| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 564,410 | (T)7→8 | coding (71/633 nt) | fimZ ← | putative LuxR family transcriptional regulator FimZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 564,403 | 1 | . | T | 95.8% | 410.1 / 7.5 | 118 | coding (78/633 nt) | fimZ | putative LuxR family transcriptional regulator FimZ |
| Reads supporting (aligned to +/- strand): ref base . (3/2); new base T (50/63); total (53/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.25e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
GTTTGATCCTTTTCAGGAAGGTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTG‑TTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTCCGTTAGGTCGGGAAATTGTACTTTG > NC_000913/564264‑564537 | gtttgATCCTTTTCAGGAAGGTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTg > 2:43709/1‑140 (MQ=255)gtttgATCCTTTTCAGGAAGGTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTg > 1:1130998/1‑140 (MQ=255) tgATCCTTTTCAGGAAGGTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTG‑ttt > 2:48833/1‑140 (MQ=255) tCCTTTTCAGGAAGGTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTG‑tttttt > 1:1126303/1‑140 (MQ=255) ggAAGGTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAg < 1:100968/140‑1 (MQ=255) gAAGGTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGa > 1:507137/1‑140 (MQ=255) aaGGTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCACCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGaa < 2:451177/140‑1 (MQ=255) ggTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGGTAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACt > 2:1346118/1‑140 (MQ=255) ggTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTG‑ttttttt > 1:933556/1‑128 (MQ=255) ggTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGATCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACt > 1:463432/1‑140 (MQ=255) tAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTc > 1:605004/1‑140 (MQ=255) tAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTc < 2:908980/140‑1 (MQ=255) aCCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATa < 1:510132/140‑1 (MQ=255) ccGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAg < 2:491091/140‑1 (MQ=255) ccGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAg > 1:941655/1‑140 (MQ=255) cGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGa < 1:3096/140‑1 (MQ=255) cGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGa < 1:3097/140‑1 (MQ=255) gTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGAc < 2:149405/140‑1 (MQ=255) tCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAg > 2:530932/1‑137 (MQ=255) cTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGAc > 2:481784/1‑138 (MQ=255) cTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGAc < 1:481784/138‑1 (MQ=255) cTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACAt > 1:728129/1‑140 (MQ=255) cTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACAt > 1:209313/1‑140 (MQ=255) tGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACAtt < 2:605004/140‑1 (MQ=255) gTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTc < 1:672912/140‑1 (MQ=255) cGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCtgat < 2:591595/140‑1 (MQ=255) ggCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCtgatga < 2:1030324/140‑1 (MQ=255) ggCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCtgatga > 1:1255294/1‑140 (MQ=255) ggCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCtgatga > 1:1096043/1‑140 (MQ=255) ggCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCtgatga < 1:865745/140‑1 (MQ=255) gCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTgatgat < 1:599597/140‑1 (MQ=255) cAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATa < 1:467955/140‑1 (MQ=255) aGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAgg < 2:1327113/140‑1 (MQ=255) gTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGa > 1:285452/1‑140 (MQ=255) gTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGa > 1:285890/1‑140 (MQ=255) cTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATg < 1:770203/140‑1 (MQ=255) tatCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGt < 1:544060/140‑1 (MQ=255) tatCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGt < 1:928043/140‑1 (MQ=255) tCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTAt < 2:801100/140‑1 (MQ=255) tCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTAt < 2:463432/140‑1 (MQ=255) aTAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCtgatga > 2:34997/1‑125 (MQ=255) aTAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCa > 1:1238044/1‑140 (MQ=255) aTAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTG‑TTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCAt > 2:467002/1‑140 (MQ=255) tAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCa > 1:657267/1‑139 (MQ=255) tAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCa < 2:657267/139‑1 (MQ=255) tAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCAt > 2:384878/1‑140 (MQ=255) tAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCAt > 1:373462/1‑140 (MQ=255) aaTGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGt < 1:1003983/133‑1 (MQ=255) aaTGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGt > 2:1003983/1‑133 (MQ=255) aaTGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATa < 2:941655/140‑1 (MQ=255) aaTGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATa > 1:1396322/1‑140 (MQ=255) aTTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGa > 1:777714/1‑140 (MQ=255) ttAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATg > 2:281770/1‑125 (MQ=255) aaTCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCAc < 2:728129/140‑1 (MQ=255) tCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCg < 2:285452/140‑1 (MQ=255) aaCAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGAc < 2:193657/140‑1 (MQ=255) aCAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTG‑TTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGt > 1:77265/1‑140 (MQ=255) gACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTgg > 1:98087/1‑140 (MQ=255) aCGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGt < 2:560916/140‑1 (MQ=255) cGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGtt < 1:426975/140‑1 (MQ=255) cGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGtt < 1:1063446/140‑1 (MQ=255) cGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGtt < 1:367107/140‑1 (MQ=255) gggTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGttt < 2:1396322/140‑1 (MQ=255) gTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACATAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCa < 2:1247605/140‑1 (MQ=255) gTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCa > 2:1019900/1‑140 (MQ=255) ttCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCAt < 1:938273/140‑1 (MQ=255) gagaTAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGtt > 1:486512/1‑140 (MQ=255) gaTAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTAc < 2:507137/140‑1 (MQ=255) gaTAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTAc < 2:98087/140‑1 (MQ=255) gaTAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTAc < 2:52798/140‑1 (MQ=255) gaTAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTAc < 2:927788/140‑1 (MQ=255) gaTAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTAc < 2:1126303/140‑1 (MQ=255) gaTAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTG‑TTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTAcc < 2:77265/140‑1 (MQ=255) gaTAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTG‑TTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTAcc < 1:467002/140‑1 (MQ=255) aTAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTAcc < 1:795129/140‑1 (MQ=255) aTAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTAcc < 2:1096863/140‑1 (MQ=255) aaTCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGtt < 1:630106/135‑1 (MQ=255) aaTCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGtt > 2:630106/1‑135 (MQ=255) aaTCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAg < 2:782886/140‑1 (MQ=255) aaTCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAg < 2:988441/140‑1 (MQ=255) aaTCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAg < 2:373462/140‑1 (MQ=255) aaTCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAg > 1:1020319/1‑140 (MQ=255) tATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGa < 1:508130/140‑1 (MQ=255) tGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGc > 1:16869/1‑140 (MQ=255) tAATCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACa > 1:1150673/1‑140 (MQ=255) aaTCATCCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACaa > 1:661462/1‑140 (MQ=255) atcatcCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAAt > 2:1149916/1‑140 (MQ=255) atcatcCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAAt > 1:515994/1‑140 (MQ=255) atcatcCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAAt < 2:777714/140‑1 (MQ=255) atcCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAAtttt > 2:957435/1‑140 (MQ=255) atcCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAAtttt > 2:886537/1‑140 (MQ=255) tcCGTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTc > 1:144260/1‑140 (MQ=255) gTTTTCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTCCGt < 2:515994/140‑1 (MQ=255) ttttCAGGACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTCCGtt < 1:993347/140‑1 (MQ=255) ggACAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTCCGTTAGGTCg < 2:369361/140‑1 (MQ=255) aCAATCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTCCGTTAGGTCggg < 1:127895/140‑1 (MQ=255) aaTCTTCAATTCACTGTTTTTTTTGCGACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGATGATGGTTTCATAGTTACCAGTATCATAGGAGCGGGCAATTTTCCGTTAGCTCGGGaa > 2:1313320/1‑140 (MQ=255) tCTGCAATTCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTCCGTTAGGTCGGGAAAt > 1:1021125/1‑140 (MQ=255) ttCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTCCGTTAGGTCGGGAAATTGTACtt < 1:886537/140‑1 (MQ=255) ttCACTGTTTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTCCGTTAGGTCGGGAAATTGTACtt < 1:957435/140‑1 (MQ=255) | GTTTGATCCTTTTCAGGAAGGTAAAACCGTCTGTTCCGGGCAAGTCTATATCCATAATGATTAAATCAACAGGACGGGTTCGGAGATAATCGATGGTTATGCGATAATCATCCGTTTTCAGGACAATCTGCAATTCACTG‑TTTTTTTGCAACAGAACTTCAATAGACATTCTGATGATAGGATGAGTATCCATAATGATCACCGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTCCGTTAGGTCGGGAAATTGTACTTTG > NC_000913/564264‑564537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |