Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,719,486	T→C	R88R (CGT→CGC)	yfiP →	conserved protein YfiP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,719,486	0	T	C	100.0%	338.3 / NA	98	R88R (CGT→CGC)	yfiP	conserved protein YfiP
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (55/43);  total (55/43)

TTCGACAATTACCCCAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGTACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCACCGC  >  NC_000913/2719351‑2719616                                                                                                                                        |                                                                                                                                   ttCGACAATTACCCCAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCg                                                                                                                                >  1:987811/1‑140 (MQ=255) ttCGACAATTACCCCAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCg                                                                                                                                >  2:370995/1‑140 (MQ=255)     aCAATTACCCCAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAAcc                                                                                                                            >  2:751288/1‑140 (MQ=255)           aCCCCAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCa                                                                                                                      >  1:1110991/1‑140 (MQ=255)           aCCCCAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCa                                                                                                                      >  1:128474/1‑140 (MQ=255)             cccAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAgg                                                                                                                    <  1:370995/140‑1 (MQ=255)              ccAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGa                                                                                                                   <  2:987811/140‑1 (MQ=255)               cAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCg                                                                                                                        >  1:888096/1‑134 (MQ=255)               cAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCg                                                                                                                        <  2:888096/134‑1 (MQ=255)                aGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGAtt                                                                                                                 >  1:1352070/1‑140 (MQ=255)                 gCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGAttt                                                                                                                >  2:975132/1‑140 (MQ=255)                  cacaAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTg                                                                                                               >  2:1236757/1‑140 (MQ=255)                    caAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCt                                                                                                             >  1:541154/1‑140 (MQ=255)                     aaGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAAc                                                                                                                             >  2:233925/1‑123 (MQ=255)                     aaGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAAc                                                                                                                             <  1:233925/123‑1 (MQ=255)                       gCAAAAAGTCGCTTCTGTTTGCTGATGTTGGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGa                                                                                                          >  2:1337637/1‑140 (MQ=255)                       gCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGa                                                                                                          >  2:802906/1‑140 (MQ=255)                       gCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGa                                                                                                          >  1:1377823/1‑140 (MQ=255)                         aaaaaGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGt                                                                                                        <  2:128474/140‑1 (MQ=255)                          aaaaGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGtt                                                                                                       <  2:1110991/140‑1 (MQ=255)                                       gTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCg                                                                                          <  2:541154/140‑1 (MQ=255)                                       gTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCg                                                                                          <  2:1179411/140‑1 (MQ=255)                                         ttGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGa                                                                                        >  1:694612/1‑140 (MQ=255)                                            cTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTa                                                                                     <  1:975132/140‑1 (MQ=255)                                             tGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTAt                                                                                    <  2:1141580/140‑1 (MQ=255)                                             tGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTAt                                                                                    >  1:421478/1‑140 (MQ=255)                                             tGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTAt                                                                                    >  2:634384/1‑140 (MQ=255)                                               aTGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCa                                                                                  >  1:509980/1‑140 (MQ=255)                                                  ttCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGa                                                                                        <  1:1456212/131‑1 (MQ=255)                                                  ttCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGa                                                                                        >  2:1456212/1‑131 (MQ=255)                                                  ttCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTa                                                                                     >  2:1246276/1‑134 (MQ=255)                                                  ttCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTa                                                                                     <  1:1246276/134‑1 (MQ=255)                                                    cGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCaa                                                                             <  1:751915/140‑1 (MQ=255)                                                      acacCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAAtg                                                                           <  1:1337637/140‑1 (MQ=255)                                                       cacCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAAtgg                                                                          >  2:410079/1‑140 (MQ=255)                                                           gAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATggtggt                                                                      <  1:802906/140‑1 (MQ=255)                                                           gAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATggtggt                                                                      >  2:107521/1‑140 (MQ=255)                                                            aGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAAtgg                                                                          >  2:795282/1‑135 (MQ=255)                                                            aGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAAtgg                                                                          <  1:795282/135‑1 (MQ=255)                                                            aGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTc                                                                     >  1:186753/1‑140 (MQ=255)                                                                aaTGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTc                                                                 <  2:186753/140‑1 (MQ=255)                                                                 aTGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTcc                                                                <  1:113767/140‑1 (MQ=255)                                                                 aTGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTc                                                                 <  2:275892/139‑1 (MQ=255)                                                                 aTGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTc                                                                 >  1:275892/1‑139 (MQ=255)                                                                   gAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCg                                                              <  1:107521/140‑1 (MQ=255)                                                                   gAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCg                                                              <  1:751288/140‑1 (MQ=255)                                                                     aGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCt                                                            <  2:73629/140‑1 (MQ=255)                                                                       cccAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTc                                                          <  2:1352070/140‑1 (MQ=255)                                                                       cccAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTc                                                          >  2:879188/1‑140 (MQ=255)                                                                          aGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTa                                                       <  2:509980/140‑1 (MQ=255)                                                                            tAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATg                                                     <  2:1322849/140‑1 (MQ=255)                                                                            tAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATg                                                     >  1:678338/1‑140 (MQ=255)                                                                            tAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATg                                                     <  2:694612/140‑1 (MQ=255)                                                                            tAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATg                                                     >  1:1322849/1‑140 (MQ=255)                                                                                 ccGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCtgat                                                >  1:518958/1‑140 (MQ=255)                                                                                 ccGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCtgat                                                >  1:842903/1‑140 (MQ=255)                                                                                    ggCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAg                                             >  2:470757/1‑140 (MQ=255)                                                                                     gCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGc                                            >  1:812450/1‑140 (MQ=255)                                                                                      cGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCa                                           >  1:1399083/1‑140 (MQ=255)                                                                                      cGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCa                                           >  1:1405216/1‑140 (MQ=255)                                                                                      cGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCa                                           >  1:429319/1‑140 (MQ=255)                                                                                         ctcATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACg                                        >  1:1316855/1‑140 (MQ=255)                                                                                         ctcATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACg                                        >  1:77550/1‑140 (MQ=255)                                                                                         ctcATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACg                                        >  2:1340556/1‑140 (MQ=255)                                                                                         ctcATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACg                                        >  1:1211828/1‑140 (MQ=255)                                                                                           cATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACggg                                      <  2:429319/140‑1 (MQ=255)                                                                                               gCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGt                                  <  1:553822/140‑1 (MQ=255)                                                                                                   atatTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCtgatga                                              >  2:970573/1‑124 (MQ=255)                                                                                                   atatTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCtgatga                                              <  1:970573/124‑1 (MQ=255)                                                                                                   atatTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATc                              >  1:865176/1‑140 (MQ=255)                                                                                                   atatTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATc                              >  1:343016/1‑140 (MQ=255)                                                                                                    tatTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTg                                 <  1:1041311/136‑1 (MQ=255)                                                                                                    tatTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTg                                 >  2:1041311/1‑136 (MQ=255)                                                                                                    tatTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCt                             <  2:678338/140‑1 (MQ=255)                                                                                                      ttttGCCTGATACCGTTGCGTTTCAATGGTCGCGCACCGAATCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTc                           >  2:614601/1‑140 (MQ=255)                                                                                                           ccTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTca                          >  1:124216/1‑136 (MQ=255)                                                                                                           ccTGATACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTca                          <  2:124216/136‑1 (MQ=255)                                                                                                               aTACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCt                  >  2:1374568/1‑140 (MQ=255)                                                                                                               aTACCGTTGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCt                  <  1:470757/140‑1 (MQ=255)                                                                                                                     ttGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGt            >  1:699211/1‑140 (MQ=255)                                                                                                                     ttGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGt            >  1:899029/1‑140 (MQ=255)                                                                                                                     ttGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGt            >  2:1150296/1‑140 (MQ=255)                                                                                                                     ttGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGt            >  2:1167267/1‑140 (MQ=255)                                                                                                                     ttGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGt            >  2:1408457/1‑140 (MQ=255)                                                                                                                     ttGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGt            >  2:1312878/1‑140 (MQ=255)                                                                                                                     ttGCGTTTCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCAgga            >  2:927613/1‑139 (MQ=255)                                                                                                                          tttCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTaa          <  1:408925/137‑1 (MQ=255)                                                                                                                          tttCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTaa          >  2:408925/1‑137 (MQ=255)                                                                                                                          tttCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGcc       >  2:1152856/1‑140 (MQ=255)                                                                                                                           ttCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGAAAGTGATCTTCACACCACCTGCCGGTAAGCCa      <  2:842903/140‑1 (MQ=255)                                                                                                                            tCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCAc     <  1:634384/140‑1 (MQ=255)                                                                                                                            tCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCAc     <  2:77550/140‑1 (MQ=255)                                                                                                                            tCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCAc     <  1:614601/140‑1 (MQ=255)                                                                                                                            tCAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCAc     <  2:1316855/140‑1 (MQ=255)                                                                                                                             cAATGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCAcc    <  2:421478/140‑1 (MQ=255)                                                                                                                              aaTGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCACCg   <  2:1211828/140‑1 (MQ=255)                                                                                                                              aaTGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCACCg   <  2:899029/140‑1 (MQ=255)                                                                                                                              aaTGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCACCg   <  1:410079/140‑1 (MQ=255)                                                                                                                               aTGGTCGCGCACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCACCGc  <  1:1408457/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                   TTCGACAATTACCCCAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGTACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCACCGC  >  NC_000913/2719351‑2719616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑