BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,880,898	T→C	T51A (ACT→GCT)	casD ←	type I‑E CRISPR system Cascade subunit CasD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,880,898	0	T	C	100.0%	432.7 / NA	123	T51A (ACT→GCT)	casD	type I‑E CRISPR system Cascade subunit CasD
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (74/49); total (74/49)

Only 100 of 127 total aligned reads displayed.

GGTAATCTTCTCGCGCTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGTATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGAT  >  NC_000913/2880763‑2881033

ggTAATCTTCTCGCGCTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCatca                                                                                                                                     <  2:1452969/140‑1 (MQ=255)

 gTAATCTTCTCGCGCTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGcatcat                                                                                                                                    <  2:169132/140‑1 (MQ=255)

 gTAATCTTCTCGCGCTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGcatcat                                                                                                                                    <  2:317253/140‑1 (MQ=255)

        tctcGCGCTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTg                                                                                                                             <  1:572541/140‑1 (MQ=255)

          tcGCGCTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGa                                                                                                                           >  1:1309698/1‑140 (MQ=255)

            gcgcTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGcatcat                                                                                                                                    <  1:162657/129‑1 (MQ=255)

            gcgcTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGcatcat                                                                                                                                    >  2:162657/1‑129 (MQ=255)

              gcTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATccc                                                                                                                       <  2:569708/140‑1 (MQ=255)

               cTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCa                                                                                                                      >  2:498402/1‑140 (MQ=255)

                tCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCaa                                                                                                                     >  1:845806/1‑140 (MQ=255)

                tCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCaa                                                                                                                     >  1:548549/1‑140 (MQ=255)

                          gTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCGTCACGTTGGATCCCAAGACAAGcccc                                                                                                           >  1:245507/1‑140 (MQ=255)

                          gTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATccc                                                                                                                       >  2:1114167/1‑128 (MQ=255)

                          gTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATccc                                                                                                                       <  1:1114167/128‑1 (MQ=255)

                          gTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGcccc                                                                                                           >  1:642953/1‑140 (MQ=255)

                           tATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAGTTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCg                                                                                                          >  1:788192/1‑140 (MQ=255)

                            aTGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGa                                                                                                         >  2:85811/1‑140 (MQ=255)

                            aTGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGa                                                                                                         >  2:351286/1‑140 (MQ=255)

                            aTGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGa                                                                                                         >  1:956037/1‑140 (MQ=255)

                            aTGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGa                                                                                                         >  1:740980/1‑140 (MQ=255)

                              ggTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAGTTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGt                                                                                                       <  2:788192/140‑1 (MQ=255)

                                tAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAg                                                                                                     >  1:672714/1‑140 (MQ=255)

                                tAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAg                                                                                                     <  2:1440602/140‑1 (MQ=255)

                                tAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAg                                                                                                     <  1:1233932/140‑1 (MQ=255)

                                   tCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAg                                                                                                        <  2:917460/134‑1 (MQ=255)

                                   tCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAg                                                                                                        >  1:917460/1‑134 (MQ=255)

                                     aCGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAg                                                                                                     >  1:730783/1‑135 (MQ=255)

                                     aCGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCta                                                                                                >  1:478531/1‑140 (MQ=255)

                                     aCGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCta                                                                                                >  2:1464707/1‑140 (MQ=255)

                                     aCGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCta                                                                                                >  2:155685/1‑140 (MQ=255)

                                     aCGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCta                                                                                                >  2:50955/1‑140 (MQ=255)

                                                 tACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTc                                                                                    >  2:934843/1‑140 (MQ=255)

                                                  aCAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGGTAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCg                                                                                   <  2:325267/140‑1 (MQ=255)

                                                      acacacGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTc                                                                               >  2:677027/1‑140 (MQ=255)

                                                         cacGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGa                                                                            <  2:845806/140‑1 (MQ=255)

                                                         cacGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGa                                                                            <  2:1309698/140‑1 (MQ=255)

                                                          acgacgATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGaa                                                                           >  1:1388988/1‑140 (MQ=255)

                                                            gacgaTCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGa                                                                            <  1:1422949/137‑1 (MQ=255)

                                                            gacgaTCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGa                                                                            >  2:1422949/1‑137 (MQ=255)

                                                              cgaTCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCt                                                                       >  2:658507/1‑140 (MQ=255)

                                                                aTCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTc                                                                     >  1:1372209/1‑140 (MQ=255)

                                                                aTCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTc                                                                     >  2:391321/1‑140 (MQ=255)

                                                                  cGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCg                                                                   >  1:285045/1‑140 (MQ=255)

                                                                   gTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCgg                                                                  <  2:1388988/140‑1 (MQ=255)

                                                                    tCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGt                                                                 >  2:400963/1‑140 (MQ=255)

                                                                        gAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGt                                                             <  1:408876/140‑1 (MQ=255)

                                                                           tGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTcgc                                                          <  2:710248/140‑1 (MQ=255)

                                                                           tGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTcgc                                                          >  2:1108498/1‑140 (MQ=255)

                                                                             aGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCGTCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGt                                                        <  2:245507/140‑1 (MQ=255)

                                                                             aGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGt                                                        >  2:621562/1‑140 (MQ=255)

                                                                             aGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGt                                                        <  2:476262/140‑1 (MQ=255)

                                                                             aGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGt                                                        <  1:621562/140‑1 (MQ=255)

                                                                               ttCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTc                                                      >  1:1045770/1‑140 (MQ=255)

                                                                               ttCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTc                                                      >  1:1401256/1‑140 (MQ=255)

                                                                               ttCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTc                                                      >  1:5721/1‑140 (MQ=255)

                                                                                   tCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTc                                                  >  1:654288/1‑140 (MQ=255)

                                                                                    cGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCa                                                 <  2:478531/140‑1 (MQ=255)

                                                                                       aGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAg                                              <  1:677027/140‑1 (MQ=255)

                                                                                         cgcACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGt                                                        >  1:16988/1‑128 (MQ=255)

                                                                                         cgcACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGt                                                        >  1:270844/1‑128 (MQ=255)

                                                                                         cgcACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGt                                            >  1:1300675/1‑140 (MQ=255)

                                                                                           cACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCC‑‑‑‑‑CAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGc                                     >  1:403524/1‑140 (MQ=255)

                                                                                            aCTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCgg                                         >  1:149011/1‑140 (MQ=255)

                                                                                             cTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGc                                        >  1:1319429/1‑140 (MQ=255)

                                                                                              tGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCt                                       <  2:5721/140‑1 (MQ=255)

                                                                                                   aTTGCACACTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGcccc                                  <  2:372105/140‑1 (MQ=255)

                                                                                                         cacTCTCTGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCt                            <  1:47880/140‑1 (MQ=255)

                                                                                                            tctctGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGc                         >  1:235493/1‑140 (MQ=255)

                                                                                                             ctctGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCa                        >  2:881590/1‑140 (MQ=255)

                                                                                                              tctGATAACGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCAt                       >  2:1148502/1‑140 (MQ=255)

                                                                                                                      cGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGc                         >  2:826202/1‑130 (MQ=255)

                                                                                                                      cGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGc                         <  1:826202/130‑1 (MQ=255)

                                                                                                                      cGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCa                        >  2:51533/1‑131 (MQ=255)

                                                                                                                      cGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCa                        <  1:51533/131‑1 (MQ=255)

                                                                                                                      cGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAg               >  2:553052/1‑140 (MQ=255)

                                                                                                                      cGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAg               >  1:771590/1‑140 (MQ=255)

                                                                                                                      cGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAg               <  2:740980/140‑1 (MQ=255)

                                                                                                                      cGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAg               >  2:747025/1‑140 (MQ=255)

                                                                                                                      cGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAg               >  2:21283/1‑140 (MQ=255)

                                                                                                                      cGCCTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAg               >  2:1358161/1‑140 (MQ=255)

                                                                                                                        ccTGTAATGAAGAAGCATCATCGCGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCa             >  1:914423/1‑140 (MQ=255)

                                                                                                                        ccTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCa                        >  2:76079/1‑129 (MQ=255)

                                                                                                                        ccTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCa             >  1:1030323/1‑140 (MQ=255)

                                                                                                                        ccTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCa             >  1:325099/1‑140 (MQ=255)

                                                                                                                        ccTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCa             >  2:238412/1‑140 (MQ=255)

                                                                                                                        ccTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCa             >  2:471211/1‑140 (MQ=255)

                                                                                                                        ccTGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCGTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCa             >  2:1293575/1‑140 (MQ=255)

                                                                                                                          tGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCa                        <  2:184862/127‑1 (MQ=255)

                                                                                                                          tGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCa                        >  1:184862/1‑127 (MQ=255)

                                                                                                                          tGTAATGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAg           >  2:922268/1‑140 (MQ=255)

                                                                                                                           gTAATGAAGAAGCATCATCACGTTGGATCC‑‑‑‑‑CAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCaa     <  2:403524/140‑1 (MQ=255)

                                                                                                                              aTGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGc       <  1:438031/140‑1 (MQ=255)

                                                                                                                               tGAAGAAGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCa      <  2:285045/140‑1 (MQ=255)

                                                                                                                                gaagaaGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCaa     <  1:498402/140‑1 (MQ=255)

                                                                                                                                gaagaaGCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCaa     <  1:238412/140‑1 (MQ=255)

                                                                                                                                 aagaagCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAg    <  1:1148502/140‑1 (MQ=255)

                                                                                                                                   gaagCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGAt  <  1:351286/140‑1 (MQ=255)

                                                                                                                                   gaagCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGAt  <  1:747025/140‑1 (MQ=255)

                                                                                                                                   gaagCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGAt  >  2:1004986/1‑140 (MQ=255)

                                                                                                                                   gaagCATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGAt  >  2:517073/1‑140 (MQ=255)

GGTAATCTTCTCGCGCTCCAAGGACTGTATGGTAATCACGCAACCCCGTTACAGACACACGACGATCGTCAAGAATGAGTTCATCGCAGCGCACTGCAAATTGCACACTCTCTGATAACGCCTGTAATGAAGAAGTATCATCACGTTGGATCCCAAGACAAGCCCCGAGTAGCCCTAATAACCCGCTTCGGGTCGGAAATCTTCCGGTAGGTCGCGTTCCTTCAAAGGTCGGCTGCCCCCAGGCTTGCATTGGCCCAGCAAGCCGCAAGAT  >  NC_000913/2880763‑2881033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`