BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,994,202	(A)_7→8	pseudogene (264/503 nt)	pbl →	transglycosylase domain‑containing protein Pbl

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,994,195	1	.	A	100.0%	379.3 / NA	104	pseudogene (257/503 nt)	pbl	transglycosylase domain‑containing protein Pbl
Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (59/45); total (59/45)

Only 100 of 107 total aligned reads displayed.

TTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATA  >  NC_000913/2994061‑2994329

     ttaaAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑aaaaaaaacg                                                                                                                              <  1:270335/140‑4 (MQ=255)

     ttaaAGCTATCGCTCTTGTTGAAAACAATCTAAAAAAGGATAGCATAGGCAAGAATAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑aaaaaaaacg                                                                                                                              <  1:800632/140‑4 (MQ=255)

        aaGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTgg                                                                                                                            >  1:598174/1‑140 (MQ=255)

         aGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGa                                                                                                                           <  2:598174/140‑1 (MQ=255)

         aGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGa                                                                                                                           >  2:1363946/1‑140 (MQ=255)

          gCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGaa                                                                                                                          <  2:447673/140‑1 (MQ=255)

              tCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGaataat                                                                                                                      >  1:1218043/1‑140 (MQ=255)

                   ctTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAg                                                                                                                 >  1:1013201/1‑140 (MQ=255)

                      gttgAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATg                                                                                                              >  2:601662/1‑140 (MQ=255)

                      gttgAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATg                                                                                                              >  1:851739/1‑140 (MQ=255)

                            aGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACgag                                                                                                        <  2:1218043/140‑1 (MQ=255)

                            aGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACgag                                                                                                        >  2:349972/1‑140 (MQ=255)

                              cAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGAt                                                                                                      >  2:681591/1‑140 (MQ=255)

                                aTCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGAttt                                                                                                    >  2:1144829/1‑140 (MQ=255)

                                aTCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGAttt                                                                                                    >  2:584819/1‑140 (MQ=255)

                                 tCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTg                                                                                                   <  1:1319922/140‑1 (MQ=255)

                                 tCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTg                                                                                                   <  2:221935/140‑1 (MQ=255)

                                 tCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTg                                                                                                   <  2:353942/140‑1 (MQ=255)

                                      aaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGa                                                                                              <  1:1302285/140‑1 (MQ=255)

                                      aaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGa                                                                                              <  1:1144829/140‑1 (MQ=255)

                                      aaaaGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGa                                                                                              <  1:584819/140‑1 (MQ=255)

                                           gATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTg                                                                                                   >  2:1139299/1‑130 (MQ=255)

                                           gATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTg                                                                                                   <  1:1139299/130‑1 (MQ=255)

                                           gATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGa                                                                                              <  1:937280/135‑1 (MQ=255)

                                           gATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGa                                                                                              >  2:937280/1‑135 (MQ=255)

                                           gATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAAcc                                                                                         <  2:726567/140‑1 (MQ=255)

                                             tAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCt                                                                                       >  1:836001/1‑140 (MQ=255)

                                             tAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCt                                                                                       >  1:763365/1‑140 (MQ=255)

                                                    ggCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGa                                                                                >  1:873204/1‑140 (MQ=255)

                                                       aaGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACa                                                                             <  1:1107169/140‑1 (MQ=255)

                                                          aaCAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTa                                                                          >  2:791488/1‑140 (MQ=255)

                                                               agaTAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATa                                                                     >  2:1328106/1‑140 (MQ=255)

                                                               agaTAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACAAGATTTGTTAGATAACCCTTGTCTg                                                                                 >  1:457418/1‑128 (MQ=255)

                                                               agaTAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACAAGATTTGTTAGATAACCCTTGTCTg                                                                                 <  2:457418/128‑1 (MQ=255)

                                                                      aaTAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCg                                                              <  1:548336/140‑1 (MQ=255)

                                                                      aaTAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCg                                                              <  1:559540/140‑1 (MQ=255)

                                                                           cAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGAtt                                                         >  1:1313359/1‑140 (MQ=255)

                                                                              tataAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTta                                                      >  2:1132456/1‑140 (MQ=255)

                                                                                taAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGGACCCAGATTTtata                                                    >  2:860541/1‑140 (MQ=255)

                                                                                taAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAAcc                                                               <  1:1006623/129‑1 (MQ=255)

                                                                                taAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAAcc                                                               >  2:1006623/1‑129 (MQ=255)

                                                                                   agagTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATaa                                                 >  1:698807/1‑140 (MQ=255)

                                                                                     agTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAAcc                                               >  1:816934/1‑140 (MQ=255)

                                                                                     agTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAAcc                                               <  2:763365/140‑1 (MQ=255)

                                                                                      gTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCa                                              >  1:796592/1‑140 (MQ=255)

                                                                                      gTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCa                                              >  2:1006714/1‑140 (MQ=255)

                                                                                        ttAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAtt                                            >  2:330635/1‑140 (MQ=255)

                                                                                        ttAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAtt                                            >  2:399916/1‑140 (MQ=255)

                                                                                         tAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAttt                                           >  1:325864/1‑140 (MQ=255)

                                                                                         tAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAttt                                           >  1:1365274/1‑140 (MQ=255)

                                                                                         tAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCAttt                                           >  1:148009/1‑140 (MQ=255)

                                                                                            attattGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTc                                        >  2:687070/1‑140 (MQ=255)

                                                                                               attGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACg                                     <  2:796592/140‑1 (MQ=255)

                                                                                               attGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACg                                     >  1:758387/1‑140 (MQ=255)

                                                                                                ttGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGt                                    >  1:167074/1‑140 (MQ=255)

                                                                                                 tGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCa                                       >  2:1395840/1‑136 (MQ=255)

                                                                                                 tGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCa                                       <  1:1395840/136‑1 (MQ=255)

                                                                                                  ggTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTtg                                  <  2:167074/140‑1 (MQ=255)

                                                                                                     tAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTgg                               <  1:399916/140‑1 (MQ=255)

                                                                                                      aaTGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGa                              >  1:374197/1‑140 (MQ=255)

                                                                                                       aTGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAg                             <  2:873204/140‑1 (MQ=255)

                                                                                                        tGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGt                            >  1:74686/1‑140 (MQ=255)

                                                                                                          cAGATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTaa                          <  1:1006714/140‑1 (MQ=255)

                                                                                                            gATAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACg                        <  2:698807/140‑1 (MQ=255)

                                                                                                             aTAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACg                                     <  2:628179/126‑1 (MQ=255)

                                                                                                             aTAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACg                                     >  1:628179/1‑126 (MQ=255)

                                                                                                             aTAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGt                       >  1:1016187/1‑140 (MQ=255)

                                                                                                             aTAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGt                       >  2:159509/1‑140 (MQ=255)

                                                                                                             aTAAACCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGt                       >  2:179542/1‑140 (MQ=255)

                                                                                                                aaCCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGc                    <  1:601662/140‑1 (MQ=255)

                                                                                                                aaCCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGc                    <  2:1365274/140‑1 (MQ=255)

                                                                                                                 aCCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCa                   >  2:451793/1‑140 (MQ=255)

                                                                                                                 aCCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCa                   <  2:816934/140‑1 (MQ=255)

                                                                                                                 aCCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCa                   >  1:538197/1‑140 (MQ=255)

                                                                                                                 aCCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCa                   <  1:978461/140‑1 (MQ=255)

                                                                                                                 aCCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCa                   <  2:148009/140‑1 (MQ=255)

                                                                                                                 aCCAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCa                   <  1:217088/140‑1 (MQ=255)

                                                                                                                  ccAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGc                    <  1:620260/138‑1 (MQ=255)

                                                                                                                  ccAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCaa                  >  1:805/1‑140 (MQ=255)

                                                                                                                  ccAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCaa                  <  2:1313359/140‑1 (MQ=255)

                                                                                                                  ccAGATGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCaa                  <  1:349972/140‑1 (MQ=255)

                                                                                                                      aTGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGcc              >  2:902424/1‑140 (MQ=255)

                                                                                                                      aTGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGcc              >  1:834897/1‑140 (MQ=255)

                                                                                                                       tGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTgg                     >  1:286870/1‑132 (MQ=255)

                                                                                                                       tGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTgg                     <  2:286870/132‑1 (MQ=255)

                                                                                                                       tGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCaa                  >  1:1072411/1‑135 (MQ=255)

                                                                                                                       tGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCaa                  <  2:1072411/135‑1 (MQ=255)

                                                                                                                       tGCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCt             >  1:373651/1‑140 (MQ=255)

                                                                                                                        gCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTg            <  1:160588/140‑1 (MQ=255)

                                                                                                                        gCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTg            <  2:834897/140‑1 (MQ=255)

                                                                                                                        gCATATTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTg            <  1:687070/140‑1 (MQ=255)

                                                                                                                          atatTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTggg          <  1:902424/140‑1 (MQ=255)

                                                                                                                          atatTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTggg          <  1:179542/140‑1 (MQ=255)

                                                                                                                           tatTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTgggg         >  1:223805/1‑140 (MQ=255)

                                                                                                                            atTCCCCTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTAGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGa        >  2:1248833/1‑140 (MQ=255)

                                                                                                                                cccTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTg            <  1:324227/132‑1 (MQ=255)

                                                                                                                                cccTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTg            <  1:1204616/132‑1 (MQ=255)

                                                                                                                                cccTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTg            >  2:324227/1‑132 (MQ=255)

                                                                                                                                cccTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTg            >  2:1204616/1‑132 (MQ=255)

                                                                                                                                  cTGTTAAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTtata  >  1:1230889/1‑140 (MQ=255)

TTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTT‑AAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATA  >  NC_000913/2994061‑2994329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`