Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,096,988	(A)8→7	intergenic (+159/+577)	ycdU → / ← serX	uncharacterized protein YcdU/tRNA‑Ser

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,096,981	0	A	.	100.0%	308.0 / NA	76	intergenic (+152/+584)	ycdU/serX	uncharacterized protein YcdU/tRNA‑Ser
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (42/34);  total (42/34)

ACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGG  >  NC_000913/1096847‑1097087                                                                                                                                       |                                                                                                           aCCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaaa                                                                                                       >  2:1093523/1‑140 (MQ=255)    aGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGACACCCGGTGTGTGCAATATACGaaaaaaagc                                                                                                    <  1:794778/140‑3 (MQ=255)      ataataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaaaagccc                                                                                                  <  2:1098853/140‑5 (MQ=255)      ataataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaaaagccc                                                                                                  <  2:957220/140‑5 (MQ=255)       taataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCg                                                                                                <  1:1093523/140‑1 (MQ=255)             atatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACttt                                                                                          >  2:202921/1‑140 (MQ=255)               atatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCg                                                                                        >  1:701866/1‑140 (MQ=255)               atatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCg                                                                                        >  1:586250/1‑140 (MQ=255)                tatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCTCGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGt                                                                                       >  1:582276/1‑140 (MQ=255)                tatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaaaagccc                                                                                                  <  2:514566/130‑5 (MQ=255)                tatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaaaagccc                                                                                                  >  1:514566/1‑126 (MQ=255)                tatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaaaagccc                                                                                                  <  2:437758/130‑5 (MQ=255)                tatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaaaagccc                                                                                                  >  1:437758/1‑126 (MQ=255)                tatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGt                                                                                       >  2:114679/1‑140 (MQ=255)                tatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGt                                                                                       >  1:260303/1‑140 (MQ=255)                tatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGt                                                                                       >  1:1117923/1‑140 (MQ=255)                tatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGt                                                                                       >  1:654266/1‑140 (MQ=255)                tatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCATAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGt                                                                                       >  1:1161299/1‑140 (MQ=255)                   gTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACg                                                                                    >  2:686511/1‑140 (MQ=255)                    ttCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGa                                                                                   >  1:375220/1‑140 (MQ=255)                    ttCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGa                                                                                   >  2:553683/1‑140 (MQ=255)                    ttCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGa                                                                                   >  1:713742/1‑140 (MQ=255)                    ttCTGTACTCTCTTGCGCATTATGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGa                                                                                   >  2:864991/1‑140 (MQ=255)                       tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  1:924762/140‑1 (MQ=255)                       tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  2:586250/140‑1 (MQ=255)                       tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  1:137751/140‑1 (MQ=255)                       tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                >  2:490609/1‑140 (MQ=255)                       tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  2:654266/140‑1 (MQ=255)                       tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  1:114679/140‑1 (MQ=255)                       tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  1:312846/140‑1 (MQ=255)                       tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  1:192346/140‑1 (MQ=255)                       tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  2:233868/140‑1 (MQ=255)                         tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGt                                                                                       >  1:529266/1‑131 (MQ=255)                         tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGt                                                                                       <  2:529266/131‑1 (MQ=255)                         tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGctct                                                                              >  2:1134372/1‑140 (MQ=255)                         tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGctct                                                                              >  1:144573/1‑140 (MQ=255)                         tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGctct                                                                              >  2:665276/1‑140 (MQ=255)                         tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGctct                                                                              >  1:240294/1‑140 (MQ=255)                         tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACACTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGctct                                                                              <  2:1084727/140‑1 (MQ=255)                              tctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGctc                                                                               <  2:512353/134‑1 (MQ=255)                              tctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGctc                                                                               >  1:512353/1‑134 (MQ=255)                              tctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  1:883068/133‑1 (MQ=255)                              tctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  1:614580/133‑1 (MQ=255)                              tctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                >  2:614580/1‑133 (MQ=255)                              tctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                >  2:883068/1‑133 (MQ=255)                                ttGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaa                                                                       >  2:943398/1‑140 (MQ=255)                                   cgcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  2:447613/128‑1 (MQ=255)                                   cgcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                >  1:447613/1‑128 (MQ=255)                                   cgcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAata                                                                    >  1:897656/1‑140 (MQ=255)                                   cgcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAata                                                                    >  1:147910/1‑140 (MQ=255)                                        tttGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGTGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCg                                                               >  2:968271/1‑140 (MQ=255)                                        tttGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                >  2:609478/1‑123 (MQ=255)                                        tttGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGct                                                                                <  1:609478/123‑1 (MQ=255)                                        tttGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCg                                                               <  2:191084/140‑1 (MQ=255)                                        tttGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCg                                                               >  2:225611/1‑140 (MQ=255)                                        tttGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCg                                                               >  1:485796/1‑140 (MQ=255)                                        ttcgATTGTTGACTGAGTAACCAGACAGTTCATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCg                                                               <  2:720004/137‑1 (MQ=255)                                          tGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGt                                                             <  2:234485/140‑1 (MQ=255)                                          tGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGt                                                             <  2:260303/140‑1 (MQ=255)                                          tGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGt                                                             <  1:948531/140‑1 (MQ=255)                                               gttgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggg                                                        <  1:277517/140‑1 (MQ=255)                                                ttgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAACTCTTCTTTAAATATGGCGGTGAgggg                                                       >  1:899271/1‑140 (MQ=255)                                                    cTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGa                                                   <  2:144573/140‑1 (MQ=255)                                                      gAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGagt                                                 >  2:495119/1‑138 (MQ=255)                                                        gTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGa                                               >  1:212016/1‑140 (MQ=255)                                                            ccAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGTGGGGGGGGtttaaccc                                           >  1:55442/1‑134 (MQ=25)                                                             cAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgc                                          <  1:1041516/140‑1 (MQ=255)                                                             cAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgc                                          <  1:490609/140‑1 (MQ=255)                                                                 cAGTTGATATGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGATGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGACtcgcttcc                                      >  2:1077264/1‑139 (MQ=21)                                                                    ttGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGACACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGGTGAATCGCTtcgctc                                   >  2:439254/1‑140 (MQ=21)                                                                     tGATGTGCACGATTTCCCCTCGCCCTAACAGACGAGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGGCGCCCTtcgctcc                                  >  2:1041516/1‑139 (MQ=21)                                                                      gATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCGCTtcgctccc                                 >  1:143143/1‑138 (MQ=255)                                                                      gATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGACCCGCTtcgcccgc                                 >  2:138079/1‑140 (MQ=21)                                                                        tgtgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGACTCGCTTCTCTCcccc                               >  2:626365/1‑140 (MQ=21)                                                                         gtgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTTAAGGGGGGAATGTCACCCCTTGCTCGcccc                              >  1:688720/1‑139 (MQ=18)                                                                               gATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGc                        <  2:240294/140‑1 (MQ=255)                                                                               gATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGc                        <  2:582276/140‑1 (MQ=255)                                                                                      ccTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGc                 <  1:943398/140‑1 (MQ=255)                                                                                           cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCAGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACt            <  2:701866/140‑1 (MQ=255)                                                                                           cccTAACAGACGTGGGCGGGGACACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACt            <  1:439254/140‑1 (MQ=255)                                                                                                 cAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTc      <  2:225653/140‑1 (MQ=255)                                                                                                 cAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTc      <  2:212016/140‑1 (MQ=255)                                                                                                    aCGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg   <  1:318409/140‑1 (MQ=255)                                                                                                    aCGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg   <  2:1172996/140‑1 (MQ=255)                                                                                                     cGTGGGCGGGGGCACCCGGTGTGTGCAATATACG‑AAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGCGGGGGTGACTCGCTTCGCTCGCCCCCCGGGCGGCCCCCCCACCGCGGTCACgg  >  2:1022457/1‑140 (MQ=14)                                                                                                                                       |                                                                                                           ACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGG  >  NC_000913/1096847‑1097087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑