BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,357,342	A→G	intergenic (‑232/+81)	sapA ← / ← ymjA	putative periplasmic binding protein SapA/DUF2543 domain‑containing protein YmjA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,357,342	0	A	G	100.0%	447.5 / NA	127	intergenic (‑232/+81)	sapA/ymjA	putative periplasmic binding protein SapA/DUF2543 domain‑containing protein YmjA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (59/68); total (59/68)

Only 100 of 129 total aligned reads displayed.

GGTTGGTCGTTGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCAGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTACGGGA  >  NC_000913/1357207‑1357477

    ggtCGTTGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCgtgt                                                                                                                                 <  1:77068/140‑1 (MQ=255)

    ggtCGTTGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCgtgt                                                                                                                                 <  1:224890/140‑1 (MQ=255)

    ggtCGTTGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCgtgt                                                                                                                                 <  2:120780/140‑1 (MQ=255)

    ggtCGTTGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCgtgt                                                                                                                                 >  1:1300897/1‑140 (MQ=255)

    ggtCGTTGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCgtgt                                                                                                                                 <  2:1022551/140‑1 (MQ=255)

    ggtCGTTGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCgtgt                                                                                                                                 <  2:808054/140‑1 (MQ=255)

      tCGTTGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCa                                                                                                                               >  1:148710/1‑140 (MQ=255)

         ttGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTg                                                                                                                            <  1:188761/140‑1 (MQ=255)

         ttGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTg                                                                                                                            >  2:1435912/1‑140 (MQ=255)

                ggTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCa                                                                                                                     >  2:325372/1‑140 (MQ=255)

                    aCGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATg                                                                                                                 >  2:735433/1‑140 (MQ=255)

                           cATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTg                                                                                                          <  1:225166/140‑1 (MQ=255)

                           cATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTg                                                                                                          >  2:958170/1‑140 (MQ=255)

                                        ttCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCg                                                                                             <  1:1380556/140‑1 (MQ=255)

                                        ttCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCg                                                                                             >  1:853457/1‑140 (MQ=255)

                                        ttCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCg                                                                                             <  1:831093/140‑1 (MQ=255)

                                         tCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCgg                                                                                            >  1:1026055/1‑140 (MQ=255)

                                         tCGTACCCGTGATTTCTCTATAACTATAACACACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCt                                                                                                    <  1:595722/132‑1 (MQ=255)

                                           gTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGAc                                                                                          >  1:474694/1‑140 (MQ=255)

                                           gTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGAc                                                                                          >  2:1221238/1‑140 (MQ=255)

                                            tACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACa                                                                                         <  1:153916/140‑1 (MQ=255)

                                             aCCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACaa                                                                                        <  2:464896/140‑1 (MQ=255)

                                              cccGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAAc                                                                                       >  2:574785/1‑140 (MQ=255)

                                               ccGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCg                                                                                             >  1:1329562/1‑133 (MQ=255)

                                               ccGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCg                                                                                             <  2:1329562/133‑1 (MQ=255)

                                                cGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGa                                                                                     >  1:817336/1‑140 (MQ=255)

                                                cGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGa                                                                                     <  1:325372/140‑1 (MQ=255)

                                                 gTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGAt                                                                                    >  2:1099068/1‑140 (MQ=255)

                                                  tGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATa                                                                                   >  2:110674/1‑140 (MQ=255)

                                                  tGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATa                                                                                   <  1:423892/140‑1 (MQ=255)

                                                  tGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATa                                                                                   <  1:110674/140‑1 (MQ=255)

                                                       tctcTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGAc                                                                              <  2:597129/140‑1 (MQ=255)

                                                       tctcTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGAc                                                                              >  2:829346/1‑140 (MQ=255)

                                                         tctATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCg                                                                            >  2:557007/1‑140 (MQ=255)

                                                         tctATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCg                                                                            >  1:62945/1‑140 (MQ=255)

                                                             taactataactCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCg                                                                        >  2:771779/1‑140 (MQ=255)

                                                                 tataactCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTg                                                                    <  2:62945/140‑1 (MQ=255)

                                                                 tataactCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTg                                                                    <  1:1099068/140‑1 (MQ=255)

                                                                  ataactCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGc                                                                   >  2:1463490/1‑140 (MQ=255)

                                                                   taactCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCa                                                                  >  1:1431942/1‑140 (MQ=255)

                                                                   taactCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCa                                                                  >  2:814845/1‑140 (MQ=255)

                                                                   taactCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCa                                                                  >  2:326715/1‑140 (MQ=255)

                                                                     actCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAAt                                                                <  1:574785/140‑1 (MQ=255)

                                                                     actCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTACAAt                                                                >  2:1158239/1‑140 (MQ=255)

                                                                     actCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTACAAt                                                                <  1:1158239/140‑1 (MQ=255)

                                                                         acaGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTaaa                                                            >  2:567308/1‑140 (MQ=255)

                                                                         acaGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTaaa                                                            >  1:1357121/1‑140 (MQ=255)

                                                                         acaGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTaaa                                                            >  1:1293831/1‑140 (MQ=255)

                                                                           aGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtc                                                          >  1:1249730/1‑140 (MQ=255)

                                                                           aGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACAGATCGTCTGCAATTAAAtc                                                          >  1:9643/1‑140 (MQ=255)

                                                                            gAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtca                                                         <  1:735433/140‑1 (MQ=255)

                                                                            gAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtca                                                         <  1:557007/140‑1 (MQ=255)

                                                                             aacaacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGAt                                                                          >  2:403925/1‑122 (MQ=255)

                                                                             aacaacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCt                                                                     >  2:207856/1‑127 (MQ=255)

                                                                             aacaacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcat                                                        <  2:148710/140‑1 (MQ=255)

                                                                             aacaacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcat                                                        <  1:326715/140‑1 (MQ=255)

                                                                             aacaacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcat                                                        <  1:192099/140‑1 (MQ=255)

                                                                             aacaacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcat                                                        >  2:1297777/1‑140 (MQ=255)

                                                                              acaacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcatt                                                       <  1:1110992/140‑1 (MQ=255)

                                                                               caacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcatta                                                      <  1:560238/140‑1 (MQ=255)

                                                                               caacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcatta                                                      <  2:853457/140‑1 (MQ=255)

                                                                               caacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACAGATCGTCTGCAATTAAAtcatta                                                      <  2:9643/140‑1 (MQ=255)

                                                                               caacTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTCATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcatta                                                      <  2:1249730/140‑1 (MQ=255)

                                                                                 acTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcattact                                                    <  1:1463490/140‑1 (MQ=255)

                                                                                 acTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcattact                                                    <  1:771779/140‑1 (MQ=255)

                                                                                 acTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcattact                                                    <  1:958170/140‑1 (MQ=255)

                                                                                   ttAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcattactca                                                  <  1:1257758/140‑1 (MQ=255)

                                                                                          ggagCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTAcccc                                           >  1:426124/1‑140 (MQ=255)

                                                                                           gagCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAAtcat                                                        <  2:1128931/126‑1 (MQ=255)

                                                                                            agCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCAt                                         >  2:548098/1‑140 (MQ=255)

                                                                                            agCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCAt                                         >  1:402881/1‑140 (MQ=255)

                                                                                             gCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCAtt                                        <  2:1431942/140‑1 (MQ=255)

                                                                                                       aCGATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCaaaaa                              <  2:1357121/140‑1 (MQ=255)

                                                                                                         gATCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAAct                            <  1:591791/140‑1 (MQ=255)

                                                                                                           tCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAActct                          <  2:402881/140‑1 (MQ=255)

                                                                                                           tCGTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAActct                          <  2:474694/140‑1 (MQ=255)

                                                                                                             gTGAGAAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGc                        >  1:9115/1‑140 (MQ=255)

                                                                                                                gagacagcATTAAAGCTCGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGAt                     <  1:361934/133‑1 (MQ=255)

                                                                                                                agaAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCaaa                                >  2:572545/1‑129 (MQ=255)

                                                                                                                agaAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAActct                          >  2:203395/1‑135 (MQ=255)

                                                                                                                agaAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAActct                          <  1:203395/135‑1 (MQ=255)

                                                                                                                agaAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAActct                          <  1:1324470/135‑1 (MQ=255)

                                                                                                                agaAACCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGAATCAAAAActct                          >  2:1324470/1‑135 (MQ=255)

                                                                                                                   aaCCCATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGAtctc                  >  2:869522/1‑140 (MQ=255)

                                                                                                                     cccATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAActct                          >  2:1423484/1‑130 (MQ=255)

                                                                                                                     cccATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAActct                          <  1:1423484/130‑1 (MQ=255)

                                                                                                                     cccATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGAtc                    <  1:1321293/136‑1 (MQ=255)

                                                                                                                     cccATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCtcat                >  2:3117/1‑140 (MQ=255)

                                                                                                                       cATTAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCtcatca              <  2:1026055/140‑1 (MQ=255)

                                                                                                                         ttAAAGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAAt            <  2:9115/140‑1 (MQ=255)

                                                                                                                             aGCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGt        <  2:426124/140‑1 (MQ=255)

                                                                                                                              gCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTa       <  1:548098/140‑1 (MQ=255)

                                                                                                                              gCACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTa       <  1:3117/140‑1 (MQ=255)

                                                                                                                               cACGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTa       >  1:1455542/1‑139 (MQ=255)

                                                                                                                                aCGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTa       >  2:656542/1‑138 (MQ=255)

                                                                                                                                aCGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTACg     <  2:517339/140‑1 (MQ=255)

                                                                                                                                aCGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTACg     >  1:816152/1‑140 (MQ=255)

                                                                                                                                 cGCTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTa       <  1:1202952/137‑1 (MQ=255)

                                                                                                                                   cTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTACGGGa  >  2:1167153/1‑140 (MQ=255)

                                                                                                                                   cTGCGGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTACGGGa  >  1:11967/1‑140 (MQ=255)

GGTTGGTCGTTGAACAGGTGACGTCGCCATCTGTTCAACATTCGTACCCGTGATTTCTCTATAACTATAACTCACAGAACAACTTAGCGAGGAGCAGAGCGGTACGATCGTGAGAAACCCATTAAAGCACGCTGCAGTGCGTGTCATTGTTAGCCAGATGCGGCGTGAACGCTTTATCCGGACAACGATACTGACCGATCGTCTGCAATTAAATCATTACTCATTACCCCATTGATTCAAAAACTCTGCGATCTCATCAATGCGTACGGGA  >  NC_000913/1357207‑1357477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`