Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,808,983	G→A	L148L (CTG→CTA)	waaA →	KDO transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,808,983	0	G	A	100.0%	269.3 / NA	76	L148L (CTG→CTA)	waaA	KDO transferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (37/39);  total (37/39)

CACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTGGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATGAAGAAGATGGTGCA  >  NC_000913/3808846‑3809106                                                                                                                                          |                                                                                                                            cACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGt                                                                                                                           >  2:879024/1‑140 (MQ=255)  aCGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTg                                                                                                                          >  1:687066/1‑140 (MQ=255)      ttATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCg                                                                                                                      >  1:1113306/1‑140 (MQ=255)         tCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTa                                                                                                                   <  2:386142/140‑1 (MQ=255)          cTGCCGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTaa                                                                                                                  <  1:1136113/140‑1 (MQ=255)              cGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAAcgcg                                                                                                              <  2:58729/140‑1 (MQ=255)              cGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGCAAAATTCCGCTAGTGATCGCTAAcgcg                                                                                                              >  2:1448376/1‑140 (MQ=255)                tATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGCAAAATTCCGCTAGTGATCGCTAAcgcgcg                                                                                                            >  2:396380/1‑140 (MQ=255)                       tGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGActctct                                                                                                     >  2:895553/1‑140 (MQ=255)                       tGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGActctct                                                                                                     >  1:1323023/1‑140 (MQ=255)                          ccGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGCAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGcc                                                                                                  <  1:396380/140‑1 (MQ=255)                              tGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCt                                                                                              <  1:895553/140‑1 (MQ=255)                                   tCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGcc                                                                                         >  1:152083/1‑140 (MQ=255)                                    cAAGCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCg                                                                                        <  1:1089850/140‑1 (MQ=255)                                    cAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCg                                                                                        <  2:687066/140‑1 (MQ=255)                                    cAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCg                                                                                        <  2:819961/140‑1 (MQ=255)                                    cAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACAGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCg                                                                                        <  2:65636/140‑1 (MQ=255)                                        cGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGGCTCTCTGCCCGCt                                                                                              >  1:285290/1‑130 (MQ=255)                                        cGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGGCTCTCTGCCCGCt                                                                                              <  2:285290/130‑1 (MQ=255)                                        cGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGc                                                                                          <  1:230794/134‑1 (MQ=255)                                        cGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGc                                                                                          >  2:230794/1‑134 (MQ=255)                                        cGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAgg                                                                                    <  1:144253/140‑1 (MQ=255)                                             ccTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATg                                                                               >  1:476796/1‑140 (MQ=255)                                               tGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCt                                                                                              <  2:32531/123‑1 (MQ=255)                                               tGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCt                                                                                              >  1:32531/1‑123 (MQ=255)                                               tGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCg                                                                                        <  2:251460/129‑1 (MQ=255)                                               tGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCg                                                                                        >  1:251460/1‑129 (MQ=255)                                               tGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGcc                                                                             >  1:254277/1‑140 (MQ=255)                                                gAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCa                                                                            >  1:805686/1‑140 (MQ=255)                                                 aaTAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCaa                                                                           >  1:21794/1‑140 (MQ=255)                                                 aaTAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCaa                                                                           <  1:879024/140‑1 (MQ=255)                                                  aTAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCaaa                                                                          <  1:403/140‑1 (MQ=255)                                                  aTAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCaaa                                                                          <  2:152083/140‑1 (MQ=255)                                                      aGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTgg                                                                      <  1:896397/140‑1 (MQ=255)                                                           aCCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTggg                                                                     <  1:1234550/136‑1 (MQ=255)                                                           aCCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTggg                                                                     >  2:1234550/1‑136 (MQ=255)                                                           aCCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTaaa                                                                 >  2:1157497/1‑140 (MQ=255)                                                           aCCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTaaa                                                                 >  1:904647/1‑140 (MQ=255)                                                           aCCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTaaa                                                                 >  2:19806/1‑140 (MQ=255)                                                                aaaGTGGTGGTGAGTATGGAAGTCGATTTATGGCCTAACATGATTGCGGCGCTACATAAAGGGAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTcgt                                                            >  2:1199495/1‑140 (MQ=255)                                                                aaaCTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTcgt                                                            <  2:805686/140‑1 (MQ=255)                                                                     ggTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTcgtccgtc                                                       <  1:1053401/140‑1 (MQ=255)                                                                      gtgtTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCg                                                      >  2:855718/1‑140 (MQ=255)                                                                      gtgtTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCg                                                      >  2:1419939/1‑140 (MQ=255)                                                                       tgtTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCTACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGc                                                     >  2:347724/1‑140 (MQ=255)                                                                       tgtTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGc                                                     >  1:1404200/1‑140 (MQ=255)                                                                           gATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTtgc                                                 >  1:554439/1‑140 (MQ=255)                                                                            aTTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTtgct                                                <  2:1404200/140‑1 (MQ=255)                                                                            aTTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTtgct                                                <  1:1419939/140‑1 (MQ=255)                                                                            aTTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTtgct                                                <  2:554439/140‑1 (MQ=255)                                                                               aTGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGcg                                             <  2:1323023/140‑1 (MQ=255)                                                                               aTGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGcg                                             <  2:21794/140‑1 (MQ=255)                                                                                 ggAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTcgtcc                                                          <  1:856025/125‑1 (MQ=255)                                                                                 ggAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTcgtcc                                                          >  2:165931/1‑125 (MQ=255)                                                                                 ggAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTcgtcc                                                          >  2:856025/1‑125 (MQ=255)                                                                                 ggAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTcgtcc                                                          <  1:165931/125‑1 (MQ=255)                                                                                   aaaCCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGcgtcgt                                         <  2:1113306/140‑1 (MQ=255)                                                                                   aaaCCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGcgtcgt                                         >  1:175712/1‑140 (MQ=255)                                                                                    aaCCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTa                                        <  1:855718/140‑1 (MQ=255)                                                                                         aaCTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCt                                                    <  1:639686/123‑1 (MQ=255)                                                                                         aaCTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCt                                                    >  2:639686/1‑123 (MQ=255)                                                                                            tATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTg                                >  2:835146/1‑140 (MQ=255)                                                                                                       cTGATTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCa                     <  2:476796/140‑1 (MQ=255)                                                                                                          aTTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCaaaa                  >  2:4348/1‑140 (MQ=255)                                                                                                          aTTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCaaaa                  >  1:1075771/1‑140 (MQ=255)                                                                                                          aTTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCaaa                   >  1:692702/1‑139 (MQ=255)                                                                                                          aTTGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCaaa                   <  2:692702/139‑1 (MQ=255)                                                                                                           ttGCGGCGCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAAt                 >  1:1181398/1‑140 (MQ=255)                                                                                                               ggcgCTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATgaag             >  1:259664/1‑140 (MQ=255)                                                                                                                 cgcTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATgaagaa           >  1:499262/1‑140 (MQ=255)                                                                                                                   cTACATAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATGAagaaga         <  1:1187379/140‑1 (MQ=255)                                                                                                                        tAAACGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATGAAGAAGATGGTg    <  2:499262/140‑1 (MQ=255)                                                                                                                         aaaCGTAAAATTCCGCTAGTGATCGCTAACGCGCTACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTTATTGCTGCGCAAAATGAAGAAGATGGTGc   <  1:347724/140‑1 (MQ=255)                                                                                                                          aaCGTAAAATTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATGAAGAAGATGGTGCa  <  2:904647/140‑1 (MQ=255)                                                                                                                                aaaTTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATgaa              >  1:1425020/1‑122 (MQ=255)                                                                                                                                aaaTTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATgaa              <  2:1425020/122‑1 (MQ=255)                                                                                                                                 aaTTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCATACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATGAAGAAGATGGTGCa  >  2:1021668/1‑133 (MQ=255)                                                                                                                                 aaTTCCGCTAGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATGAAGAAGATGGTGCa  <  1:1021668/133‑1 (MQ=255)                                                                                                                                          |                                                                                                                            CACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTGGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATGAAGAAGATGGTGCA  >  NC_000913/3808846‑3809106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑