Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,564,444	T→C	intergenic (+72/‑79)	yffR → / → yffS	CPZ‑55 prophage; uncharacterized protein YffR/CPZ‑55 prophage; uncharacterized protein YffS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,564,444	0	T	C	100.0%	223.3 / NA	61	intergenic (+72/‑79)	yffR/yffS	CPZ‑55 prophage; uncharacterized protein YffR/CPZ‑55 prophage; uncharacterized protein YffS
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (27/34);  total (27/34)

AACGTAGCAGAAAACAACGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGA  >  NC_000913/2564313‑2564576                                                                                                                                     |                                                                                                                                     aaCGTAGCAGAAAACAACGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCtt                                                                                                                                <  1:879260/138‑1 (MQ=255) aaCGTAGCAGAAAACAACGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCtt                                                                                                                                >  2:879260/1‑138 (MQ=255) aaCGTAGCAGAAAACAACGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTcc                                                                                                                              <  1:936434/140‑1 (MQ=255)   cGTAGCAGAAAACAACGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGt                                                                                                                            <  1:592177/140‑1 (MQ=255)   cGTAGCAGAAAACAACGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGt                                                                                                                            <  2:202062/140‑1 (MQ=255)         aaaaaaCCACCGCTTTTTTTTTGGTA‑GTTGAGTTATTGAAAAACCTTAATGAATTCCAATAGCAACCACCAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCt                                                                                                                      <  2:202312/138‑1 (MQ=255)         aGAAAACAACGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCt                                                                                                                      <  1:817091/140‑1 (MQ=255)         aGAAAACAACGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCt                                                                                                                      <  1:647861/140‑1 (MQ=255)             aacaacGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTAcc                                                                                                                  <  1:406449/140‑1 (MQ=255)              acaacGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTAccc                                                                                                                 >  1:367791/1‑140 (MQ=255)                aacGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTc                                                                                                               <  2:189646/140‑1 (MQ=255)                  cGGC‑TTTGTTTTGGTAGGTAGAGAATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATGTGCGTCAATATTCCCTTCCGTTACGCTTACCCTcca                                                                                                             >  2:461669/1‑140 (MQ=255)                          gTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATAc                                                                                                      <  2:71047/140‑1 (MQ=255)                              tGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCgt                                                                                                  <  1:945247/140‑1 (MQ=255)                                    gtagAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAAc                                                                                            >  2:46641/1‑140 (MQ=255)                                     tagAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCACTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTATGCTTGCCCTCCACCAATACGCGTGTTAAcc                                                                                           >  2:819927/1‑140 (MQ=255)                                       gagTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTc                                                                                         <  2:980178/140‑1 (MQ=255)                                       gagTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTc                                                                                         <  2:35438/140‑1 (MQ=255)                                       gagTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTc                                                                                         <  2:800155/140‑1 (MQ=255)                                        agTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTcc                                                                                        >  2:542671/1‑140 (MQ=255)                                        agTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTcc                                                                                        >  2:625460/1‑140 (MQ=255)                                        agTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTcc                                                                                        >  2:617367/1‑140 (MQ=255)                                        agTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTcc                                                                                        >  1:140870/1‑140 (MQ=255)                                             ttGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATg                                                                                   <  2:553331/140‑1 (MQ=255)                                             ttGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATg                                                                                   >  2:1090883/1‑140 (MQ=255)                                               gAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACCCCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATTCTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGa                                                                                 <  1:461669/140‑1 (MQ=255)                                               gAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGa                                                                                 <  2:367791/140‑1 (MQ=255)                                                  aaaCGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTc                                                                              >  1:929237/1‑140 (MQ=255)                                                  aaaCGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTc                                                                              >  1:512214/1‑140 (MQ=255)                                                    aCGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTa                                                                            >  2:312982/1‑140 (MQ=255)                                                        aaTTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCG‑TACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATgaga                                                                       <  2:881341/140‑1 (MQ=255)                                                           tgattgCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATg                                                                     <  1:153805/140‑1 (MQ=255)                                                           tgattgCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATg                                                                     <  2:20926/140‑1 (MQ=255)                                                            gattgCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATgg                                                                    <  2:546918/140‑1 (MQ=255)                                                             attgCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATggg                                                                   >  1:1016694/1‑140 (MQ=255)                                                                gCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCGATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGgaga                                                                >  2:1096447/1‑140 (MQ=255)                                                                gCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGgaga                                                                <  1:46641/140‑1 (MQ=255)                                                                        caacaaCTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATc                                                        <  1:690929/140‑1 (MQ=255)                                                                                aaaCAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTa                                                <  1:166209/140‑1 (MQ=255)                                                                                 aacaacCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTAc                                               >  1:540738/1‑140 (MQ=255)                                                                                         aTACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCaa                                       >  2:740961/1‑140 (MQ=255)                                                                                              cccGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAAttt                                  >  2:83179/1‑140 (MQ=255)                                                                                                cGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTACCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGaa                                            >  2:1170245/1‑128 (MQ=255)                                                                                                cGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTACCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGaa                                            <  1:1170245/128‑1 (MQ=255)                                                                                                   ccccTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGAc                             >  2:649850/1‑140 (MQ=255)                                                                                                    cccTCGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATTGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACa                            >  2:991849/1‑140 (MQ=255)                                                                                                        cGCCGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCt                        >  2:314113/1‑140 (MQ=255)                                                                                                          ccGGGTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCa                      <  1:83179/140‑1 (MQ=255)                                                                                                            gggTTTTTTGTGATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCaaa                    <  1:314113/140‑1 (MQ=255)                                                                                                                       gATCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGAt         >  1:714847/1‑140 (MQ=255)                                                                                                                        aTCTGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATg        >  2:348168/1‑140 (MQ=255)                                                                                                                           tGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGaa     >  2:209053/1‑140 (MQ=255)                                                                                                                           tGCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGaa     >  2:18738/1‑140 (MQ=255)                                                                                                                            gCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAg    <  2:714847/140‑1 (MQ=255)                                                                                                                            gCGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAg    <  1:312982/140‑1 (MQ=255)                                                                                                                             cGTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAgg   >  2:815930/1‑140 (MQ=255)                                                                                                                              gTCAATTCTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa  <  1:1075077/140‑1 (MQ=255)                                                                                                                              gTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa  <  2:263826/140‑1 (MQ=255)                                                                                                                              gTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa  <  1:625460/140‑1 (MQ=255)                                                                                                                              gTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa  <  1:542671/140‑1 (MQ=255)                                                                                                                              gTCAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGa  <  2:499539/140‑1 (MQ=255)                                                                                                                                cAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGa      <  2:592337/134‑1 (MQ=255)                                                                                                                                cAATACTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGa      >  1:592337/1‑134 (MQ=255)                                                                                                                                     |                                                                                                                                     AACGTAGCAGAAAACAACGGC‑TTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGATTGCGAATAGCAACAACTAAACAACCAATACACCCGGCCCCTCGCCGGGTTTTTTGTGATCTGCGTCAATATTCCCTTCCGTTACGCTTACCCTCCACCAATACGCGTGTTAACCTCCCAATGGATTCTATGAGATGGGAGATAAAAATCATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGA  >  NC_000913/2564313‑2564576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑