BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	476,542	A→G	noncoding (95/114 nt)	ffs →	signal recognition particle 4.5S RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	476,542	0	A	G	100.0%	355.8 / NA	101	noncoding (95/114 nt)	ffs	signal recognition particle 4.5S RNA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (56/45); total (56/45)

Only 100 of 102 total aligned reads displayed.

GCGCCTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTAGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCTGATGAAGT  >  NC_000913/476416‑476678

gcgcCTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAgctgtc                                                                                                                             >  2:939999/1‑135 (MQ=255)

gcgcCTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGccc                                                                                                                             >  2:223879/1‑140 (MQ=255)

gcgcCTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGccc                                                                                                                             >  1:967784/1‑140 (MQ=255)

gcgcCTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGccc                                                                                                                             >  2:1040555/1‑140 (MQ=255)

  gcCTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGcccc                                                                                                                            <  2:1261608/139‑1 (MQ=255)

  gcCTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGcccc                                                                                                                            >  1:1261608/1‑139 (MQ=255)

  gcCTGCGCGTTGATTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGccccc                                                                                                                           <  1:71797/140‑1 (MQ=255)

   ccTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCccca                                                                                                                          >  1:639679/1‑140 (MQ=255)

   ccTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCccca                                                                                                                          >  1:716063/1‑140 (MQ=255)

   ccTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCccca                                                                                                                          >  2:522281/1‑140 (MQ=255)

     tGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCcccac                                                                                                                         >  1:699117/1‑139 (MQ=255)

     tGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCcccac                                                                                                                         <  2:699117/139‑1 (MQ=255)

         cgTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCAtt                                                                                                                    >  1:111067/1‑140 (MQ=255)

         cgTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCAtt                                                                                                                    >  1:539610/1‑140 (MQ=255)

               ttCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGcc                                                                                                              <  1:978855/140‑1 (MQ=255)

                    aaCGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCa                                                                                                         >  1:369676/1‑140 (MQ=255)

                      cGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCAcc                                                                                                       >  1:947209/1‑140 (MQ=255)

                        ctctCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGt                                                                                                     >  1:51863/1‑140 (MQ=255)

                                   ggCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCaaaaa                                                                                          >  1:80847/1‑140 (MQ=255)

                                     ctctGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAAt                                                                                        >  1:908991/1‑140 (MQ=255)

                                     ctctGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAAt                                                                                        >  1:758692/1‑140 (MQ=255)

                                     ctctGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAAt                                                                                        >  2:25090/1‑140 (MQ=255)

                                     ctctGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGACTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAAt                                                                                        >  1:454459/1‑140 (MQ=255)

                                       ctGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATcc                                                                                      >  2:332839/1‑140 (MQ=255)

                                          ttGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCaa                                                                                   <  2:639679/140‑1 (MQ=255)

                                              ttCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATg                                                                               >  2:1235846/1‑140 (MQ=255)

                                               tctcCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATgg                                                                              >  2:966697/1‑140 (MQ=255)

                                                ctcCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGc                                                                             >  2:727679/1‑140 (MQ=255)

                                                  cccGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTa                                                                           >  2:1040928/1‑140 (MQ=255)

                                                  cccGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTa                                                                           >  1:680416/1‑140 (MQ=255)

                                                   ccGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTaa                                                                          >  2:1023164/1‑140 (MQ=255)

                                                            tACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAAcc                                                                 <  1:1023164/140‑1 (MQ=255)

                                                              ctctGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACcac                                                               >  1:242117/1‑140 (MQ=255)

                                                                   tttACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTg                                                          >  2:1366875/1‑140 (MQ=255)

                                                                   tttACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACCTTAACCACAACTg                                                          >  1:259580/1‑140 (MQ=255)

                                                                   tttACCAGGTCAGGTCCAGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTg                                                          >  1:475738/1‑140 (MQ=255)

                                                                    ttACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGa                                                         <  2:51863/140‑1 (MQ=255)

                                                                     tACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGAc                                                        <  1:709143/140‑1 (MQ=255)

                                                                      aCCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACg                                                       >  1:519341/1‑140 (MQ=255)

                                                                        caggtcaggtCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTc                                                     >  1:665271/1‑140 (MQ=255)

                                                                        caggtcaggtCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTc                                                     >  1:1397171/1‑140 (MQ=255)

                                                                          ggtcaggtcCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGc                                                   <  1:25090/140‑1 (MQ=255)

                                                                           gtcaggtcCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCa                                                  >  2:1187620/1‑140 (MQ=255)

                                                                           gtcaggtcCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCa                                                  >  1:490287/1‑140 (MQ=255)

                                                                            tcaggtcCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCaa                                                 >  1:45810/1‑140 (MQ=255)

                                                                            tcaggtcCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCaa                                                 >  1:150836/1‑140 (MQ=255)

                                                                             caggtcCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAg                                                >  1:1278667/1‑140 (MQ=255)

                                                                             caggtcCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAg                                                <  2:1397171/140‑1 (MQ=255)

                                                                             caggtcCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAg                                                >  2:800671/1‑140 (MQ=255)

                                                                                gtcCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGGTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAAt                                             >  1:1337758/1‑140 (MQ=255)

                                                                                gtcCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAAt                                             >  2:294611/1‑140 (MQ=255)

                                                                                  ccagaaggaagCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTg                                           <  2:475738/137‑1 (MQ=255)

                                                                                     gaaggaagCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGttt                                        >  1:992319/1‑138 (MQ=255)

                                                                                     gaaggaagCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCt                                        <  1:1366875/140‑1 (MQ=255)

                                                                                      aaggaagCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTg                                       >  2:1091657/1‑140 (MQ=255)

                                                                                         gaagCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCt                                    <  2:716063/140‑1 (MQ=255)

                                                                                         gaagCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCt                                    <  1:436800/140‑1 (MQ=255)

                                                                                           agcagcCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAg                                                <  1:1098551/126‑1 (MQ=255)

                                                                                           agcagcCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAg                                                >  2:1098551/1‑126 (MQ=255)

                                                                                            gcagcCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTgcg                                 <  1:332839/140‑1 (MQ=255)

                                                                                               gcCAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAg                              <  1:993744/140‑1 (MQ=255)

                                                                                                 cAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTa                            <  1:727679/140‑1 (MQ=255)

                                                                                                 cAAGGCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTa                            <  2:680416/140‑1 (MQ=255)

                                                                                                     gCAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCt                        <  2:242117/140‑1 (MQ=255)

                                                                                                      cAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACg                          <  1:1443098/137‑1 (MQ=255)

                                                                                                      cAGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACg                          >  2:1443098/1‑137 (MQ=255)

                                                                                                       aGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTc                      <  1:1235846/140‑1 (MQ=255)

                                                                                                       aGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTc                      <  2:45810/140‑1 (MQ=255)

                                                                                                       aGATGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTc                      <  2:80847/140‑1 (MQ=255)

                                                                                                         aTGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTgg                                      >  2:74486/1‑122 (MQ=255)

                                                                                                         aTGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTgg                                      <  1:74486/122‑1 (MQ=255)

                                                                                                         aTGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCgg                    >  2:1097299/1‑140 (MQ=255)

                                                                                                          tGACGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGa                   >  1:1318182/1‑140 (MQ=255)

                                                                                                            aCGCGTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAgg                 <  1:800671/140‑1 (MQ=255)

                                                                                                             cgcgTGTGCCGGGATGTGGGTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGt                <  2:1337758/140‑1 (MQ=255)

                                                                                                             cgcgTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGt                <  2:967784/140‑1 (MQ=255)

                                                                                                              gcgTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTa               >  2:1266485/1‑140 (MQ=255)

                                                                                                               cgTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTTAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTAt              <  2:1318182/140‑1 (MQ=255)

                                                                                                               cgTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTAt              <  1:1187620/140‑1 (MQ=255)

                                                                                                               cgTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTAt              >  2:379773/1‑140 (MQ=255)

                                                                                                               cgTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTAt              <  1:522281/140‑1 (MQ=255)

                                                                                                               cgTGTGCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTAt              <  1:98704/140‑1 (MQ=255)

                                                                                                               cgTGTGCCGGGATGTGACTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTAt              <  2:454459/140‑1 (MQ=255)

                                                                                                                   tgCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTa                            <  2:1407027/122‑1 (MQ=255)

                                                                                                                   tgCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTa                            >  1:1407027/1‑122 (MQ=255)

                                                                                                                   tgCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTAt              >  1:1229513/1‑136 (MQ=255)

                                                                                                                   tgCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTAt              <  2:1229513/136‑1 (MQ=255)

                                                                                                                   tgCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCt          <  2:1278667/140‑1 (MQ=255)

                                                                                                                   tgCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCt          >  2:439492/1‑140 (MQ=255)

                                                                                                                   tgCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCt          >  2:345318/1‑140 (MQ=255)

                                                                                                                    gCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCtg         <  1:1097299/140‑1 (MQ=255)

                                                                                                                    gCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCtg         <  1:1091657/140‑1 (MQ=255)

                                                                                                                    gCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCtg         <  1:1040555/140‑1 (MQ=255)

                                                                                                                    gCCGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCtg         <  1:223879/140‑1 (MQ=255)

                                                                                                                      cGGGATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCtgat       <  1:379773/140‑1 (MQ=255)

                                                                                                                       gggATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCtgatg      <  1:1266485/140‑1 (MQ=255)

                                                                                                                       gggATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCtgatg      <  2:758692/140‑1 (MQ=255)

                                                                                                                       gggATGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACCTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCtgatg      <  2:259580/140‑1 (MQ=255)

                                                                                                                          aTGTGGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCTGATGAAg   >  1:1362756/1‑140 (MQ=255)

                                                                                                                           tgtgGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCTGATGAAGt  <  2:1297036/140‑1 (MQ=255)

GCGCCTGCGCGTTGGTTCTCAACGCTCTCAATGGGGGCTCTGTTGGTTCTCCCGCAACGCTACTCTGTTTACCAGGTCAGGTCCGGAAGGAAGCAGCCAAGGCAGATGACGCGTGTGCCGGGATGTAGCTGGCAGGGCCCCCACCCATTTCTGCCTCCCACCGTTTCGTCAAAAAATCCCAACATGGCTAAACTTTAACCACAACTGACGTCGCAAGAATTGTCTGGCTGCGCAGTACGCTTCGGAGGTATGTCTGATGAAGT  >  NC_000913/476416‑476678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`