BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,441,374	A→G	intergenic (‑159/+164)	ytfL ← / ← msrA	putative inner membrane protein/methionine sulfoxide reductase A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,441,374	0	A	G	100.0%	384.7 / NA	110	intergenic (‑159/+164)	ytfL/msrA	putative inner membrane protein/methionine sulfoxide reductase A
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (49/61); total (49/61)

Only 100 of 111 total aligned reads displayed.

ATCCTCGGAAGGGGAAGTTGATTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACAGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAGACAAAGAGCACTTTAT  >  NC_000913/4441240‑4441510

aTCCTCGGAAGGGGAAGTTGATTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGa                                                                                                                                     >  1:875753/1‑140 (MQ=255)

aTCCTCGGAAGGGGAAGTTGATTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGa                                                                                                                                     >  2:1356424/1‑140 (MQ=255)

aTCCTCGGAAGGGGAAGTTGATTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGa                                                                                                                                     >  2:583106/1‑140 (MQ=255)

            ggAAGTTGATTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAAc                                                                                                                         >  1:1415675/1‑140 (MQ=255)

              aaGTTGATTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTg                                                                                                                       >  2:190368/1‑140 (MQ=255)

                gTTGATTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGcc                                                                                                                     >  2:1390934/1‑140 (MQ=255)

                  tGATTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTg                                                                                                                   <  2:1327380/140‑1 (MQ=255)

                  tGATTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTg                                                                                                                   <  2:327754/140‑1 (MQ=255)

                  tGATTAATTTGTGTGAAATACAAATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTg                                                                                                                   <  2:182448/140‑1 (MQ=255)

                    aTTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGAt                                                                                                                 <  2:1415675/140‑1 (MQ=255)

                       aaTTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACg                                                                                                              <  1:1390934/140‑1 (MQ=255)

                        aTTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGa                                                                                                                  <  2:1430948/135‑1 (MQ=255)

                         tttGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCt                                                                                                            <  2:1348335/140‑1 (MQ=255)

                         tttGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCt                                                                                                            <  1:1239555/140‑1 (MQ=255)

                            gtgtgAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATg                                                                                                         <  2:882796/140‑1 (MQ=255)

                             tgtgAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTg                                                                                                                   <  1:1389510/129‑1 (MQ=255)

                             tgtgAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTg                                                                                                                   >  2:1389510/1‑129 (MQ=255)

                             tgtgAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGc                                                                                                        >  1:719888/1‑140 (MQ=255)

                             tgtgAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGGATAGCGGAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAAACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGc                                                                                                        >  1:1348630/1‑140 (MQ=255)

                                 aaaTACACATTGAAAGCCGATTCGAAGAGAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGAt                                                                                                    <  2:499063/140‑1 (MQ=255)

                                 aaaTACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTGAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGAt                                                                                                    <  2:1088520/140‑1 (MQ=255)

                                 aaaTACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGAt                                                                                                    <  2:1276320/140‑1 (MQ=255)

                                  aaTACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATc                                                                                                   >  1:921497/1‑140 (MQ=255)

                                  aaTACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATc                                                                                                   >  2:789776/1‑140 (MQ=255)

                                   aTACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCa                                                                                                  <  2:1074391/140‑1 (MQ=255)

                                       acaTTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGcc                                                                                              >  1:770690/1‑140 (MQ=255)

                                       acaTTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGcc                                                                                              >  2:1107185/1‑140 (MQ=255)

                                          ttGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTAc                                                                                           <  1:583106/140‑1 (MQ=255)

                                           tGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGAt                                                                                                    >  2:603796/1‑130 (MQ=255)

                                           tGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGAt                                                                                                    <  1:603796/130‑1 (MQ=255)

                                           tGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACg                                                                                          <  1:1052381/140‑1 (MQ=255)

                                           tGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACg                                                                                          <  1:190368/140‑1 (MQ=255)

                                           tGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACg                                                                                          <  1:1107185/140‑1 (MQ=255)

                                           tGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACg                                                                                          >  2:1052381/1‑140 (MQ=255)

                                           tGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACg                                                                                          <  2:476889/140‑1 (MQ=255)

                                            gAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCGGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGc                                                                                         <  2:209157/140‑1 (MQ=255)

                                            gAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACg                                                                                          <  2:1333117/139‑1 (MQ=255)

                                            gAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACg                                                                                          >  1:1333117/1‑139 (MQ=255)

                                            gAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGc                                                                                         <  2:958992/140‑1 (MQ=255)

                                             aaaGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCa                                                                                        <  2:719888/140‑1 (MQ=255)

                                              aaGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACg                                                                                          >  1:473904/1‑137 (MQ=255)

                                              aaGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAg                                                                                       >  2:231005/1‑140 (MQ=255)

                                              aaGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAg                                                                                       >  1:1451012/1‑140 (MQ=255)

                                               aGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGt                                                                                      <  1:789776/140‑1 (MQ=255)

                                                   gATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCa                                                                                        >  1:832547/1‑134 (MQ=255)

                                                   gATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCa                                                                                        <  2:832547/134‑1 (MQ=255)

                                                   gATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCtt                                                                                  <  2:921497/140‑1 (MQ=255)

                                                   gATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTATAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCtt                                                                                  >  1:750869/1‑140 (MQ=255)

                                                    aTTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTg                                                                                 >  1:108288/1‑140 (MQ=255)

                                                     ttCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGc                                                                                >  2:191224/1‑140 (MQ=255)

                                                           gaaAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAatata                                                                          >  2:30778/1‑140 (MQ=255)

                                                              aGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTg                                                                       >  2:381276/1‑140 (MQ=255)

                                                                 gAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAAt                                                                    <  2:108288/140‑1 (MQ=255)

                                                                       gCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGAc                                                              >  2:63122/1‑140 (MQ=255)

                                                                        cATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACg                                                             <  1:1356424/140‑1 (MQ=255)

                                                                                 tGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAg                                                    <  1:172489/140‑1 (MQ=255)

                                                                                   gCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGc                                                  <  1:1013749/140‑1 (MQ=255)

                                                                                   gCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGc                                                  <  2:398771/140‑1 (MQ=255)

                                                                                        tataGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACTATTTTGTAGGCCTGGt                                             <  1:484180/140‑1 (MQ=255)

                                                                                        tataGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGt                                             <  1:978586/140‑1 (MQ=255)

                                                                                             cGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGc                                                  >  1:1301147/1‑130 (MQ=255)

                                                                                             cGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGc                                                  <  2:1301147/130‑1 (MQ=255)

                                                                                               tAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAg                                                    <  2:1195074/126‑1 (MQ=255)

                                                                                               tAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAg                                                    >  1:1195074/1‑126 (MQ=255)

                                                                                               tAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGt                                      >  2:781736/1‑140 (MQ=255)

                                                                                               tAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGt                                      >  1:311483/1‑140 (MQ=255)

                                                                                                  ggTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTa                                   >  1:71518/1‑140 (MQ=255)

                                                                                                  ggTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTa                                   <  2:1451012/140‑1 (MQ=255)

                                                                                                  ggTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTa                                   >  2:114256/1‑140 (MQ=255)

                                                                                                  ggTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTa                                   >  2:703501/1‑140 (MQ=255)

                                                                                                       tGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTAcgccg                              >  1:1345847/1‑140 (MQ=255)

                                                                                                       tGTAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTAcgccg                              <  2:626389/140‑1 (MQ=255)

                                                                                                         tAAAGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCa                            >  2:449171/1‑140 (MQ=255)

                                                                                                          aaaGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCAt                           <  1:1023483/140‑1 (MQ=255)

                                                                                                          aaaGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCAt                           <  2:750869/140‑1 (MQ=255)

                                                                                                            aGCCGCCAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCa                         >  2:754073/1‑140 (MQ=255)

                                                                                                             gccgccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAg                        >  1:588283/1‑140 (MQ=255)

                                                                                                              ccgccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCAt                           >  1:1065120/1‑136 (MQ=255)

                                                                                                              ccgccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAgg                       >  2:319773/1‑140 (MQ=255)

                                                                                                              ccgccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAgg                       >  1:1347488/1‑140 (MQ=255)

                                                                                                              ccgccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAgg                       >  2:177544/1‑140 (MQ=255)

                                                                                                              ccgccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAgg                       >  1:1245527/1‑140 (MQ=255)

                                                                                                              ccgccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAgg                       <  1:114256/140‑1 (MQ=255)

                                                                                                              ccgccAGAGGGTTAAAATGCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCAt                           <  2:1065120/136‑1 (MQ=255)

                                                                                                               cgccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGc                      <  2:404372/140‑1 (MQ=255)

                                                                                                                gccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCa                     <  1:449171/140‑1 (MQ=255)

                                                                                                                 ccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTAcgc                                >  2:1440234/1‑128 (MQ=255)

                                                                                                                 ccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTAcgc                                <  1:1440234/128‑1 (MQ=255)

                                                                                                                 ccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCAt                    <  2:1347488/140‑1 (MQ=255)

                                                                                                                 ccAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCAt                    >  1:423787/1‑140 (MQ=255)

                                                                                                                  cAGAGGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATa                   <  2:311483/140‑1 (MQ=255)

                                                                                                                   agagGGTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGACCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAg                  >  2:1027448/1‑140 (MQ=255)

                                                                                                                      gggTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAGACa               <  2:770690/140‑1 (MQ=255)

                                                                                                                      gggTTAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAGACa               <  1:781736/140‑1 (MQ=255)

                                                                                                                         ttAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAGACAAag            <  1:30778/140‑1 (MQ=255)

                                                                                                                         ttAAAATTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGAACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAGACAAag            >  2:1089583/1‑140 (MQ=255)

                                                                                                                           aaaaTTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAGACAAagag          <  1:177544/140‑1 (MQ=255)

                                                                                                                            aaaTTCAGACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAGACAAAGAGc         <  2:719673/140‑1 (MQ=255)

                                                                                                                                   gACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAGACAAAGAGCACTTTAt  <  1:191224/140‑1 (MQ=255)

                                                                                                                                   gACGGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAGACAAAGAGCACTTTAt  <  1:319773/140‑1 (MQ=255)

ATCCTCGGAAGGGGAAGTTGATTAATTTGTGTGAAATACACATTGAAAGCCGATTCGAAGAAAGTGAACCGGCATTTTCAGTGGCTAGTATAGCGTAAGGTACTGTAAAGCCGCCAGAGGGTTAAAATTCAGACAGCTGAAAAATGCAAAACTGCCTGATACGCTATGCCGATCAGGCCTACGCAGTCCTTGCAATATATTGAATTTGGACGATTTTGTAGGCCTGGTAAGTCGTTTACGCCGCATCAGGCATAGACAAAGAGCACTTTAT  >  NC_000913/4441240‑4441510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`