Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,472,006	+C	pseudogene (57/519 nt)	yfdL ←	CPS‑53 (KpLE1) prophage; putative uncharacterized protein YfdL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,472,002	1	.	C	100.0%	211.1 / NA	60	pseudogene (61/519 nt)	yfdL	CPS‑53 (KpLE1) prophage; putative uncharacterized protein YfdL
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (22/38);  total (22/38)

CCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCG‑CCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTGGGGGTTACCACGGGTACGGGGGA  >  NC_000913/2471863‑2472130                                                                                                                                             |                                                                                                                                 ccTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATgccg                                                                                                                                   <  2:155282/140‑1 (MQ=255)    aCATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCG‑ccc                                                                                                                               <  2:695200/140‑1 (MQ=255)    aCATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCG‑ccc                                                                                                                               >  1:693126/1‑140 (MQ=255)     cATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCG‑cccc                                                                                                                              <  2:49669/140‑1 (MQ=255)      aTTTCTTTTAGCCGCTTCTCCCAAACCAATGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCG‑ccccc                                                                                                                             <  2:933190/140‑2 (MQ=255)      aTTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCG‑ccccc                                                                                                                             <  2:591097/140‑2 (MQ=255)         tCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCG‑cccccttc                                                                                                                          >  1:726786/1‑136 (MQ=255)          cTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCG‑cccccttct                                                                                                                         >  2:25332/1‑135 (MQ=255)           ttttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTtctc                                                                                                                         >  1:1282671/1‑140 (MQ=255)           ttttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTtctc                                                                                                                         <  2:631969/140‑1 (MQ=255)           ttttAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTtctc                                                                                                                         <  1:373410/140‑1 (MQ=255)               aGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAgg                                                                                                                     <  2:693126/140‑1 (MQ=255)               aGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAgg                                                                                                                     <  1:639512/140‑1 (MQ=255)                     ttCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCa                                                                                                               >  2:825406/1‑140 (MQ=255)                      tctcCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCAc                                                                                                              <  1:203664/140‑1 (MQ=255)                          ccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGa                                                                                                          <  1:420981/140‑1 (MQ=255)                          ccAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGa                                                                                                          <  1:526447/140‑1 (MQ=255)                           cAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAg                                                                                                         >  2:1185927/1‑140 (MQ=255)                           cAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAg                                                                                                         <  1:23866/140‑1 (MQ=255)                                 aaGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTcc                                                                                                   >  1:1243322/1‑140 (MQ=255)                                  aGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCca                                                                                                  >  1:727198/1‑140 (MQ=255)                                  aGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCca                                                                                                  <  1:1261837/140‑1 (MQ=255)                                  aGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCca                                                                                                  >  1:538888/1‑140 (MQ=255)                                    ttttcCGAGAGCTTTTTGCCCCGTGCGGTCAATTTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCGGCGCCCGAGGCGCGGTAAGCGGCTGGTAATGCGG‑CCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACaa                                                                                               <  2:691200/139‑1 (MQ=17)                                    gTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCcaca                                                                                                >  1:1330727/1‑140 (MQ=255)                                    gTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCcaca                                                                                                >  1:613713/1‑140 (MQ=255)                                        tCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGACATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGc                                                                                            >  2:1164921/1‑140 (MQ=255)                                               ccTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAg                                                                                     <  1:329100/140‑1 (MQ=255)                                               ccTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAg                                                                                     <  1:957322/140‑1 (MQ=255)                                                cTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGc                                                                                    <  1:259666/140‑1 (MQ=255)                                                 ttttGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGct                                                                                   <  1:335560/140‑1 (MQ=255)                                                 ttttGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGct                                                                                   <  1:531774/140‑1 (MQ=255)                                                 ttttGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGct                                                                                   <  2:726786/140‑1 (MQ=255)                                                 ttttGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGct                                                                                   <  1:518569/140‑1 (MQ=255)                                                 ttttGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGct                                                                                   <  2:727198/140‑1 (MQ=255)                                                      cACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCtcctcc                                                                              <  2:748945/140‑1 (MQ=255)                                                      cACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCtcctcc                                                                              <  1:825406/140‑1 (MQ=255)                                                          gTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCa                                                                          >  1:597304/1‑140 (MQ=255)                                                           tGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCaa                                                                         >  1:1319049/1‑140 (MQ=255)                                                           tGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCaa                                                                         <  2:613713/140‑1 (MQ=255)                                                                  cAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCa                                                                  <  1:915690/140‑1 (MQ=255)                                                                      ttGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAagt                                                              <  2:120201/140‑1 (MQ=255)                                                                         atatCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAagtagt                                                           <  1:25332/140‑1 (MQ=255)                                                                          tatCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGtc                                                          >  1:966010/1‑140 (MQ=255)                                                                          tatCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGtc                                                          <  1:1127107/140‑1 (MQ=255)                                                                                cAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCatcatc                                                    <  2:816048/140‑1 (MQ=255)                                                                                         tCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGt                                           >  1:403049/1‑140 (MQ=255)                                                                                            tGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGc                                        >  1:1277256/1‑140 (MQ=255)                                                                                                 cTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCg                                   >  2:629406/1‑140 (MQ=255)                                                                                                    aaCAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGc                                >  1:425305/1‑140 (MQ=255)                                                                                                    aaCAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGc                                <  2:296240/140‑1 (MQ=255)                                                                                                        gcagcGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGt                            <  2:1277256/140‑1 (MQ=255)                                                                                                        gcagcGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGt                            <  2:1282671/140‑1 (MQ=255)                                                                                                          agcGCACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCt                          <  2:966010/140‑1 (MQ=255)                                                                                                           gcgcACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTg                         >  2:559263/1‑140 (MQ=255)                                                                                                           gcgcACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTg                         >  1:1396748/1‑140 (MQ=255)                                                                                                           gcgcACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTAGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTg                         >  1:635178/1‑140 (MQ=255)                                                                                                            cgcACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTgg                        >  1:443693/1‑140 (MQ=255)                                                                                                              cACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTgggg                      >  2:45097/1‑140 (MQ=255)                                                                                                              cACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTgggg                      <  2:760252/140‑1 (MQ=255)                                                                                                              cACGAAGCGCGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCAGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTgggg                      >  1:1139562/1‑140 (MQ=255)                                                                                                                    gcgcGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTGGGGGTTAcc                <  2:281183/140‑1 (MQ=255)                                                                                                                    gcgcGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTGGGGGTTAcc                <  2:154846/140‑1 (MQ=255)                                                                                                                    gcgcGGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTGGGGGTTAcc                <  1:644719/140‑1 (MQ=255)                                                                                                                       cgGTAAGCAGCTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTGGGGGTTACCACg             <  1:857811/140‑1 (MQ=255)                                                                                                                              cagcTGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTGGGGGTTACCACGGGTACgg      <  1:286904/140‑1 (MQ=255)                                                                                                                                  tGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTGGGGGTTACCACGGGTACGGGGGa  <  2:1396748/140‑1 (MQ=255)                                                                                                                                  tGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTGGGGGTTACCACGGGTACGGGGGa  <  1:442434/140‑1 (MQ=255)                                                                                                                                  tGGTCATGCCGCCCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTGGGGGTTACCACGGGTACGGGGGa  <  1:31113/140‑1 (MQ=255)                                                                                                                                             |                                                                                                                                 CCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGCGCACGAAGCGCGGTAAGCAGCTGGTCATGCCG‑CCCCTTCTCCAGGCTGGCACCGGAGGCCTCCACAACGCTGCAAAGCTCCTCCTGCAACATGTCAAAGTAGTCATCATCCAGATCGGTGGCAGGCGTGCCGGTCTGGGGGTTACCACGGGTACGGGGGA  >  NC_000913/2471863‑2472130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑