Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,857,096 Δ2,538 bp coding (4‑2541/2562 nt) mutS → DNA mismatch repair protein MutS

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2857096 2859633 2538 80 [0] [0] 80 mutS DNA mismatch repair protein MutS

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 28570950 (0.000)80 (0.920) 54/274 0.3 100% coding (3/2562 nt) mutS DNA mismatch repair protein MutS
?NC_000913 2859634 = 0 (0.000)coding (2542/2562 nt) mutS DNA mismatch repair protein MutS

GAACGCCGCCGCTACGCAAGTGGATGGTACGCAAATGTCTTTGCTGTCAGTACCAGAAGAAACTTCGCCTGCGGTCGAAGCTCTGGAAAATCTTGATCCGGATTCACTCACCCCGCGTCAGGCGCTGGAGTGGATTTATCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTAC  >  NC_000913/2859495‑2859770
                                                                                                                                           |                                                                                                                                        
gaaccagcatcaagaactcgccgttcgcttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgc                                                                                                                                          <  1:396808‑M2/1‑1 (MQ=255)
   ccagcatcaagaactcgccgttcgcttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCt                                                                                                                                       >  2:1132575‑M2/137‑140 (MQ=255)
      gcatcaagaactcgccgttcgcttcttcccctgcaatgattaactccggtatcatgtgcgccttctgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGa                                                                                                                                    <  2:1177858‑M2/7‑1 (MQ=255)
            agaactcgccgttcgcttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGcc                                                                                                                              <  2:146174‑M2/13‑1 (MQ=255)
             gaactcgccgttcgcttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCt                                                                                                                             <  2:260214‑M2/14‑1 (MQ=255)
               actcgccgttcgcttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTgg                                                                                                                           <  1:1269577‑M2/16‑1 (MQ=255)
                ctcgccgttcgcttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGcc                                                                                                                              <  1:1193171‑M2/13‑1 (MQ=255)
                ctcgccgttcgcttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGcc                                                                                                                              >  2:1193171‑M2/124‑136 (MQ=255)
                 tcgccgttcgcttcttcccctgaaatgattaactccggtaccatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGgtg                                                                                                                         >  1:792531‑M2/123‑140 (MQ=255)
                  cgccgttcgcttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGgtgt                                                                                                                        <  1:1477692‑M2/19‑1 (MQ=255)
                     cgttcgcttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGtaat                                                                                                                     <  2:1378964‑M2/22‑1 (MQ=255)
                           cttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAAt                                                                                                               <  1:915148‑M2/28‑1 (MQ=255)
                           cttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAAt                                                                                                               <  1:94708‑M2/28‑1 (MQ=255)
                            ttcttcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAAtt                                                                                                              <  1:798479‑M2/29‑1 (MQ=255)
                                tcccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCg                                                                                                          <  1:175225‑M2/33‑1 (MQ=255)
                                 cccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGa                                                                                                         <  2:150932‑M2/34‑1 (MQ=255)
                                  ccctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGAt                                                                                                        >  1:980942‑M2/106‑140 (MQ=255)
                                   cctgaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcaggaaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATa                                                                                                       <  2:332731‑M2/36‑1 (MQ=255)
                                      gaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGa                                                                                                         >  2:1267301‑M2/102‑135 (MQ=255)
                                      gaaatgattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGa                                                                                                         <  1:1267301‑M2/34‑1 (MQ=255)
                                           gattaactccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTg                                                                                               >  2:1389752‑M2/97‑140 (MQ=255)
                                                actccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATc                                                                                          <  2:428854‑M2/49‑1 (MQ=255)
                                                  tccggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCgg                                                                                        <  1:662768‑M2/51‑1 (MQ=255)
                                                    cggtatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacatcccatttaacatcagggaaccggacatcaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGa                                                                                      <  2:1320948‑M2/53‑1 (MQ=255)
                                                       tatcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAata                                                                                   <  1:87616‑M2/56‑1 (MQ=255)
                                                         tcatgtgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATAtt                                                                                 >  1:391900‑M2/83‑140 (MQ=255)
                                                            tgtgcgccttatgtgaatacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAAc                                                                              <  2:558117‑M2/61‑1 (MQ=255)
                                                              tgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGa                                                                            >  2:1394632‑M2/78‑140 (MQ=255)
                                                              tgcgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGa                                                                            >  1:774595‑M2/78‑140 (MQ=255)
                                                                cgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACa                                                                          >  1:185025‑M2/76‑140 (MQ=255)
                                                                cgccttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACa                                                                          >  1:767510‑M2/76‑140 (MQ=255)
                                                                   cttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCggg                                                                                       <  1:1419649‑M2/52‑1 (MQ=255)
                                                                   cttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCggg                                                                                       >  2:1419649‑M2/73‑124 (MQ=255)
                                                                   cttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACt                                                                       >  2:744929‑M2/73‑140 (MQ=255)
                                                                   cttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACt                                                                       >  2:98765‑M2/73‑140 (MQ=255)
                                                                   cttatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACt                                                                       >  1:120012‑M2/73‑140 (MQ=255)
                                                                   attatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACt                                                                       >  1:146647‑M2/73‑140 (MQ=255)
                                                                     tatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCTGGAATATTAACGACAACTGa                                                                     >  1:120643‑M2/71‑140 (MQ=255)
                                                                     tatgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGa                                                                     >  1:423294‑M2/71‑140 (MQ=255)
                                                                      atgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGAc                                                                    >  1:1134177‑M2/70‑140 (MQ=255)
                                                                       tgtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACg                                                                   >  2:571820‑M2/69‑140 (MQ=255)
                                                                        gtgattacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTTACGa                                                                  >  1:92652‑M2/68‑140 (MQ=255)
                                                                             tacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGaataaa                                                             >  1:969662‑M2/63‑140 (MQ=255)
                                                                             tacaacgaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGaataaa                                                             >  1:1266944‑M2/63‑140 (MQ=255)
                                                                                   gaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAAtaaaataaaa                                                       <  1:1132575‑M2/84‑1 (MQ=255)
                                                                                   gaaaataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAAtaaaataaaa                                                       <  2:185025‑M2/84‑1 (MQ=255)
                                                                                      aataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTTACGAATAAAATAAAAaca                                                    <  2:92652‑M2/87‑1 (MQ=255)
                                                                                      aataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAaca                                                    <  2:869890‑M2/87‑1 (MQ=255)
                                                                                      aataaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAaca                                                    <  2:1218025‑M2/87‑1 (MQ=255)
                                                                                        taaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACAcc                                                  <  2:423294‑M2/89‑1 (MQ=255)
                                                                                        taaaaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACAcc                                                  <  1:571820‑M2/89‑1 (MQ=255)
                                                                                           aaaccatcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCTGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTg                                               <  2:120643‑M2/92‑1 (MQ=255)
                                                                                                 tcacaccccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTataat                                         >  1:1240416‑M2/43‑140 (MQ=255)
                                                                                                     accccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGa                                     <  1:1389752‑M2/102‑1 (MQ=255)
                                                                                                     accccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGa                                     <  1:593595‑M2/102‑1 (MQ=255)
                                                                                                       cccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGaaa                                   >  1:189523‑M2/37‑140 (MQ=255)
                                                                                                       cccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGaaa                                   <  2:969662‑M2/104‑1 (MQ=255)
                                                                                                       cccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGaaa                                   <  2:645361‑M2/104‑1 (MQ=255)
                                                                                                       cccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGaaa                                   <  1:98765‑M2/104‑1 (MQ=255)
                                                                                                       cccatttaatatcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGaaa                                   <  2:792531‑M2/104‑1 (MQ=255)
                                                                                                                 atcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTa                         <  2:637847‑M2/114‑1 (MQ=255)
                                                                                                                 atcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTa                         <  1:1242239‑M2/114‑1 (MQ=255)
                                                                                                                 atcagggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTa                         <  2:774595‑M2/114‑1 (MQ=255)
                                                                                                                    agggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAgg                                      <  2:1026678‑M2/101‑1 (MQ=255)
                                                                                                                    agggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAgg                                      >  1:1026678‑M2/24‑124 (MQ=255)
                                                                                                                    agggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAg                      >  1:1363375‑M2/24‑140 (MQ=255)
                                                                                                                     gggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAgg                     >  2:232279‑M2/23‑140 (MQ=255)
                                                                                                                     gggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAgg                     >  2:92450‑M2/23‑140 (MQ=255)
                                                                                                                     gggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAgg                     >  2:941257‑M2/23‑140 (MQ=255)
                                                                                                                      ggaaccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAggg                    >  1:340886‑M2/22‑140 (MQ=255)
                                                                                                                          ccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTa                         <  2:1073951‑M2/114‑1 (MQ=255)
                                                                                                                          ccggacataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTa                         >  1:1073951‑M2/18‑131 (MQ=255)
                                                                                                                                ataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATg          <  2:1134177‑M2/129‑1 (MQ=255)
                                                                                                                                ataaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATg          >  1:775139‑M2/12‑140 (MQ=255)
                                                                                                                                 taaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGc         <  2:146647‑M2/130‑1 (MQ=255)
                                                                                                                                  aaccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGcc        <  2:1266944‑M2/131‑1 (MQ=255)
                                                                                                                                    ccccatgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAAT‑AAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATc     >  2:1248768‑M2/8‑140 (MQ=255)
                                                                                                                                        atgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTac  >  2:524070‑M2/4‑140 (MQ=255)
                                                                                                                                         tgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGc         >  2:744619‑M2/3‑132 (MQ=255)
                                                                                                                                         tgCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGc         <  1:744619‑M2/130‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                        
GAACGCCGCCGCTACGCAAGTGGATGGTACGCAAATGTCTTTGCTGTCAGTACCAGAAGAAACTTCGCCTGCGGTCGAAGCTCTGGAAAATCTTGATCCGGATTCACTCACCCCGCGTCAGGCGCTGGAGTGGATTTATCGCTTGAAGAGCCTGGTGTAATAACAATTCCCGATAGTCTTTTGCTATCGGGAATATTAACGACAACTGACGAATAAAATAAAAACACCCTGTATAATAGGAAAGCTTATTTTACAGGGTAAAACCATGCCATCTAC  >  NC_000913/2859495‑2859770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑