Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,228,774	T→C	intergenic (‑16/‑208)	mdtQ ← / → yohP	putative multidrug resistance outer membrane protein MdtQ/putative membrane protein YohP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,228,774	0	T	C	100.0%	316.1 / NA	91	intergenic (‑16/‑208)	mdtQ/yohP	putative multidrug resistance outer membrane protein MdtQ/putative membrane protein YohP
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (45/46);  total (45/46)

TGCAGCGGGCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGTAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGTGAATGATATCTTCCGATTTATCTTAAT  >  NC_000913/2228642‑2228909                                                                                                                                     |                                                                                                                                        tgCAGCGGGCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGaaaa                                                                                                                                  >  1:1182020/1‑140 (MQ=255)   cAGCGGGCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAgg                                                                                                                                >  2:940574/1‑140 (MQ=255)   cAGCGGGCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAgg                                                                                                                                >  1:869139/1‑140 (MQ=255)   cAGCGGGCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAgg                                                                                                                                >  1:1440251/1‑140 (MQ=255)    aGCGGGCGTTTGCTGGCTTAACGCCTGGCGGGTTTCGTGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGt                                                                                                                               <  2:779933/140‑1 (MQ=255)      cGGGCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTgc                                                                                                                             <  2:226153/140‑1 (MQ=255)      cGGGCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTgc                                                                                                                             <  1:748111/140‑1 (MQ=255)      cGGGCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTgc                                                                                                                             <  2:607258/140‑1 (MQ=255)        ggCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTgcgc                                                                                                                           <  1:288729/140‑1 (MQ=255)        ggCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTgc                                                                                                                             >  1:1329705/1‑138 (MQ=255)        ggCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTgc                                                                                                                             <  2:1329705/138‑1 (MQ=255)           gTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGga                                                                                                                        <  2:621940/140‑1 (MQ=255)                    cTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGga                                                                                                                        >  2:744921/1‑131 (MQ=255)                    cTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGga                                                                                                                        <  1:744921/131‑1 (MQ=255)                    cTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCgt                                                                                                               >  2:362514/1‑140 (MQ=255)                       aaCGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCgtgtg                                                                                                            >  1:809084/1‑140 (MQ=255)                       aaCGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCgtgtg                                                                                                            <  1:68168/140‑1 (MQ=255)                            cTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCg                                                                                                       <  2:932048/140‑1 (MQ=255)                             tGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGa                                                                                                      >  2:65127/1‑140 (MQ=255)                             tGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGa                                                                                                      >  2:1068159/1‑140 (MQ=255)                             tGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGa                                                                                                      >  1:672980/1‑140 (MQ=255)                                    tttCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATAttt                                                                                               >  1:99115/1‑140 (MQ=255)                                      tCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATAttttt                                                                                             >  2:136174/1‑140 (MQ=255)                                             tAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCAT‑GGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcg                                                                                     >  1:1158087/1‑140 (MQ=255)                                              aGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcg                                                                                     <  1:362514/140‑1 (MQ=255)                                              aGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcg                                                                                     >  1:401031/1‑140 (MQ=255)                                               ggCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcgc                                                                                    <  2:302120/140‑1 (MQ=255)                                                gcgcACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcgcg                                                                                   >  1:1260401/1‑140 (MQ=255)                                                gcgcACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcgcg                                                                                   >  2:1369888/1‑140 (MQ=255)                                                gcgcACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcgcg                                                                                   <  2:655024/140‑1 (MQ=255)                                                 cgcACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAGGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGt                                                                                  <  1:263634/140‑1 (MQ=255)                                                 cgcACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGt                                                                                  <  1:209661/140‑1 (MQ=255)                                                 cgcACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGt                                                                                  <  1:940574/140‑1 (MQ=255)                                                 cgcACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGt                                                                                  <  2:481707/140‑1 (MQ=255)                                                 cgcACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGt                                                                                  <  2:1440251/140‑1 (MQ=255)                                                    acacCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcgcg                                                                                   >  1:1296251/1‑136 (MQ=255)                                                    acacCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcgcg                                                                                   <  2:1296251/136‑1 (MQ=255)                                                    acacCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcg                                                                                     <  1:657832/134‑1 (MQ=255)                                                    acacCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTcg                                                                                     >  2:657832/1‑134 (MQ=255)                                                    acacCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTgg                                                                                <  2:1461947/139‑1 (MQ=255)                                                    acacCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTgg                                                                                >  1:1461947/1‑139 (MQ=255)                                                    acacCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGc                                                                               >  2:286060/1‑140 (MQ=255)                                                     cacCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCa                                                                              >  1:1175118/1‑140 (MQ=255)                                                     cacCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCa                                                                              >  1:754269/1‑140 (MQ=255)                                                      acCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCaa                                                                             >  2:109443/1‑140 (MQ=255)                                                      acCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCaa                                                                             <  2:1099734/140‑1 (MQ=255)                                                          ggCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACa                                                                         >  2:136678/1‑140 (MQ=255)                                                          ggCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACa                                                                         >  1:914549/1‑140 (MQ=255)                                                           gCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACAt                                                                        >  1:632370/1‑140 (MQ=255)                                                               gCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGt                                                                    <  2:754269/140‑1 (MQ=255)                                                                  tCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGc                                                                 <  1:1369888/140‑1 (MQ=255)                                                                  tCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGc                                                                 >  1:175377/1‑140 (MQ=255)                                                                     gTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAAt                                                              >  2:296886/1‑140 (MQ=255)                                                                     gTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAAt                                                              >  1:815134/1‑140 (MQ=255)                                                                     gTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCCATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAAt                                                              <  2:216577/140‑1 (MQ=255)                                                                      tAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATa                                                             >  2:168544/1‑140 (MQ=255)                                                                          aGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAAc                                                         >  1:196504/1‑140 (MQ=255)                                                                          aGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAAc                                                         >  1:601447/1‑140 (MQ=255)                                                                           gCGGCAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCTGGCAAGAAAAGTTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGATTCGCGTGGCAATACATCAGTGGCAATAAAACg                                                        >  2:462530/1‑140 (MQ=255)                                                                            cGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGa                                                       >  1:496532/1‑140 (MQ=255)                                                                            cGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGa                                                       >  2:316636/1‑140 (MQ=255)                                                                             ggAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGAc                                                      >  2:446518/1‑140 (MQ=255)                                                                             ggAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGAc                                                      <  2:869139/140‑1 (MQ=255)                                                                             ggAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGAc                                                      >  2:1207107/1‑140 (MQ=255)                                                                              gAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGAc                                                      <  1:1310830/139‑1 (MQ=255)                                                                              gAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGAc                                                      >  2:1310830/1‑139 (MQ=255)                                                                              gAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACa                                                     >  2:1099810/1‑140 (MQ=255)                                                                               aaaaCAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGAGAGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACat                                                    >  1:313230/1‑140 (MQ=255)                                                                                 aaCAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACatat                                                  >  1:341291/1‑140 (MQ=255)                                                                                  aCAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATc                                                 <  1:109443/140‑1 (MQ=255)                                                                                  aCAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATc                                                 <  2:632370/140‑1 (MQ=255)                                                                                    aGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCa                                               <  2:496532/140‑1 (MQ=255)                                                                                      gCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGa                                             <  1:296886/140‑1 (MQ=255)                                                                                      gCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGa                                             <  2:207470/140‑1 (MQ=255)                                                                                      gCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGa                                             <  1:446518/140‑1 (MQ=255)                                                                                              tGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAAtata                                     >  1:1205371/1‑140 (MQ=255)                                                                                                gATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATaca                                   <  1:467902/140‑1 (MQ=255)                                                                                                gATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATaca                                   <  2:196504/140‑1 (MQ=255)                                                                                                gATAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATaca                                   <  2:372408/140‑1 (MQ=255)                                                                                                  tAAAAGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACt                                 <  1:65127/140‑1 (MQ=255)                                                                                                    aaaGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTaa                               <  2:1260401/140‑1 (MQ=255)                                                                                                      aGGAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGt                             <  2:401031/140‑1 (MQ=255)                                                                                                        gAATCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGTGa                           <  1:136174/140‑1 (MQ=255)                                                                                                           tCACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGTGAATg                        >  2:506769/1‑140 (MQ=255)                                                                                                            cACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATaca                                   <  2:544101/128‑1 (MQ=255)                                                                                                            cACGATTCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATaca                                   >  1:544101/1‑128 (MQ=255)                                                                                                                  tCATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGTGAATGATATCtt                 <  1:876225/140‑1 (MQ=255)                                                                                                                   cATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGTGAATGATATCtt                 <  2:649733/139‑1 (MQ=255)                                                                                                                   cATGGGGGAATAATCAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGTGAATGATATCtt                 >  1:649733/1‑139 (MQ=255)                                                                                                                                 cAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGTGAATGATATCTTCCGATTTATCTTAAt  <  2:672980/140‑1 (MQ=255)                                                                                                                                 cAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGTGAATGATATCTTCCGATTTATCTTAAt  <  1:506769/140‑1 (MQ=255)                                                                                                                                 cAGGCAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGTGAATGATATCTTCCGATTTATCTTAAt  <  2:815134/140‑1 (MQ=255)                                                                                                                                     |                                                                                                                                        TGCAGCGGGCGTTTGCTGGCTTAACGCCTGGCGGGTTTCATGCATAGGCGCACACCCGGCCAGCATCAGTAACAGCGGAAAACAGGCGATGGCTGGATAAAAGGAATCACGATTCATGGGGGAATAATCAGGTAAGAAAAGGTGCGCGGAGATTACCGTGTGTTGCGATATATTTTTTAGTTTCGCGTGGCAATACATCAGTGGCAATAAAACGACATATCCAGAAAAATATACACTAAGTGAATGATATCTTCCGATTTATCTTAAT  >  NC_000913/2228642‑2228909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑