Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,371,435	T→C	G380G (GGA→GGG)	nanT ←	N‑acetylneuraminate:H(+) symporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,371,435	0	T	C	100.0%	314.0 / NA	90	G380G (GGA→GGG)	nanT	N‑acetylneuraminate:H(+) symporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (45/45);  total (45/45)

ATCAACGCGCCGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGTCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCGGGTTCCCAGCCAGTCA  >  NC_000913/3371301‑3371570                                                                                                                                       |                                                                                                                                        aTCAACGCGCCGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAg                                                                                                                                    >  1:1064213/1‑140 (MQ=255) aTCAACGCGCCGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAg                                                                                                                                    >  2:659842/1‑140 (MQ=255) aTCAACGCGCCGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAg                                                                                                                                    >  2:1080977/1‑140 (MQ=255)    aaCGCGCCGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCAt                                                                                                                                 >  2:144207/1‑140 (MQ=255)        cgcCGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGc                                                                                                                             <  2:28207/140‑1 (MQ=255)         gcCGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCt                                                                                                                            >  1:1062606/1‑140 (MQ=255)         gcCGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCt                                                                                                                            >  2:1294748/1‑140 (MQ=255)           cGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGc                                                                                                                                   <  2:1145413/131‑1 (MQ=255)           cGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGc                                                                                                                                   >  1:1145413/1‑131 (MQ=255)           cGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTgg                                                                                                                          >  1:553524/1‑140 (MQ=255)           cGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTgg                                                                                                                          <  1:659911/140‑1 (MQ=255)            gatgatTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCAttt                                                                                                                               <  1:500662/134‑1 (MQ=255)            gatgatTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCAttt                                                                                                                               >  2:500662/1‑134 (MQ=255)            gatgatTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGga                                                                                                                         <  1:391744/140‑1 (MQ=255)            gatgatTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGga                                                                                                                         <  2:332796/140‑1 (MQ=255)            gatgatTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGga                                                                                                                         <  1:47825/140‑1 (MQ=255)            gatgatTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGga                                                                                                                         <  1:1072037/140‑1 (MQ=255)            gatgatTGGGGCCAGTGCACCGACCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGga                                                                                                                         <  1:651377/140‑1 (MQ=255)                atTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGgaagaa                                                                                                                     <  1:659842/140‑1 (MQ=255)                atTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGgaagaa                                                                                                                     <  1:755346/140‑1 (MQ=255)                       ccAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGgaag                                                                                                                       <  2:108354/131‑1 (MQ=255)                       ccAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGgaag                                                                                                                       >  1:108354/1‑131 (MQ=255)                          gTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGTCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGa                                                                                                           >  2:1108986/1‑140 (MQ=255)                          gTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACa                                                                                                             <  1:1231700/138‑1 (MQ=255)                          gTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACa                                                                                                             >  2:1231700/1‑138 (MQ=255)                           tGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGAc                                                                                                          >  2:1030747/1‑140 (MQ=255)                           tGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGAc                                                                                                          >  1:679346/1‑140 (MQ=255)                             cACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCg                                                                                                        <  2:412600/140‑1 (MQ=255)                              cccGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGa                                                                                                       <  2:45527/139‑1 (MQ=255)                                cGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGc                                                                                                     >  1:356670/1‑140 (MQ=255)                                cGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGc                                                                                                     >  1:819233/1‑140 (MQ=255)                                     aaTGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTaa                                                                                                               <  1:804684/125‑1 (MQ=255)                                     aaTGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTaa                                                                                                               >  2:804684/1‑125 (MQ=255)                                     aaTGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGAc                                                                                                          <  1:464258/130‑1 (MQ=255)                                     aaTGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGAc                                                                                                          >  2:464258/1‑130 (MQ=255)                                       tGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGa                                                                                                       >  2:1346005/1‑131 (MQ=255)                                       tGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGa                                                                                                       <  1:1346005/131‑1 (MQ=255)                                                   gTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGcgccgc                                                                                  <  2:679346/140‑1 (MQ=255)                                                     aGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCa                                                                                <  2:553524/140‑1 (MQ=255)                                                          aaGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGc                                                                           >  1:95166/1‑140 (MQ=255)                                                          aaGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGc                                                                           >  2:480027/1‑140 (MQ=255)                                                          aaGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGc                                                                           <  1:884106/140‑1 (MQ=255)                                                          aaGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGc                                                                           >  2:984360/1‑140 (MQ=255)                                                          aaGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGc                                                                           >  1:857950/1‑140 (MQ=255)                                                          aaGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGc                                                                           >  1:728588/1‑140 (MQ=255)                                                          aaGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCA‑TTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCa                                                                          >  1:151772/1‑140 (MQ=255)                                                           aGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCa                                                                          >  2:1296202/1‑140 (MQ=255)                                                            gCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCaa                                                                         >  1:1467417/1‑140 (MQ=255)                                                             ccctgccccGCTGCACGGTGGGCGGTACCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCaaa                                                                        <  2:1248055/134‑1 (MQ=255)                                                              ccAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAAt                                                                       >  2:417001/1‑140 (MQ=255)                                                               cAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATa                                                                      <  2:728588/140‑1 (MQ=255)                                                               cAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATa                                                                      <  1:1090945/140‑1 (MQ=255)                                                                 ggCCCGCTGCNNGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATAcc                                                                    >  2:1380876/1‑140 (MQ=255)                                                                 ggCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATAcc                                                                    >  2:488242/1‑140 (MQ=255)                                                                 ggCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATAcc                                                                    >  1:1100365/1‑140 (MQ=255)                                                                       cTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATAc                                                                     <  2:589211/133‑1 (MQ=255)                                                                       cTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATAc                                                                     >  1:589211/1‑133 (MQ=255)                                                                       cTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGaata                                                              >  1:1164359/1‑140 (MQ=255)                                                                       cTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGaata                                                              >  2:1067308/1‑140 (MQ=255)                                                                                 gTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCt                                                    >  2:1243587/1‑140 (MQ=255)                                                                                 gTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCA‑TTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATAACGGAATAATCAGCAGCTg                                                   <  2:151772/140‑1 (MQ=255)                                                                                      tATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAg                                               <  1:1108986/140‑1 (MQ=255)                                                                                        tCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGc                                             <  1:984360/140‑1 (MQ=255)                                                                                           aaaTAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCcag                                          >  1:1225679/1‑140 (MQ=255)                                                                                           aaaTAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCcag                                          <  1:1294748/140‑1 (MQ=255)                                                                                           aaaTAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCcag                                          <  1:480027/140‑1 (MQ=255)                                                                                           aaaTAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCcag                                          <  1:144207/140‑1 (MQ=255)                                                                                           aaaTAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCcag                                          <  2:819233/140‑1 (MQ=255)                                                                                            aaTAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCcagc                                         <  1:1030747/140‑1 (MQ=255)                                                                                            aaTAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTGTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCcagc                                         <  2:1159929/140‑1 (MQ=255)                                                                                                aCCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCg                                                 >  1:1092056/1‑128 (MQ=255)                                                                                                aCCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCg                                                 <  2:1092056/128‑1 (MQ=255)                                                                                                aCCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGc                                     >  1:1099964/1‑140 (MQ=255)                                                                                                aCCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATAAGCAGCTGCGAGGCCAGCAGGc                                     >  1:1044189/1‑140 (MQ=255)                                                                                                  cGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTa                                   <  1:902123/140‑1 (MQ=255)                                                                                                    ccAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACa                                 <  1:488242/140‑1 (MQ=255)                                                                                                    ccAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACa                                 >  2:1410411/1‑140 (MQ=255)                                                                                                    ccAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACa                                 >  1:1298694/1‑140 (MQ=255)                                                                                                      aaTCAGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACaaa                               >  2:1211464/1‑140 (MQ=255)                                                                                                          aGTTTTGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTa                           <  2:1298694/140‑1 (MQ=255)                                                                                                               tGGTAAGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCtt                      >  1:802043/1‑140 (MQ=255)                                                                                                                   aaGATCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCg                  <  2:1275432/140‑1 (MQ=255)                                                                                                                      aTCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCGGGt               >  1:1095628/1‑140 (MQ=255)                                                                                                                       tCCCGGCGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCGGGtt              <  2:1164359/140‑1 (MQ=255)                                                                                                                             cGATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCGGGTTCccagc        <  2:936278/140‑1 (MQ=255)                                                                                                                              gATCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCGGGTTCccagcc       <  1:650391/140‑1 (MQ=255)                                                                                                                               aTCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCGGGTTCccagcca      <  1:1296202/140‑1 (MQ=255)                                                                                                                               aTCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCGGGTTCccagcca      <  1:1080977/140‑1 (MQ=255)                                                                                                                                tCCCTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCGGGTTCccagccag     >  1:50411/1‑140 (MQ=255)                                                                                                                                   cTTGCCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCGGGTTCCCAGCCAGTCa  <  1:417001/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                        ATCAACGCGCCGATGATTGGGGCCAGTGCACCGCCCAATGCGCCAACGTTGTAGGTAAAGCCCAGGCCCGCTGCACGCTGGTCGGTATCGAAATAACCGCCAATCAGTTTTGGTAAGATCCCGGCGATCCCTTGTCCAAGCATTTGCTGGAAGAACAGTAACAGACCGAGCACCCAGACGTTTGCGCCGCCAATCGCAAATACCGGAATAATCAGCAGCTGCGAGGCCAGCAGGCTACAAACGTACGCTTTGCGGGTTCCCAGCCAGTCA  >  NC_000913/3371301‑3371570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑