 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTa > 2:799134/1‑123 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTa < 1:799134/123‑1 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTc > 2:86330/1‑140 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTc > 1:467963/1‑140 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTc > 1:1241044/1‑140 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTc > 2:356845/1‑140 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTc > 1:949359/1‑140 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCGCACAACGTCCTGCATAAGGTACACGAATTCCCCAGCCCACCCACGACTAATTTT‑CCCCGCCTTCACACTTGTCAATAATGTc > 2:828977/1‑140 (MQ=255) tGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑CCCACCCCTCACAACGTCCTGCATAGGGTCCACGATTCACACTGTGAGCACACGCCTAAACAT‑CCCCCCCCTTAAACTTCTCAATATTATCACCCATTTTccg > 2:351546/1‑138 (MQ=255) gATATTAACTTGTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTgg < 2:1241044/140‑1 (MQ=255) gTCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACCCGGTTTCCCCTGTCCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGCAATCCTatga > 1:1472311/1‑140 (MQ=255) tCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgat > 2:641917/1‑140 (MQ=255) tCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgat > 1:114246/1‑140 (MQ=255) tCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgat > 1:1332532/1‑140 (MQ=255) tCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgat > 1:49446/1‑140 (MQ=255) tCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgat > 1:1060134/1‑140 (MQ=255) tCCAATATGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑‑CCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgatg > 1:1206834/1‑140 (MQ=255) tCCAATATGATCAAATAGCATT‑AA‑‑CCCGCCCCTCATAACGTCCTGCATAGGGAACAAATTTGCCCCTGTGTACCACCGCCTAAATTT‑GCCCCCCTTTAATCTGTTCAATAATGCCACCAATGTCCTGCAAATCCTatgag > 2:968419/1‑139 (MQ=255) tatGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCtt < 1:828977/140‑1 (MQ=255) tGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGACCACGTTTTCCCCTGAGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTc < 2:187213/140‑1 (MQ=255) tGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTc < 1:968419/140‑1 (MQ=255) tGATCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTc < 2:790124/140‑1 (MQ=255) aTCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTccc > 1:897254/1‑140 (MQ=255) tCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatg < 1:1464244/128‑1 (MQ=255) tCAAATAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatg > 2:1464244/1‑128 (MQ=255) tCAAAAAGCATTAAA‑‑CCC‑CCCCTCCCAACACCCCCCATAGGGAAAAAGTTTTCCCCCCTGCCCCCCCCCCCAAAATT‑TCCCCCCCTTAAACCTCTCAATAAATTCACCCCTTTTCTCGGAATCCTATGATGCCTTTcccc > 2:947906/1‑139 (MQ=255) aTAGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTa > 1:547890/1‑140 (MQ=255) aGCATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAAt < 2:1332532/140‑1 (MQ=255) cATT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATgg > 2:204554/1‑140 (MQ=255) aTT‑AAC‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGt < 1:365004/140‑1 (MQ=255) | AGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑AA‑‑CCC‑CCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTT‑CCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGT > NC_000913/2767301‑2767572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |