BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,761,725	T→C	T23A (ACA→GCA)	sufD ←	Fe‑S cluster scaffold complex subunit SufD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,761,725	0	T	C	100.0%	402.9 / NA	115	T23A (ACA→GCA)	sufD	Fe‑S cluster scaffold complex subunit SufD
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (63/52); total (63/52)

Only 100 of 115 total aligned reads displayed.

TCCCGCAATGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGTCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTCCCTGATATAGCA  >  NC_000913/1761591‑1761860

tcCCGCAATGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCtt                                                                                                                                    >  2:1431/1‑140 (MQ=255)

tcCCGCAATGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCtt                                                                                                                                    <  1:121969/140‑1 (MQ=255)

  ccGCAATGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCa                                                                                                                                  >  2:803504/1‑140 (MQ=255)

     cAATGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGCCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCt                                                                                                                               >  2:592212/1‑140 (MQ=255)

      aaTGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCtt                                                                                                                              <  2:743714/140‑1 (MQ=255)

        tGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCa                                                                                                                            >  2:184597/1‑140 (MQ=255)

        tGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCa                                                                                                                            >  1:24000/1‑140 (MQ=255)

        tGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCa                                                                                                                            >  2:166667/1‑140 (MQ=255)

        tGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCa                                                                                                                            >  1:803682/1‑140 (MQ=255)

        tGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCa                                                                                                                            >  2:557600/1‑140 (MQ=255)

          cTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCaaa                                                                                                                          <  1:857884/140‑1 (MQ=255)

             aCAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACaa                                                                                                                       >  1:1383740/1‑140 (MQ=255)

                aaCTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTg                                                                                                                    >  1:749072/1‑140 (MQ=255)

                  cTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGa                                                                                                                   <  2:1086421/139‑1 (MQ=255)

                  cTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGa                                                                                                                   >  1:1086421/1‑139 (MQ=255)

                  cTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGAt                                                                                                                  >  1:659052/1‑140 (MQ=255)

                              cAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCa                                                                                                      <  1:959831/140‑1 (MQ=255)

                               aGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAg                                                                                                     <  2:1383740/140‑1 (MQ=255)

                               aGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAg                                                                                                     >  1:240141/1‑140 (MQ=255)

                               aGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAg                                                                                                     <  1:184597/140‑1 (MQ=255)

                               aGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAg                                                                                                     >  1:1060604/1‑140 (MQ=255)

                               aGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAg                                                                                                     >  1:1104944/1‑140 (MQ=255)

                               aGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAg                                                                                                     >  2:73994/1‑140 (MQ=255)

                               aGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGAGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAg                                                                                                     <  2:1310737/140‑1 (MQ=255)

                                 cccTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAgcg                                                                                                   >  1:304216/1‑140 (MQ=255)

                                    ttCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAg                                                                                                     <  1:300379/135‑1 (MQ=255)

                                    ttCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAg                                                                                                     >  2:300379/1‑135 (MQ=255)

                                    ttCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGt                                                                                                >  2:672379/1‑140 (MQ=255)

                                    ttCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGt                                                                                                >  2:308502/1‑140 (MQ=255)

                                      ccAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTa                                                                                              >  2:768329/1‑140 (MQ=255)

                                         gcggcgTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTActg                                                                                           >  2:408869/1‑140 (MQ=255)

                                         gcggcgTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTActg                                                                                           <  1:803504/140‑1 (MQ=255)

                                          cggcgTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTActgc                                                                                          >  1:507551/1‑140 (MQ=255)

                                           ggcgTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTTCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTActgct                                                                                         >  1:603937/1‑140 (MQ=255)

                                            gcgTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTActgctg                                                                                        <  2:803682/140‑1 (MQ=255)

                                                     tCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAag                                                                               <  1:1394956/140‑1 (MQ=255)

                                                       cAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAagcc                                                                             >  2:1348638/1‑140 (MQ=255)

                                                       cAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAagcc                                                                             >  1:896823/1‑140 (MQ=255)

                                                       cAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAagcc                                                                             >  2:1177479/1‑140 (MQ=255)

                                                       cAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAagcc                                                                             >  2:864171/1‑140 (MQ=255)

                                                       cAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAagcc                                                                             >  1:169161/1‑140 (MQ=255)

                                                       cAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAagcc                                                                             <  1:1431/140‑1 (MQ=255)

                                                         gTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTActgc                                                                                          >  1:1231296/1‑125 (MQ=255)

                                                         gTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTActgc                                                                                          <  2:1231296/125‑1 (MQ=255)

                                                          ttttCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAagccagc                                                                          <  1:1177479/140‑1 (MQ=255)

                                                          ttttCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAagccagc                                                                          <  1:864171/140‑1 (MQ=255)

                                                            ttCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAgccagcca                                                                        >  1:883594/1‑140 (MQ=255)

                                                            ttCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAgccagcca                                                                        >  1:487125/1‑140 (MQ=255)

                                                             tCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCAt                                                                       >  1:1382400/1‑140 (MQ=255)

                                                             tCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCAt                                                                       <  2:1294142/140‑1 (MQ=255)

                                                              cATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATa                                                                      >  2:1186961/1‑140 (MQ=255)

                                                                 gTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAAcc                                                                   <  2:169161/140‑1 (MQ=255)

                                                                  tttACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAAccc                                                                  <  2:487125/140‑1 (MQ=255)

                                                                     aCGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGc                                                               <  1:1214447/140‑1 (MQ=255)

                                                                     aCGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGc                                                               <  1:768329/140‑1 (MQ=255)

                                                                          tCGCCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGctcctc                                                          >  2:575483/1‑140 (MQ=255)

                                                                                 tCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAgttgt                                                   >  2:433138/1‑140 (MQ=255)

                                                                                      tACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGAc                                              <  2:1104944/140‑1 (MQ=255)

                                                                                       aCGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGAcc                                             <  1:1394011/140‑1 (MQ=255)

                                                                                           agcaATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACg                                         >  2:652614/1‑140 (MQ=255)

                                                                                           agcaATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACg                                         >  1:1194436/1‑140 (MQ=255)

                                                                                           agcaATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACg                                         >  1:920560/1‑140 (MQ=255)

                                                                                           agcaATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACg                                         >  1:1004954/1‑140 (MQ=255)

                                                                                           agcaATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACg                                         >  2:1429722/1‑140 (MQ=255)

                                                                                           agcaATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACg                                         >  1:371432/1‑140 (MQ=255)

                                                                                             caATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGAcc                                             <  2:602423/134‑1 (MQ=255)

                                                                                             caATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGAcc                                             >  1:612887/1‑134 (MQ=255)

                                                                                             caATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGAcc                                             >  1:602423/1‑134 (MQ=255)

                                                                                               aTTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGaa                                     >  1:1080779/1‑140 (MQ=255)

                                                                                                  gttgtAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTA‑‑‑‑AGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCg                              <  2:1128142/140‑1 (MQ=255)

                                                                                                        aaTGCTGCTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGa                            <  1:672379/140‑1 (MQ=255)

                                                                                                          tgctgcTGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGAtt                          >  1:587401/1‑140 (MQ=255)

                                                                                                           gctgctGTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGAttt                         <  1:652614/140‑1 (MQ=255)

                                                                                                            ctgctgTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTc                        <  2:659052/140‑1 (MQ=255)

                                                                                                             tgctgTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTca                       >  1:1352939/1‑140 (MQ=255)

                                                                                                              gctgTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTcac                      >  1:759389/1‑140 (MQ=255)

                                                                                                               ctgTGCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTcaca                     >  1:519443/1‑140 (MQ=255)

                                                                                                                  tgCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAAtt                  <  2:170757/140‑1 (MQ=255)

                                                                                                                  tgCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAAtt                  >  1:448971/1‑140 (MQ=255)

                                                                                                                  tgCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAAtt                  <  2:1382400/140‑1 (MQ=255)

                                                                                                                  tgCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAAtt                  <  2:478542/140‑1 (MQ=255)

                                                                                                                   gCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTc                 <  2:507551/140‑1 (MQ=255)

                                                                                                                   gCTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTc                 <  2:587401/140‑1 (MQ=255)

                                                                                                                    cTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAAt                   <  2:1351283/137‑1 (MQ=255)

                                                                                                                    cTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAAt                   >  1:1351283/1‑137 (MQ=255)

                                                                                                                    cTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCg                >  2:147924/1‑140 (MQ=255)

                                                                                                                    cTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCg                >  1:999237/1‑140 (MQ=255)

                                                                                                                    cTTGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCg                >  1:80446/1‑140 (MQ=255)

                                                                                                                     ttGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGt               <  2:883594/140‑1 (MQ=255)

                                                                                                                     ttGCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCATGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGt               <  1:1348638/140‑1 (MQ=255)

                                                                                                                       gCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTcc             >  2:670554/1‑140 (MQ=255)

                                                                                                                       gCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTcc             <  1:1444995/140‑1 (MQ=255)

                                                                                                                       gCGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTcc             >  1:698387/1‑140 (MQ=255)

                                                                                                                        cGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTccc            <  2:603937/140‑1 (MQ=255)

                                                                                                                        cGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTccc            <  1:546270/140‑1 (MQ=255)

                                                                                                                        cGGGGAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTccc            <  2:80446/140‑1 (MQ=255)

                                                                                                                          gggAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTCCCTg          <  2:690012/140‑1 (MQ=255)

                                                                                                                           ggAGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTCCCTGa         <  1:308502/140‑1 (MQ=255)

                                                                                                                             aGCGTTTTGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTCCCTGata       <  1:557600/140‑1 (MQ=255)

                                                                                                                                  tttGCCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTCCCTGATATAGca  <  2:1194436/140‑1 (MQ=255)

TCCCGCAATGCTGACAAACTGGCTATTGATCAGCCCTTCCAGCGGCGTATATTTCCAGTTTTCATGTTTACGTGTCGGCAGTCCGGTACGCAGCAATTGTTGTAAATGCTGCTGTGCTTGCGGGGAGCGTTTTGTCCCTTCAGCTTCAAACAAGTGATGCCACTGTTGCAGCGCGTTACTGCTGTTCGGTAAGCCAGCCATAACCCTGCTCCTCCAGTTGTTTGACCAACGTGAAATCGCCGGATTTCACAATTCGTCCCTGATATAGCA  >  NC_000913/1761591‑1761860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`