Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,480,853	Δ1 bp	coding (309/555 nt)	kefG ←	protein required for KefB activity

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,480,851	0	T	.	100.0%	344.9 / NA	81	coding (311/555 nt)	kefG	protein required for KefB activity
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (39/42);  total (39/42)

ACTTAACCAATGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTACTTTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACAATCACCTCGTGCTC  >  NC_000913/3480715‑3480981                                                                                                                                         |                                                                                                                                   aCTTAACCAATGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTACttcc                                                                                                                                 >  1:756747/1‑138 (MQ=255) aCTTAACCAATGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTACttcc                                                                                                                                 >  2:467383/1‑138 (MQ=255) aCTTAACCAATGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTACttcc                                                                                                                                 >  2:37842/1‑138 (MQ=255)    tAACCAATGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGc                                                                                                                             >  1:171572/1‑140 (MQ=255)           tGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTgg                                                                                                                      >  1:718538/1‑140 (MQ=255)           tGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTgg                                                                                                                      >  2:9365/1‑140 (MQ=255)           tGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTgg                                                                                                                      >  2:497407/1‑140 (MQ=255)           tGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTgg                                                                                                                      >  2:2924/1‑140 (MQ=255)           tGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTgg                                                                                                                      >  1:197067/1‑140 (MQ=255)           tGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTgg                                                                                                                      >  1:479950/1‑140 (MQ=255)           tGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTgg                                                                                                                      >  2:1192753/1‑140 (MQ=255)            gCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGt                                                                                                                     >  1:1229851/1‑140 (MQ=255)            gCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGt                                                                                                                     <  2:197067/140‑1 (MQ=255)               tCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTtc                                                                                                                  >  1:836373/1‑140 (MQ=255)                ccGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTtcc                                                                                                                 >  1:648523/1‑140 (MQ=255)                  ggCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTtcctc                                                                                                               >  1:1079823/1‑140 (MQ=255)                     acaTGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCg                                                                                                            >  1:934932/1‑140 (MQ=255)                        tGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGcc                                                                                                         >  1:764235/1‑140 (MQ=255)                         gCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGtt                                                                                                                    <  2:1050462/128‑1 (MQ=255)                         gCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGtt                                                                                                                    >  1:1050462/1‑128 (MQ=255)                               cgccAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGc                                                                                                  <  2:179770/140‑1 (MQ=255)                                    gTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAAc                                                                                             <  2:171572/140‑1 (MQ=255)                                      tCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCa                                                                                           <  1:404390/140‑1 (MQ=255)                                      tCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCa                                                                                           <  1:671404/140‑1 (MQ=255)                                      tCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCa                                                                                           <  1:84443/140‑1 (MQ=255)                                      tCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCa                                                                                           <  2:958428/140‑1 (MQ=255)                                       cAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCAc                                                                                          <  1:211057/140‑1 (MQ=255)                                       cAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCAc                                                                                          <  1:1314970/140‑1 (MQ=255)                                        aaaGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACg                                                                                         <  1:2924/140‑1 (MQ=255)                                        aaaGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACg                                                                                         <  1:614337/140‑1 (MQ=255)                                            gggCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCaa                                                                                                <  2:654082/129‑1 (MQ=255)                                            gggCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCaa                                                                                                >  1:654082/1‑129 (MQ=255)                                               cgcAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAAt                                                                                  >  1:978827/1‑140 (MQ=255)                                               cgcAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAAt                                                                                  >  1:881946/1‑140 (MQ=255)                                               cgcAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAAt                                                                                  >  2:1221772/1‑140 (MQ=255)                                                     acaTCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCgg                                                                            <  2:1356178/140‑1 (MQ=255)                                                         cGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGTACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCa                                                                        >  2:514125/1‑140 (MQ=255)                                                         cGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCa                                                                        >  2:906212/1‑140 (MQ=255)                                                            tCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCCCTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGcc                                                                     <  2:622717/140‑1 (MQ=255)                                                            tCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATCCCCGGTCCAGcc                                                                     <  2:978827/140‑1 (MQ=255)                                                            tCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGcc                                                                     <  1:906212/140‑1 (MQ=255)                                                            tCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGcc                                                                     <  2:1206568/140‑1 (MQ=255)                                                            tCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGcc                                                                     >  1:368088/1‑140 (MQ=255)                                                              aTCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCAc                                                                   >  1:1248376/1‑140 (MQ=255)                                                                 gggTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCActct                                                                <  2:1229851/140‑1 (MQ=255)                                                                   gTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTc                                                                          >  2:651491/1‑128 (MQ=255)                                                                   gTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTc                                                                          <  1:651491/128‑1 (MQ=255)                                                                   gTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCActct                                                                >  1:606573/1‑138 (MQ=255)                                                                   gTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCActct                                                                <  2:606573/138‑1 (MQ=255)                                                                   gTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCttt                                                              >  2:698055/1‑140 (MQ=255)                                                                      gCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAg                                                           <  1:497407/140‑1 (MQ=255)                                                                           tCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAgcg                                                      <  1:943907/140‑1 (MQ=255)                                                                              gcgcGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCg                                                   <  1:9365/140‑1 (MQ=255)                                                                                gcgTCATAACGGTAAGCCCTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCggg                                                 <  1:1186128/140‑1 (MQ=255)                                                                                gcgTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCggg                                                 <  2:1079823/140‑1 (MQ=255)                                                                                gcgTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCggg                                                 <  2:832670/140‑1 (MQ=255)                                                                                gcgTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCggg                                                 <  2:675068/140‑1 (MQ=255)                                                                                gcgTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCggg                                                 <  2:648523/140‑1 (MQ=255)                                                                                   tCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAg                                              <  1:145435/140‑1 (MQ=255)                                                                                      tAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCta                                           <  2:1074195/140‑1 (MQ=255)                                                                                      tAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCta                                           <  2:881946/140‑1 (MQ=255)                                                                                      tAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCta                                           <  1:900714/140‑1 (MQ=255)                                                                                      tAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCta                                           <  2:368088/140‑1 (MQ=255)                                                                                       aaCGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTCCCCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCtat                                          <  2:788803/140‑1 (MQ=255)                                                                                       aaCGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCtat                                          <  1:37842/140‑1 (MQ=255)                                                                                       aaCGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCtat                                          <  1:467383/140‑1 (MQ=255)                                                                                       aaCGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCtat                                          <  2:918873/140‑1 (MQ=255)                                                                                       aaCGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCtat                                          <  2:99853/140‑1 (MQ=255)                                                                                              aGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGtata                                   >  1:972627/1‑140 (MQ=255)                                                                                              aGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGtata                                   >  1:1322840/1‑140 (MQ=255)                                                                                              aGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGtata                                   >  1:114246/1‑140 (MQ=255)                                                                                              aGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGtata                                   >  1:1303250/1‑140 (MQ=255)                                                                                              aGCACTTACCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGtata                                   >  1:292742/1‑140 (MQ=255)                                                                                               gCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATaa                                  >  2:240767/1‑140 (MQ=255)                                                                                                cACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATaaa                                 >  1:307651/1‑140 (MQ=255)                                                                                                   tttCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAagag                              <  1:514125/140‑1 (MQ=255)                                                                                                    ttCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAgg                             >  1:59546/1‑140 (MQ=255)                                                                                                    ttCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAgg                             <  1:982586/140‑1 (MQ=255)                                                                                                    ttCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAgg                             >  1:1169373/1‑140 (MQ=255)                                                                                                     tCCGGTGCGCCGGTGGTAATCACGTTCCGCCAGTAC‑TCCCCGCCAGTTGGTTTCCTCCCGGCCCGCGGGAAAAACCCCGACTTAATCCCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGa                            <  2:1242280/140‑1 (MQ=255)                                                                                                     tCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGa                            <  2:1303250/140‑1 (MQ=255)                                                                                                       cGGCTCGCCGGTGGTAATCACGCTACCCCGGTAC‑TTCCCGCCAGTGGTTTTCCTCCCGCCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATg                          <  2:292742/140‑1 (MQ=255)                                                                                                           tCGCCGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGa                      <  1:240767/140‑1 (MQ=255)                                                                                                             cccGGTGGAAATCCCCCTCCGCC‑GTTCCTTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGAAAAACCACCACTTAATTCCCTGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGaaa                    <  2:479950/139‑1 (MQ=255)                                                                                                               cGGTGGTAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGa                  <  2:114246/140‑1 (MQ=255)                                                                                                                  tggtAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACaa               <  2:1102484/140‑1 (MQ=255)                                                                                                                  tggtAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACaa               <  1:1221772/140‑1 (MQ=255)                                                                                                                   ggtAATCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACAAt              <  2:1169373/140‑1 (MQ=255)                                                                                                                      aaTCACGCTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACAATCAc           >  2:1160252/1‑140 (MQ=255)                                                                                                                             cTACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACAATCACCTCGTGc    <  2:718538/140‑1 (MQ=255)                                                                                                                              tACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACAATCACCTCGTGCt   >  2:121992/1‑140 (MQ=255)                                                                                                                              tACGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACAATCACCTCGTGCt   >  1:626834/1‑140 (MQ=255)                                                                                                                               ccGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACAATCACCTCGTGCTc  <  2:756747/139‑1 (MQ=255)                                                                                                                               aCGCCAGTAC‑TTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACAATCACCTCGTGCTc  >  1:761174/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                   ACTTAACCAATGCATCCGGCACATGCCCGCCGCCAGTTCAAAGGGGCGCAGCACATCGCTCATCGGGTAGCGATTCAGCGCGTCATAACGGTAAGCACTTTCCGGCTCGCCGGTGGTAATCACGCTACGCCAGTACTTTCCCGCCAGTTGGTTTCCTCCCGGCCCGCTGGCAAAACCACGACTTAATACCCGGTCCAGCCACTCTTTCAGTAGCGCCGGGCAGCTATAGGTATAAAGAGGATGCTGAAAGACAATCACCTCGTGCTC  >  NC_000913/3480715‑3480981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑