BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,648,247	A→G	D105G (GAT→GGT)	dicA →	DNA‑binding transcriptional dual regulator DicA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,648,247	0	A	G	100.0%	363.9 / NA	103	D105G (GAT→GGT)	dicA	DNA‑binding transcriptional dual regulator DicA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (56/47); total (56/47)

Only 100 of 103 total aligned reads displayed.

CAATGCTCACCAACATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATG  >  NC_000913/1648111‑1648378

cAATGCTCACCAACATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTAc                                                                                                                                  >  1:1468014/1‑140 (MQ=255)

  aTGCTCACCAACATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTAccc                                                                                                                                >  2:688835/1‑140 (MQ=255)

     cTCACCAACATGGATTCTATTTGGCGATGAAGACAGGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGc                                                                                                                             >  2:1433719/1‑140 (MQ=255)

     cTCACCAACATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGc                                                                                                                             >  2:271535/1‑140 (MQ=255)

     cTCACCAACATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGc                                                                                                                             >  1:543156/1‑140 (MQ=255)

     cTCACCAACATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGc                                                                                                                             >  2:230958/1‑140 (MQ=255)

          cAACATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGcc                                                                                                                        >  1:116548/1‑140 (MQ=255)

           aaCATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCg                                                                                                                       <  1:230958/140‑1 (MQ=255)

             cATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGaa                                                                                                                     >  1:146424/1‑140 (MQ=255)

               tGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAAt                                                                                                                   >  2:1428281/1‑140 (MQ=255)

                    tCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAg                                                                                                              <  2:459722/140‑1 (MQ=255)

                     cTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGc                                                                                                             <  2:543156/140‑1 (MQ=255)

                           ggCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTc                                                                                                           <  2:1456179/136‑1 (MQ=255)

                           ggCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTc                                                                                                           >  1:1456179/1‑136 (MQ=255)

                                tGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTaaaaa                                                                                                  >  1:812252/1‑140 (MQ=255)

                                tGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTaaaaa                                                                                                  >  2:1329908/1‑140 (MQ=255)

                                tGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTaaaaa                                                                                                  >  2:155490/1‑140 (MQ=255)

                                tGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTaaaaa                                                                                                  >  2:775388/1‑140 (MQ=255)

                                tGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTaaaaa                                                                                                  >  1:212105/1‑140 (MQ=255)

                                 gAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTaaaaaa                                                                                                 <  1:992140/140‑1 (MQ=255)

                                  aaGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAAc                                                                                                <  2:253611/140‑1 (MQ=255)

                                   aGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACt                                                                                               <  1:1358509/140‑1 (MQ=255)

                                         gCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATa                                                                                         >  1:812158/1‑140 (MQ=255)

                                          caaccaacACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATaa                                                                                        <  2:212105/140‑1 (MQ=255)

                                            accaacACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAAc                                                                                      >  2:595383/1‑140 (MQ=255)

                                                  accaccTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTg                                                                                <  1:271535/140‑1 (MQ=255)

                                                  accaccTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTg                                                                                <  2:1286305/140‑1 (MQ=255)

                                                   ccaccTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTga                                                                               >  1:1207444/1‑140 (MQ=255)

                                                    caccTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTgaa                                                                              >  2:758101/1‑140 (MQ=255)

                                                    caccTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTgaa                                                                              >  1:1042212/1‑140 (MQ=255)

                                                      ccTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTgaaga                                                                            >  2:768971/1‑140 (MQ=255)

                                                       cTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTgaagaa                                                                           <  1:688835/140‑1 (MQ=255)

                                                       cTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTgaagaa                                                                           >  1:1223905/1‑140 (MQ=255)

                                                           tGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTAc                                                                       >  2:1353735/1‑140 (MQ=255)

                                                           tGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTAc                                                                       >  1:985080/1‑140 (MQ=255)

                                                            gagaAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACt                                                                      <  2:1223905/140‑1 (MQ=255)

                                                                  ccAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTg                                                                                <  2:237939/124‑1 (MQ=255)

                                                                  ccAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTg                                                                                >  1:237939/1‑124 (MQ=255)

                                                                            tATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCgg                                                      >  2:1024770/1‑140 (MQ=255)

                                                                             aTCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGa                                                     <  2:116548/140‑1 (MQ=255)

                                                                              tCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGAc                                                    >  2:932037/1‑140 (MQ=255)

                                                                                ccccAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACaa                                                  >  2:403071/1‑140 (MQ=255)

                                                                                   cAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATa                                               >  1:816298/1‑140 (MQ=255)

                                                                                   cAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATa                                               >  2:347932/1‑140 (MQ=255)

                                                                                   cAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATa                                               <  1:768971/140‑1 (MQ=255)

                                                                                         aCTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGAt                                         <  1:758101/140‑1 (MQ=255)

                                                                                         aCTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGAt                                         <  1:1329908/140‑1 (MQ=255)

                                                                                         aCTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGAt                                         <  2:1468014/140‑1 (MQ=255)

                                                                                         aCTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGAt                                         <  1:430082/140‑1 (MQ=255)

                                                                                         aCTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGAt                                         <  2:501803/140‑1 (MQ=255)

                                                                                             gagCTTCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAca                                     >  1:1391086/1‑140 (MQ=255)

                                                                                             gagCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAca                                     >  2:1125366/1‑140 (MQ=255)

                                                                                             gagCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAca                                     >  1:1433810/1‑140 (MQ=255)

                                                                                             gagCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAca                                     <  1:158857/140‑1 (MQ=255)

                                                                                             gagCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAca                                     <  1:932037/140‑1 (MQ=255)

                                                                                             gagCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCACGTCAGCGGACAAATAAAAGATAAca                                     <  1:1101938/140‑1 (MQ=255)

                                                                                                 tCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAcatcat                                 >  2:539516/1‑140 (MQ=255)

                                                                                                  ccTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAca                                     <  1:304865/135‑1 (MQ=255)

                                                                                                  ccTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAca                                     >  2:304865/1‑135 (MQ=255)

                                                                                                  ccTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACatcatc                                >  2:1074306/1‑140 (MQ=255)

                                                                                                  ccTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACatcatc                                >  2:500026/1‑140 (MQ=255)

                                                                                                   cTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACAtcatca                               <  2:816298/140‑1 (MQ=255)

                                                                                                        gCTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAg                          >  2:179824/1‑140 (MQ=255)

                                                                                                         cTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGt                         <  2:570971/140‑1 (MQ=255)

                                                                                                         cTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGt                         >  2:450767/1‑140 (MQ=255)

                                                                                                         cTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGt                         <  2:1042212/140‑1 (MQ=255)

                                                                                                         cTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGt                         <  1:347932/140‑1 (MQ=255)

                                                                                                         cTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGt                         >  2:121628/1‑140 (MQ=255)

                                                                                                         cTGTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAACAAAAGATAACATCATCAATGAGt                         <  2:812252/140‑1 (MQ=255)

                                                                                                           gTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAcatca                                  <  1:420625/129‑1 (MQ=255)

                                                                                                           gTTTAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAAcatca                                  >  2:420625/1‑129 (MQ=255)

                                                                                                            tttAATGCACTGCCAGAATCAGATCAGGGTATCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACAtcatca                               <  2:1305096/131‑1 (MQ=255)

                                                                                                            tttAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACAtcatca                               >  1:1305096/1‑131 (MQ=255)

                                                                                                            tttAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTAt                      >  1:103005/1‑140 (MQ=255)

                                                                                                             ttAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAg                          <  2:1375769/135‑1 (MQ=255)

                                                                                                             ttAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAg                          >  1:1375769/1‑135 (MQ=255)

                                                                                                             ttAATGCACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATc                     >  1:461113/1‑140 (MQ=255)

                                                                                                                   cACTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTAc               <  2:763762/140‑1 (MQ=255)

                                                                                                                     cTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACca             <  1:1452014/140‑1 (MQ=255)

                                                                                                                     cTGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACca             <  1:179824/140‑1 (MQ=255)

                                                                                                                      tGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTa                       <  1:944655/129‑1 (MQ=255)

                                                                                                                      tGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACcac            <  1:1024770/140‑1 (MQ=255)

                                                                                                                      tGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACcac            >  1:1123508/1‑140 (MQ=255)

                                                                                                                      tGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACcac            >  1:627634/1‑140 (MQ=255)

                                                                                                                      tGCCAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACcac            >  1:1468043/1‑140 (MQ=255)

                                                                                                                        ccAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACAt          >  2:676882/1‑140 (MQ=255)

                                                                                                                        ccAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACAt          >  1:373460/1‑140 (MQ=255)

                                                                                                                        ccAGAATCAGAACAGGGTACCCAGCTCGCCGAAATGCCAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACAt          >  2:1313382/1‑140 (MQ=255)

                                                                                                                           gAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACcaca           >  2:1294898/1‑136 (MQ=255)

                                                                                                                           gAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACcaca           <  1:1294898/136‑1 (MQ=255)

                                                                                                                           gAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCaa       <  1:55925/140‑1 (MQ=255)

                                                                                                                           gAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCaa       <  1:1125366/140‑1 (MQ=255)

                                                                                                                           gAATCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCaa       <  1:539516/140‑1 (MQ=255)

                                                                                                                             aTCAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAAtt     >  1:622983/1‑140 (MQ=255)

                                                                                                                               cAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTAt   <  2:146424/140‑1 (MQ=255)

                                                                                                                               cAGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTAt   <  1:1074306/140‑1 (MQ=255)

                                                                                                                                aGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATg  <  2:380363/140‑1 (MQ=255)

                                                                                                                                aGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATg  <  2:1123508/140‑1 (MQ=255)

                                                                                                                                aGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATg  >  2:770148/1‑140 (MQ=255)

                                                                                                                                aGAACAGGGTACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATg  <  2:1207444/140‑1 (MQ=255)

CAATGCTCACCAACATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAACATCATCAATGAGTTATCTTTTACCACATCAATTATG  >  NC_000913/1648111‑1648378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`