BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,637,817	T→C	V59A (GTA→GCA)	pitA →	metal phosphate:H(+) symporter PitA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,637,817	0	T	C	100.0%	438.9 / NA	138	V59A (GTA→GCA)	pitA	metal phosphate:H(+) symporter PitA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (64/74); total (64/74)

Only 100 of 147 total aligned reads displayed.

GCTGTTATTATTGCTTGCACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGTATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGGTGTTCTCTATGTTGCTGGCGGCG  >  NC_000913/3637680‑3637953

gCTGTTATTATTGCTTGCACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCAt                                                                                                                                         >  1:619979/1‑140 (MQ=255)

 cTGTTATTATTGCTTGCACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCAtt                                                                                                                                        >  1:1304867/1‑140 (MQ=255)

  tGTTATTATTGCTTGCACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTc                                                                                                                                       <  1:482176/140‑1 (MQ=255)

     tattatTGCTTGCACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAc                                                                                                                                    >  2:1434429/1‑140 (MQ=255)

              ttgcACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACTCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTgggg                                                                                                                          >  2:1403890/1‑139 (MQ=255)

              ttgcACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTgggg                                                                                                                          >  1:222252/1‑139 (MQ=255)

              ttgcACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGgt                                                                                                                          >  1:56042/1‑140 (MQ=255)

              ttgcACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGgt                                                                                                                          >  1:500652/1‑140 (MQ=255)

              ttgcACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGgt                                                                                                                          >  2:1357106/1‑140 (MQ=255)

                  aCTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGgt                                                                                                                          <  1:26470/136‑1 (MQ=255)

                       cTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACTCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTg                                                                                                                 <  1:1403890/140‑1 (MQ=255)

                         tttGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTggg                                                                                                               <  2:963323/140‑1 (MQ=255)

                         tttGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTggg                                                                                                               <  1:140345/140‑1 (MQ=255)

                                tGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAACTTTTTTGGGGGTTTTG‑TGGGTGGGCTg                                                                                                        >  2:278913/1‑140 (MQ=255)

                                tGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTg                                                                                                        >  2:1119541/1‑140 (MQ=255)

                                    cTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAgtg                                                                                                    <  2:1272690/140‑1 (MQ=255)

                                    cTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAgtg                                                                                                    <  2:571633/140‑1 (MQ=255)

                                      aCGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGtt                                                                                                  <  1:209581/140‑1 (MQ=255)

                                          aGCCATCAATGGTTTCCATGGCACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGTGCTCAAC‑ATTTTGGGAGTTTTGCTGGGGGGGGTGGGTGTTGCCt                                                                                              >  2:1118252/1‑140 (MQ=255)

                                           gCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTa                                                                                             <  1:228129/140‑1 (MQ=255)

                                           gCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTa                                                                                             <  1:161602/140‑1 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACTCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGc                                                                                                >  1:1075227/1‑136 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCCTTCAAC‑TTTTTGGGTGTTTTTCTGGGGGGTCTGAGTGTTGCCTAt                                                                                            >  2:746875/1‑140 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTc                                                                                                          >  1:75031/1‑126 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTc                                                                                                          <  2:75031/126‑1 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTc                                                                                                          <  1:584288/126‑1 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGtt                                                                                                  >  2:1213711/1‑134 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGc                                                                                                <  1:1177949/136‑1 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTa                                                                                             >  2:1189885/1‑139 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTa                                                                                             <  1:1189885/139‑1 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTAt                                                                                            >  2:854760/1‑140 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTAt                                                                                            >  2:360410/1‑140 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTAt                                                                                            >  2:56341/1‑140 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTAt                                                                                            >  2:1338850/1‑140 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGGCTGAGTGTTGCCTAt                                                                                            >  1:774014/1‑140 (MQ=255)

                                            ccATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGCTTTGCTTGGTGGTCTGAGTGTTGCCTAt                                                                                            >  1:1065045/1‑140 (MQ=255)

                                             cATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATg                                                                                           <  1:585852/140‑1 (MQ=255)

                                             cATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATg                                                                                           <  1:854760/140‑1 (MQ=255)

                                             cATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATg                                                                                           <  1:444043/140‑1 (MQ=255)

                                               tCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGcc                                                                                         >  2:1415939/1‑140 (MQ=255)

                                               tCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGGGTTTTTCTGGGTGGGCTGAGTGTTGCCTATGcc                                                                                         >  2:585852/1‑140 (MQ=255)

                                                cAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCa                                                                                        <  1:1415939/140‑1 (MQ=255)

                                                cAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCa                                                                                        <  2:526460/140‑1 (MQ=255)

                                                 aaTGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCAt                                                                                       <  2:7352/140‑1 (MQ=255)

                                                        tCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCat                                                                                <  2:1314434/140‑1 (MQ=255)

                                                             gACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATAtgct                                                                           <  2:774014/140‑1 (MQ=255)

                                                                  agacagcGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGa                                                                      <  1:1098708/134‑1 (MQ=255)

                                                                  aGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTTGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGa                                                                      >  1:32198/1‑140 (MQ=255)

                                                                  aGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCa                                                                                        >  1:686320/1‑122 (MQ=255)

                                                                  aGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCa                                                                                        <  2:686320/122‑1 (MQ=255)

                                                                  aGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGa                                                                      >  1:471420/1‑140 (MQ=255)

                                                                  aGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGa                                                                      >  1:982785/1‑140 (MQ=255)

                                                                    ccAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACg                                                                    >  1:130952/1‑140 (MQ=255)

                                                                        cGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATc                                                                >  2:1286057/1‑140 (MQ=255)

                                                                        cGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATc                                                                <  1:56341/140‑1 (MQ=255)

                                                                         gCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGGGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGGCTATGGCATTTTGCATATTCTGCCGCCgggtgt                                                               >  2:1070938/1‑136 (MQ=255)

                                                                          ccGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATctg                                                              <  2:241910/140‑1 (MQ=255)

                                                                            gTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATctgct                                                            >  2:513913/1‑140 (MQ=255)

                                                                               gCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTgctgct                                                         <  1:515396/140‑1 (MQ=255)

                                                                               gCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTgctgct                                                         >  1:1220382/1‑140 (MQ=255)

                                                                               gCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTgctgct                                                         <  1:360410/140‑1 (MQ=255)

                                                                                cAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTTAAC‑TTTTTGGGTGTTTTGCTGGGGGGTCTGCGTGTTTCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCtt                                                        >  2:1401995/1‑140 (MQ=255)

                                                                                         tCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGa                                               <  1:1338850/140‑1 (MQ=255)

                                                                                          cTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGAt                                              <  1:1465604/140‑1 (MQ=255)

                                                                                          cTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGAt                                              <  1:1318664/140‑1 (MQ=255)

                                                                                          cTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGAt                                              <  1:746875/140‑1 (MQ=255)

                                                                                           tataCCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATc                                             <  2:471420/140‑1 (MQ=255)

                                                                                              aCCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTgctgct                                                         >  2:1160295/1‑125 (MQ=255)

                                                                                              aCCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTgctgct                                                         <  1:1160295/125‑1 (MQ=255)

                                                                                              aCCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGAt                                              <  1:1163744/136‑1 (MQ=255)

                                                                                              aCCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGAt                                              >  2:1163744/1‑136 (MQ=255)

                                                                                              aCCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGtc                                          >  1:1003116/1‑140 (MQ=255)

                                                                                              aCCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGGGTTTTGCTGGGTGGTCTGTGTGTTGCCCATGCCCTTGTGCATATGCTGCCGACGGGTCTGCTGGTTAATATGGGATCGtc                                          >  2:636603/1‑140 (MQ=255)

                                                                                                ccGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTgctgct                                                         <  2:526028/123‑1 (MQ=255)

                                                                                                ccGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTgctgct                                                         >  1:526028/1‑123 (MQ=255)

                                                                                                ccGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGGGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTTCTGCTTAATATGGGATCGtctc                                        >  1:1010900/1‑140 (MQ=255)

                                                                                                   cgcgATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCCTTCAAC‑TTTTTGGGGGGTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGGCGGGTTTGCTGCTTAATATGGGATTGTCTCATg                                     >  2:605021/1‑140 (MQ=255)

                                                                                                   cgcgATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATg                                     >  1:794593/1‑140 (MQ=255)

                                                                                                   cgcgATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATg                                     >  2:82986/1‑140 (MQ=255)

                                                                                                   cgcgATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATg                                     >  1:1415907/1‑140 (MQ=255)

                                                                                                     cgATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGc                                   >  2:1013724/1‑140 (MQ=255)

                                                                                                       aTGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGAt                                              >  2:538199/1‑127 (MQ=255)

                                                                                                       aTGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCt                                 >  1:1263015/1‑140 (MQ=255)

                                                                                                       aTGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCt                                 >  1:1122249/1‑140 (MQ=255)

                                                                                                       aTGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGGGTTTTGCTGGGTGGTCTGAGGGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCt                                 >  2:469955/1‑140 (MQ=255)

                                                                                                         gCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTg                               <  1:1357106/140‑1 (MQ=255)

                                                                                                         gCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTg                               <  1:82986/140‑1 (MQ=255)

                                                                                                            ttCTCAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATTGGATCGTCTCATGGCCTTGCCa                            <  2:500652/140‑1 (MQ=255)

                                                                                                               tcAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATgg                         <  2:1003116/140‑1 (MQ=255)

                                                                                                               tcAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGCTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATgg                         <  2:1065045/140‑1 (MQ=255)

                                                                                                                cAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTTCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGgt                        <  2:1010900/140‑1 (MQ=255)

                                                                                                                cAGCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGgt                        <  1:1124334/140‑1 (MQ=255)

                                                                                                                  gCTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGcc                                  <  1:1339323/128‑1 (MQ=255)

                                                                                                                   cTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGGTGtt                     <  2:222252/140‑1 (MQ=255)

                                                                                                                   cTCGCCGTGGTTATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGGTGtt                     <  1:440365/140‑1 (MQ=255)

                                                                                                                             ttATGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGGTGTTCTCTATGTTg           <  1:86471/140‑1 (MQ=255)

                                                                                                                                tGGCGGCGGCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATAAGGGATCGTCTCATGGCCTTGCCATGGTGTTCTCTATGTTGCTg        >  2:135283/1‑140 (MQ=255)

                                                                                                                                    ggcggcATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGGTGTTCTCTATGTTGCTggcgg    <  2:130952/140‑1 (MQ=255)

                                                                                                                                      cggCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGGTGTTCTCTATGTTGCTGgcggcg  >  2:875366/1‑140 (MQ=255)

                                                                                                                                      cggCATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATAAGGGATCGTCTCATGGCCTTGCCATGGTGTTCTCTATGTTGCTGgcggcg  <  1:135283/140‑1 (MQ=255)

GCTGTTATTATTGCTTGCACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGTATTCAAC‑TTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGGTGTTCTCTATGTTGCTGGCGGCG  >  NC_000913/3637680‑3637953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`