BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,268,304	(C)_6→7	coding (451/540 nt)	yhaB →	protein YhaB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,268,298	1	.	C	100.0%	376.3 / NA	109	T149P (ACC→CCC)	yhaB	protein YhaB
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (60/49); total (60/49)

Only 100 of 117 total aligned reads displayed.

ACAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAA‑CCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCTGTTTCATC  >  NC_000913/3268159‑3268431

aCAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTaa                                                                                                                                        >  2:812362/1‑140 (MQ=255)

  aaaCATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAA‑cc                                                                                                                                     <  2:1032082/140‑1 (MQ=255)

  aaaCATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAA‑cc                                                                                                                                     <  2:1050383/140‑1 (MQ=255)

  aaaCATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAA‑cc                                                                                                                                     <  1:1169049/140‑1 (MQ=255)

  aaaCATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAA‑cc                                                                                                                                     >  1:411407/1‑140 (MQ=255)

    aCATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAA‑cccc                                                                                                                                   >  1:465719/1‑140 (MQ=255)

            tGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTtgtg                                                                                                                            <  1:1365191/140‑1 (MQ=255)

               aGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCAc                                                                                                                         >  1:1344562/1‑140 (MQ=255)

                ggCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTtgtg                                                                                                                            <  2:1273430/136‑1 (MQ=255)

                ggCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTtgtg                                                                                                                            >  2:64238/1‑136 (MQ=255)

                ggCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTtgtg                                                                                                                            <  1:825683/136‑1 (MQ=255)

                ggCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACt                                                                                                                        >  1:268454/1‑140 (MQ=255)

                ggCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACt                                                                                                                        >  2:690360/1‑140 (MQ=255)

                ggCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACt                                                                                                                        >  1:204257/1‑140 (MQ=255)

                    cTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTtaa                                                                                                                    >  1:254627/1‑140 (MQ=255)

                     ttttGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGTAAAGAAGCCATCTTAACCCCCCCTtgtg                                                                                                                            <  2:834202/131‑1 (MQ=255)

                     ttttGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGTAAAGAAGCCATCTTAACCCCCCCTtgtg                                                                                                                            >  1:834202/1‑131 (MQ=255)

                     ttttGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTtaat                                                                                                                   <  2:972950/140‑1 (MQ=255)

                         gCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATaaaa                                                                                                               <  1:973500/140‑1 (MQ=255)

                         gCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATaaaa                                                                                                               <  1:1256816/140‑1 (MQ=255)

                          cACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAAc                                                                                                              <  2:896965/140‑1 (MQ=255)

                          cACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAAc                                                                                                              >  1:324519/1‑140 (MQ=255)

                          cACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAAc                                                                                                              <  1:1147018/140‑1 (MQ=255)

                             cTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAg                                                                                                           <  1:1184858/140‑1 (MQ=255)

                               tttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCa                                                                                                         >  1:813518/1‑140 (MQ=255)

                               tttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCa                                                                                                         <  2:324519/140‑1 (MQ=255)

                               tttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCa                                                                                                         <  2:268454/140‑1 (MQ=255)

                               tttGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCa                                                                                                         <  1:521330/140‑1 (MQ=255)

                               tttGGTGAACAATGTACTTGCTCAGCCGTC‑ATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCAt                                                                                                        >  1:924027/1‑140 (MQ=255)

                                 tGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATaaa                                                                                                                <  1:1316547/131‑1 (MQ=255)

                                 tGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACATTAATaaa                                                                                                                >  2:1316547/1‑131 (MQ=255)

                                       aCAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCAtt                                                                                                       >  2:1113916/1‑134 (MQ=255)

                                        cAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAg                                                                                                >  2:1446089/1‑140 (MQ=255)

                                         aaTGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGa                                                                                               <  1:1085240/140‑1 (MQ=255)

                                           tGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGAtt                                                                                             >  2:4616/1‑140 (MQ=255)

                                                  gCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCa                                                                                      >  1:1344477/1‑140 (MQ=255)

                                                  gCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCa                                                                                      >  2:368239/1‑140 (MQ=255)

                                                     cAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAAt                                                                                   >  2:782147/1‑140 (MQ=255)

                                                     cAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAAt                                                                                   >  1:710656/1‑140 (MQ=255)

                                                       gCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATtc                                                                                 >  2:1071965/1‑140 (MQ=255)

                                                       gCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATtc                                                                                 >  1:1277025/1‑140 (MQ=255)

                                                          gTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTctct                                                                              >  1:475786/1‑140 (MQ=255)

                                                                aaaaaaGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCttttttt                                                                        <  2:1344477/140‑1 (MQ=255)

                                                                aaaaaaGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCttttttt                                                                        <  1:905129/140‑1 (MQ=255)

                                                                    aaGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCttttttt                                                                        >  2:831861/1‑136 (MQ=255)

                                                                    aaGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCttttttt                                                                        <  1:831861/136‑1 (MQ=255)

                                                                        gCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGAt                                                                <  2:1277025/140‑1 (MQ=255)

                                                                        gCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGAt                                                                <  1:4616/140‑1 (MQ=255)

                                                                         cTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATc                                                               >  1:744488/1‑140 (MQ=255)

                                                                         cTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATc                                                               >  1:474771/1‑140 (MQ=255)

                                                                                 tATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTtaat                                                       >  2:899807/1‑140 (MQ=255)

                                                                                      aGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGa                                                  >  1:1248889/1‑140 (MQ=255)

                                                                                      aGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGa                                                  >  2:568055/1‑140 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCAtt                                                            <  2:1091100/125‑1 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCAtt                                                            >  1:1091100/1‑125 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCAt                                                             >  2:1438949/1‑124 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCAt                                                             <  1:1438949/124‑1 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGAttttt                                             >  1:508072/1‑140 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGAttttt                                             >  1:277748/1‑140 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGAttttt                                             >  1:746049/1‑140 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGAttttt                                             >  2:178944/1‑140 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGAttttt                                             >  1:1292060/1‑140 (MQ=255)

                                                                                           aCGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGAttttt                                             <  1:178944/140‑1 (MQ=255)

                                                                                             gATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTAt                                           <  2:475786/140‑1 (MQ=255)

                                                                                                ttCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGa                                        <  1:608515/140‑1 (MQ=255)

                                                                                                 tCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGat                                       <  2:204257/140‑1 (MQ=255)

                                                                                                 tCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGat                                       <  2:1292060/140‑1 (MQ=255)

                                                                                                         ttGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTtata                               <  2:474771/140‑1 (MQ=255)

                                                                                                         ttGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTtata                               <  1:1446089/140‑1 (MQ=255)

                                                                                                         ttGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTtata                               <  2:465719/140‑1 (MQ=255)

                                                                                                         ttGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTtata                               <  1:1183745/140‑1 (MQ=255)

                                                                                                         ttGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTtata                               <  2:1070167/140‑1 (MQ=255)

                                                                                                          tgtgCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATaa                              >  1:511823/1‑140 (MQ=255)

                                                                                                           gtgCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATaaa                             <  1:690360/140‑1 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                            >  2:1392517/1‑140 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                            >  2:1126448/1‑140 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                            >  1:982130/1‑140 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                            >  1:897900/1‑140 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                            >  1:162898/1‑140 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                            >  1:1059201/1‑140 (MQ=255)

                                                                                                            tgCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAg                            >  1:1052984/1‑140 (MQ=255)

                                                                                                             gCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAgg                           >  1:18590/1‑140 (MQ=255)

                                                                                                             gCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAgg                           >  1:586391/1‑140 (MQ=255)

                                                                                                              cAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGa                          >  2:717046/1‑140 (MQ=255)

                                                                                                              cAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGa                          <  1:1071965/140‑1 (MQ=255)

                                                                                                              cAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGa                          >  1:253558/1‑140 (MQ=255)

                                                                                                              cAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGa                          <  2:1059201/140‑1 (MQ=255)

                                                                                                                   ttCACCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATaaaa                     <  1:1051587/140‑1 (MQ=255)

                                                                                                                      aCCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAaataa                  >  2:431233/1‑140 (MQ=255)

                                                                                                                      aCCCGAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAaataa                  >  1:765909/1‑140 (MQ=255)

                                                                                                                          gAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGtt              <  2:511823/140‑1 (MQ=255)

                                                                                                                          gAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGtt              <  2:277748/140‑1 (MQ=255)

                                                                                                                          gAAAAGAAGCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGtt              <  2:22905/140‑1 (MQ=255)

                                                                                                                             aagaagCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTccc           <  2:499803/140‑1 (MQ=255)

                                                                                                                                  gCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCt          >  2:335012/1‑136 (MQ=255)

                                                                                                                                  gCCATCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCt          <  1:335012/136‑1 (MQ=255)

                                                                                                                                      tCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATTATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCTGTTtcatc  <  1:43755/140‑1 (MQ=255)

                                                                                                                                      tCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCTGTTtcatc  <  2:1220862/140‑1 (MQ=255)

                                                                                                                                      tCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCTGTTtcatc  <  1:523883/140‑1 (MQ=255)

                                                                                                                                      tCTTAACCCCCCCTTGTGCACTTTAATAAAACCAGCATTACTCCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCTGTTtcatc  >  1:708831/1‑140 (MQ=255)

ACAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAA‑CCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGATTATTTATAAAGGATAAAATAATGTTCCCTGTTTCATC  >  NC_000913/3268159‑3268431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`