BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	571,977	C→T	P175L (CCC→CTC)	ybcM →	DLP12 prophage; putative DNA‑binding transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	571,977	0	C	T	100.0%	381.7 / NA	106	P175L (CCC→CTC)	ybcM	DLP12 prophage; putative DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (57/49); total (57/49)

Only 100 of 106 total aligned reads displayed.

CTCAACTAAAATTCAGGAGCACTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTC  >  NC_000913/571843‑572112

ctcAACTAAAATTCAGGAGCACTTAGCAATGGGGGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGca                                                                                                                                    >  2:763762/1‑140 (MQ=255)

ctcAACTAAAATTCAGGAGCACTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGca                                                                                                                                    <  2:638149/140‑1 (MQ=255)

      tAAAATTCAGGAGCACTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGcaca                                                                                                                                  >  1:818389/1‑136 (MQ=255)

      tAAAATTCAGGAGCACTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGcaca                                                                                                                                  <  2:818389/136‑1 (MQ=255)

          aTTCAGGAGCACTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGAc                                                                                                                          <  1:449100/140‑1 (MQ=255)

           ttCAGGAGCACTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACa                                                                                                                         <  1:134906/140‑1 (MQ=255)

           ttCAGGAGCACTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACa                                                                                                                         <  2:740471/140‑1 (MQ=255)

                     cTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCaaa                                                                                                                    >  2:261492/1‑135 (MQ=255)

                     cTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCaaa                                                                                                                    <  1:261492/135‑1 (MQ=255)

                        aGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTg                                                                                                            >  2:795518/1‑140 (MQ=255)

                           aaTGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAAAGGACAGCAAACAAGGTTGCTc                                                                                                         <  2:1165979/140‑1 (MQ=255)

                             tGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGa                                                                                                       >  2:549726/1‑140 (MQ=255)

                             tGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGa                                                                                                       <  2:63336/140‑1 (MQ=255)

                              gggCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGaa                                                                                                      >  2:1106084/1‑139 (MQ=255)

                                  gTTCTACTTTCGTTAGGGGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATAtct                                                                                                  >  1:1022417/1‑140 (MQ=255)

                                  gTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGt                                                                                                              >  2:1063157/1‑128 (MQ=255)

                                  gTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGt                                                                                                              <  1:1063157/128‑1 (MQ=255)

                                   ttCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATAtctc                                                                                                 >  1:893564/1‑140 (MQ=255)

                                   ttCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATAtctc                                                                                                 >  2:701489/1‑140 (MQ=255)

                                              ttAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGt                                                                                      >  1:277911/1‑140 (MQ=255)

                                              ttAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGt                                                                                      >  1:418633/1‑140 (MQ=255)

                                              ttAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGt                                                                                      >  1:139917/1‑140 (MQ=255)

                                                aGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGttt                                                                                    <  2:650567/140‑1 (MQ=255)

                                                aGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGttt                                                                                    <  1:1038617/140‑1 (MQ=255)

                                                     tGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCtaca                                                                               >  1:230438/1‑140 (MQ=255)

                                                      gAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCtacat                                                                              <  1:140255/140‑1 (MQ=255)

                                                       aaTCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCtacatt                                                                             >  2:402757/1‑140 (MQ=255)

                                                                aaTCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCg                                                                    <  1:269077/140‑1 (MQ=255)

                                                                 aTCATTTACTTTTATCTTATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGt                                                                   >  2:850146/1‑140 (MQ=255)

                                                                 aTCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGt                                                                   >  2:440692/1‑140 (MQ=255)

                                                                      ttACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTCCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGc                                                              <  2:1022417/140‑1 (MQ=255)

                                                                       tACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCa                                                             >  1:452184/1‑140 (MQ=255)

                                                                           tttATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCg                                                         <  1:335846/140‑1 (MQ=255)

                                                                            ttATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGa                                                        >  1:9522/1‑140 (MQ=255)

                                                                              aTCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGATGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAgg                                                      >  1:647506/1‑140 (MQ=255)

                                                                                    taGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTaa                                                >  2:535967/1‑140 (MQ=255)

                                                                                    taGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTaa                                                >  2:193031/1‑140 (MQ=255)

                                                                                    taGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTaa                                                >  2:210346/1‑140 (MQ=255)

                                                                                       tAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGACGTCTAGCAAGCGAGGGGGTAAGtt                                             >  1:279627/1‑140 (MQ=255)

                                                                                         aaCAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTc                                           >  1:1004373/1‑140 (MQ=255)

                                                                                         aaCAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATATCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTc                                           >  2:814054/1‑140 (MQ=255)

                                                                                          aCAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTcc                                          <  1:485126/140‑1 (MQ=255)

                                                                                            aaTCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCaa                                        >  1:509644/1‑140 (MQ=255)

                                                                                             aTCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCaaa                                       <  1:701489/140‑1 (MQ=255)

                                                                                              tCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTcc                                          <  2:751667/136‑1 (MQ=255)

                                                                                              tCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTcc                                          >  1:751667/1‑136 (MQ=255)

                                                                                              tCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAg                                      >  2:538901/1‑140 (MQ=255)

                                                                                              tCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAg                                      >  1:422350/1‑140 (MQ=255)

                                                                                              tCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAg                                      >  2:278916/1‑140 (MQ=255)

                                                                                              tCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAg                                      >  1:185574/1‑140 (MQ=255)

                                                                                               cATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGt                                     >  2:659725/1‑140 (MQ=255)

                                                                                                aTTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGta                                    >  2:791697/1‑140 (MQ=255)

                                                                                                 ttGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGtat                                   >  1:524127/1‑140 (MQ=255)

                                                                                                   gATAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATAc                                 >  1:40579/1‑140 (MQ=255)

                                                                                                     tAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTg                               <  1:625613/140‑1 (MQ=255)

                                                                                                     tAAGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTg                               <  2:524127/140‑1 (MQ=255)

                                                                                                       aGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGa                             <  1:687761/140‑1 (MQ=255)

                                                                                                       aGTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATATCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGa                             <  1:814054/140‑1 (MQ=255)

                                                                                                        gTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGAc                            >  2:908671/1‑140 (MQ=255)

                                                                                                        gTCGTTGTTATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGAc                            >  2:690079/1‑140 (MQ=255)

                                                                                                           gttgttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGtata                                  >  1:955425/1‑131 (MQ=255)

                                                                                                            ttgttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtg                        >  2:923195/1‑140 (MQ=255)

                                                                                                            ttgttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtg                        <  1:1092569/140‑1 (MQ=255)

                                                                                                            ttgttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtg                        <  1:690079/140‑1 (MQ=255)

                                                                                                            ttgttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtg                        <  1:193031/140‑1 (MQ=255)

                                                                                                            ttgttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtg                        <  2:452184/140‑1 (MQ=255)

                                                                                                            ttgttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtg                        >  2:1062783/1‑140 (MQ=255)

                                                                                                            ttgttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtg                        <  2:230438/140‑1 (MQ=255)

                                                                                                              gttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtgtg                      <  1:647092/140‑1 (MQ=255)

                                                                                                              gttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtgtg                      <  1:659725/140‑1 (MQ=255)

                                                                                                              gttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtgtg                      <  1:405490/140‑1 (MQ=255)

                                                                                                              gttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtgtg                      <  2:40579/140‑1 (MQ=255)

                                                                                                              gttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtgtg                      <  1:370898/140‑1 (MQ=255)

                                                                                                              gttATAACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtgtg                      <  1:278916/140‑1 (MQ=255)

                                                                                                                 ataACCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAgg                   <  1:795518/140‑1 (MQ=255)

                                                                                                                   aaCCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTgg                              <  1:234970/127‑1 (MQ=255)

                                                                                                                   aaCCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGtt                 <  2:16444/140‑1 (MQ=255)

                                                                                                                   aaCCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGtt                 >  2:1086514/1‑140 (MQ=255)

                                                                                                                   aaCCTGCTGCTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGtt                 <  2:131473/140‑1 (MQ=255)

                                                                                                                       tgctgcTATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAaat             >  2:627478/1‑140 (MQ=255)

                                                                                                                        gctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAaata            >  1:932007/1‑140 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGa                             >  2:910045/1‑122 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGa                             <  1:910045/122‑1 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtgtg                      <  2:705885/129‑1 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtgtg                      >  1:705885/1‑129 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtg                        <  1:157994/127‑1 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGAtg                        >  2:157994/1‑127 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAaataa           >  2:647909/1‑140 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAaataa           >  1:13939/1‑140 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAaataa           >  1:123307/1‑140 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAaataa           >  1:1049150/1‑140 (MQ=255)

                                                                                                                         ctgctATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTG‑GGTTAaatgat          >  2:156976/1‑140 (MQ=255)

                                                                                                                             tATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCg       <  2:265479/140‑1 (MQ=255)

                                                                                                                             tATCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCg       <  2:1004373/140‑1 (MQ=255)

                                                                                                                              aTCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGt      >  2:818456/1‑140 (MQ=255)

                                                                                                                               tCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGtt     <  1:850146/140‑1 (MQ=255)

                                                                                                                               tCCGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGtt     <  1:535967/140‑1 (MQ=255)

                                                                                                                                 cGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGt   >  1:986048/1‑140 (MQ=255)

                                                                                                                                 cGAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGt   <  2:893564/140‑1 (MQ=255)

                                                                                                                                  gAACTCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTc  <  1:923195/140‑1 (MQ=255)

CTCAACTAAAATTCAGGAGCACTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTC  >  NC_000913/571843‑572112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`