Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,619,304	(A)5→4	coding (185/435 nt)	marR →	DNA‑binding transcriptional repressor MarR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,619,300	0	A	.	100.0%	294.7 / NA	69	coding (181/435 nt)	marR	DNA‑binding transcriptional repressor MarR
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (33/36);  total (33/36)

GGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCG  >  NC_000913/1619161‑1619432                                                                                                                                            |                                                                                                                                     gggTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTGCCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGa                                                                                                                                      >  1:725063/1‑140 (MQ=255) gggTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGa                                                                                                                                      <  1:838980/140‑1 (MQ=255) gggTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGa                                                                                                                                      <  2:270589/140‑1 (MQ=255)     cGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGaaaag                                                                                                                                  <  2:94395/140‑2 (MQ=255)       cTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGaaaaggt                                                                                                                                >  2:880989/1‑137 (MQ=255)            tCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgt                                                                                                                          >  2:1322776/1‑140 (MQ=255)               atatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcgg                                                                                                                       <  2:855927/140‑1 (MQ=255)               atatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGCATTACTCCGGTTGAACTG‑AAAAGGTATTgtcgg                                                                                                                       <  1:1128065/140‑1 (MQ=255)                tatGGTTAATCAGGAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcggt                                                                                                                      <  1:192796/140‑1 (MQ=255)                tatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcggt                                                                                                                      >  2:99183/1‑140 (MQ=255)                tatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcggt                                                                                                                      <  1:782107/140‑1 (MQ=255)                tatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcggt                                                                                                                      <  1:846795/140‑1 (MQ=255)                tatGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcggt                                                                                                                      <  1:182259/140‑1 (MQ=255)                 atGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTgtcggtc                                                                                                                     >  2:770312/1‑140 (MQ=255)                    gTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGAc                                                                                                                  <  1:99183/140‑1 (MQ=255)                    gTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGAc                                                                                                                  >  1:829337/1‑140 (MQ=255)                     ttAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGAcc                                                                                                                 >  1:344460/1‑140 (MQ=255)                     ttAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGAcc                                                                                                                 <  1:379498/140‑1 (MQ=255)                      tAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCt                                                                                                                >  1:371630/1‑140 (MQ=255)                      tAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCt                                                                                                                >  2:1049064/1‑140 (MQ=255)                       aaTCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTg                                                                                                               >  2:410788/1‑140 (MQ=255)                        aTCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTgg                                                                                                              <  2:866368/140‑1 (MQ=255)                        aTCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTgg                                                                                                              <  1:1212638/140‑1 (MQ=255)                             aagaaagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTGCCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCa                                                                                                         <  2:725063/140‑1 (MQ=255)                             aagaaagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCa                                                                                                         >  2:609887/1‑140 (MQ=255)                              agaaagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCAc                                                                                                        >  1:428474/1‑140 (MQ=255)                               gaaagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACt                                                                                                       <  2:371630/140‑1 (MQ=255)                                 aagaTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGa                                                                                                     <  2:899940/140‑1 (MQ=255)                                    aTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGAccc                                                                                                  <  1:1049064/140‑1 (MQ=255)                                    aTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGAccc                                                                                                  <  1:410788/140‑1 (MQ=255)                                    aTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGAccc                                                                                                  <  1:1249148/140‑1 (MQ=255)                                    aTCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGAccc                                                                                                  <  1:369617/140‑1 (MQ=255)                                           gCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCt                                                                                           >  2:196679/1‑140 (MQ=255)                                             ttAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTgg                                                                                         <  1:192635/140‑1 (MQ=255)                                                  gAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGc                                                                                    <  2:337773/140‑1 (MQ=255)                                                      aTCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                                >  1:1118422/1‑140 (MQ=255)                                                      aTCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                                <  2:335309/140‑1 (MQ=255)                                                      aTCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                                <  1:770312/140‑1 (MQ=255)                                                      aTCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                                <  1:14137/140‑1 (MQ=255)                                                      aTCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                                <  1:1322776/140‑1 (MQ=255)                                                      aTCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTgg                                                                                >  1:401251/1‑140 (MQ=255)                                                           tctcCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGt                                                                           <  2:636588/140‑1 (MQ=255)                                                           tctcCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGt                                                                           >  1:474465/1‑140 (MQ=255)                                                              ccGCTGGATATTACCGCGGCACAGTTTAAGGAGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTAGTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTaaa                                                                        >  2:1218392/1‑140 (MQ=255)                                                                  tGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCt                                                                    >  2:1274519/1‑140 (MQ=255)                                                                  tGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCt                                                                    <  1:880989/140‑1 (MQ=255)                                                                   ggATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTg                                                                   <  2:547783/140‑1 (MQ=255)                                                                   ggATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTg                                                                   <  1:609887/140‑1 (MQ=255)                                                                              cgGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGt                                                        >  2:932649/1‑140 (MQ=255)                                                                              cgGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGt                                                        >  2:570613/1‑140 (MQ=255)                                                                               ggCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGtt                                                       >  1:395341/1‑140 (MQ=255)                                                                                       ttAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAAcc                                               <  1:1274519/140‑1 (MQ=255)                                                                                         aaGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCg                                             <  2:474465/140‑1 (MQ=255)                                                                                               ctctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGAc                                       >  1:1013453/1‑140 (MQ=255)                                                                                                tctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACa                                      >  2:245302/1‑140 (MQ=255)                                                                                                tctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACa                                      >  1:782285/1‑140 (MQ=255)                                                                                                tctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACa                                      >  1:139224/1‑140 (MQ=255)                                                                                                 ctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACaa                                     <  1:1199098/140‑1 (MQ=255)                                                                                                    ctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACaatcc                                  <  2:926969/140‑4 (MQ=255)                                                                                                         tCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGGCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGATGCCGAACCCGAATGACAAGCgcggcg                             >  2:1037798/1‑140 (MQ=255)                                                                                                          ccGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGt                            <  2:428474/140‑1 (MQ=255)                                                                                                          ccGCTGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGt                            <  1:85107/140‑1 (MQ=255)                                                                                                              tGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTg                        >  2:278918/1‑140 (MQ=255)                                                                                                              tGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTg                        >  2:524087/1‑140 (MQ=255)                                                                                                              tGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTg                        >  2:203505/1‑140 (MQ=255)                                                                                                              tGCGCGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTg                        >  1:96697/1‑140 (MQ=255)                                                                                                               gcgcGGCGTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTgg                       >  2:191743/1‑140 (MQ=255)                                                                                                                 gtggcgTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTa                     <  1:1218392/138‑1 (MQ=255)                                                                                                                 gcggcgTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTTGTa                     <  1:932649/140‑1 (MQ=255)                                                                                                                   ggcgTGTATTACTCCGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTaaa                   >  1:752320/1‑140 (MQ=255)                                                                                                                                 cGGTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACcggcg     >  1:267848/1‑140 (MQ=255)                                                                                                                                   gTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCggcggc   >  1:1322551/1‑140 (MQ=255)                                                                                                                                   gTTGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCggcggc   <  2:821683/140‑1 (MQ=255)                                                                                                                                    ttGAACTG‑AAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGgcggcg  >  1:780341/1‑140 (MQ=255)                                                                                                                                            |                                                                                                                                     GGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCG  >  NC_000913/1619161‑1619432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑