Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 76,501 C→T G267S (GGC→AGC)  sgrR ← DNA‑binding transcriptional dual regulator SgrR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091376,5010CT100.0% 200.1 / NA 57G267S (GGC→AGC) sgrRDNA‑binding transcriptional dual regulator SgrR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (28/29);  total (28/29)

GGCTCGTCGGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGAC  >  NC_000913/76368‑76637
                                                                                                                                     |                                                                                                                                        
ggctCGTCGGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTgatggg                                                                                                                                    >  2:179876/1‑140 (MQ=255)
  ctCGTCGGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTgatgggat                                                                                                                                  >  2:155538/1‑140 (MQ=255)
    cgtcgGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTgatgggatgg                                                                                                                                <  2:899702/140‑1 (MQ=255)
     gtcgGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGAtggc                                                                                                                               <  1:462847/140‑1 (MQ=255)
          cAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCCGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCa                                                                                                                          <  2:790873/140‑1 (MQ=255)
           aaTTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCaa                                                                                                                         >  2:932446/1‑140 (MQ=255)
               tCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGtt                                                                                                                     >  1:244900/1‑140 (MQ=255)
                   gCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTg                                                                                                                 <  2:792884/140‑1 (MQ=255)
                    cAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGa                                                                                                                <  2:671964/140‑1 (MQ=255)
                       aaCCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAggg                                                                                                             <  1:179876/140‑1 (MQ=255)
                                   aaCTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTcgc                                                                                                 <  2:244900/140‑1 (MQ=255)
                                    aCTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTcgcg                                                                                                <  1:155538/140‑1 (MQ=255)
                                    aCTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTcgcg                                                                                                >  2:52881/1‑140 (MQ=255)
                                      ttCGTCGATTAATGCCCGGTAACCGAAGAAGTAATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTcgcgcg                                                                                              <  2:626158/140‑1 (MQ=255)
                                        cgtcgATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTcg                                                                                                  <  1:397227/134‑1 (MQ=255)
                                        cgtcgATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTcg                                                                                                  >  2:397227/1‑134 (MQ=255)
                                         gtcgATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCa                                                                                           <  1:522448/140‑1 (MQ=255)
                                          tcgATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAg                                                                                          >  2:553171/1‑140 (MQ=255)
                                              ttAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGatc                                                                                      <  2:816587/140‑1 (MQ=255)
                                                   gCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTACTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTcg                                                                                                  >  1:349520/1‑123 (MQ=255)
                                                   gCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTACTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTcg                                                                                                  <  2:349520/123‑1 (MQ=255)
                                                        gTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCg                                                                               >  1:939475/1‑137 (MQ=255)
                                                        gTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCg                                                                               <  2:939475/137‑1 (MQ=255)
                                                        gTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGaa                                                                            >  1:625156/1‑140 (MQ=255)
                                                        gTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGaa                                                                            <  1:932446/140‑1 (MQ=255)
                                                          aaCCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACt                                                                          <  1:197810/140‑1 (MQ=255)
                                                            ccGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTg                                                                        >  1:116663/1‑140 (MQ=255)
                                                              gaagaaGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGcc                                                                      >  1:199433/1‑140 (MQ=255)
                                                              gaagaaGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGcc                                                                      <  2:116663/140‑1 (MQ=255)
                                                                agaagTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGcccc                                                                    <  1:553171/140‑1 (MQ=255)
                                                                agaagTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGcccc                                                                    <  2:349649/140‑1 (MQ=255)
                                                                agaagTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGcccc                                                                    <  2:616747/140‑1 (MQ=255)
                                                                       aTCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTa                                                             >  2:265599/1‑140 (MQ=255)
                                                                       aTCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTa                                                             >  2:639649/1‑140 (MQ=255)
                                                                       aTCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTa                                                             >  2:208679/1‑140 (MQ=255)
                                                                       aTCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGACTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTa                                                             >  2:1161090/1‑140 (MQ=255)
                                                                        tCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTaa                                                            <  1:1142189/140‑1 (MQ=255)
                                                                            aTGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGt                                                        <  1:265599/140‑1 (MQ=255)
                                                                            aTGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGt                                                        <  1:208679/140‑1 (MQ=255)
                                                                               ccTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAAc                                                     >  2:887861/1‑140 (MQ=255)
                                                                                  gAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAg                                                  <  2:440129/140‑1 (MQ=255)
                                                                                     ttttCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCgg                                               <  1:887861/140‑1 (MQ=255)
                                                                                             tGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTg                                       >  1:359065/1‑140 (MQ=255)
                                                                                                ttGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGt                                    <  2:359065/140‑1 (MQ=255)
                                                                                                      cTGTTGCGAATCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATg                              <  2:1165399/140‑1 (MQ=255)
                                                                                                         ttGCGAATCACCGCATACGGATCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGat                           >  2:834028/1‑140 (MQ=255)
                                                                                                              aaTCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCa                      <  1:1038652/140‑1 (MQ=255)
                                                                                                              aaTCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCa                      >  2:695480/1‑140 (MQ=255)
                                                                                                              aaTCACCGCATACGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCa                      >  1:141372/1‑140 (MQ=255)
                                                                                                                         aCGGACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGc           >  1:351459/1‑140 (MQ=255)
                                                                                                                           ggACCGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGt         >  2:1113546/1‑140 (MQ=255)
                                                                                                                           ggACCGGTGCTGATGGGATGGCTGGC‑AAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCa                      >  1:986521/1‑126 (MQ=255)
                                                                                                                           ggACCGGTGCTGATGGGATGGCTGGC‑AAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCa                      <  2:986521/126‑1 (MQ=255)
                                                                                                                              ccGGTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCgg      >  1:961458/1‑140 (MQ=255)
                                                                                                                                 gTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGa   >  1:96768/1‑140 (MQ=255)
                                                                                                                                 gTGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGa   >  1:242445/1‑140 (MQ=255)
                                                                                                                                  tGCTGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGac  >  2:933330/1‑140 (MQ=255)
                                                                                                                                     |                                                                                                                                        
GGCTCGTCGGCAATTTCCGGCAGAACCCAGACGTTAACTTCGTCGATTAATGCCCGGTAACCGAAGAAGTCATCGAATGCCTGAATTTTCAGTTGATTGGTGCTGTTGCGAATCACCGCATACGGACCGGTGCCGATGGGATGGCTGGCAAAGTTACTGAGGGTTTCCCATTCGCGCGGCAGGATCATCGCCGGAACTTGCCCCAGCAGTAACGGTAACCAGCGGTCCGGTTGCGTGAGATGGATATCCAGCGTCCAGGGCGTCGGCGAC  >  NC_000913/76368‑76637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑