| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 92 (1.110) | 59/276 | 0.2 | 96.8% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3766089 | 3 (0.040) | coding (3907/4134 nt) | rhsA | rhs element protein RhsA | |||||
TTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACCTTTTACGAGCAAAAGC > NC_000913/3653101‑3653367 | tttCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGaca > 2:1052226/1‑140 (MQ=32) gTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑ttt > 2:52713/1‑140 (MQ=37) cTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑ttttt < 1:52713/140‑1 (MQ=40) tGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑tttttt < 2:420480/140‑1 (MQ=40) aCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTa > 2:1349645/1‑140 (MQ=255) aCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTa > 1:664853/1‑140 (MQ=255) cGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTAc < 1:1286555/140‑1 (MQ=255) ggCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACa < 2:301828/140‑1 (MQ=255) ggCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACa < 2:251919/140‑1 (MQ=255) gcTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATaa > 2:792528/1‑140 (MQ=255) gcTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATaa > 2:291409/1‑140 (MQ=255) cTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATaaa < 1:1272800/140‑1 (MQ=255) aCTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGATAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGaa < 2:244111/140‑1 (MQ=255) aCTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGaa < 2:915986/140‑1 (MQ=255) aCTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGaa < 2:664853/140‑1 (MQ=255) aCTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGaa < 2:266123/140‑1 (MQ=255) ctgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAac < 1:1188918/140‑1 (MQ=255) ctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACAcc < 1:291409/140‑1 (MQ=255) ctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACAcc < 2:1115258/140‑1 (MQ=255) ctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACAcc < 2:1369869/140‑1 (MQ=255) ctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACAcc < 1:792528/140‑1 (MQ=255) ctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACAcc < 2:339729/140‑1 (MQ=255) tgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAATAccc < 2:401388/140‑1 (MQ=255) gAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAac < 1:650668/135‑1 (MQ=255) gAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAac > 2:650668/1‑135 (MQ=255) gAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCt < 1:1241683/140‑1 (MQ=255) ttCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACAt > 1:720423/1‑125 (MQ=255) ttCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACAt < 2:720423/125‑1 (MQ=255) aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTAccccc < 1:114163/140‑1 (MQ=255) aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTAccccc < 2:243656/140‑1 (MQ=255) aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTAccccc > 2:226509/1‑140 (MQ=255) aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTAccccc < 2:848665/140‑1 (MQ=255) aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTAccccc < 1:1052226/140‑1 (MQ=255) cTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTATTTTTTTTACATAAAGAACACCCTAccccc < 2:621045/140‑1 (MQ=255) gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCaaa < 2:733263/140‑1 (MQ=255) gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCaaa < 1:147363/140‑1 (MQ=255) gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCaaa < 1:151582/140‑1 (MQ=255) gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCaaa < 1:226509/140‑1 (MQ=255) gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCaaa < 2:536864/140‑1 (MQ=255) cGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAAtt > 2:544925/1‑140 (MQ=255) cGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATtata < 1:544925/140‑1 (MQ=255) aGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATaa < 2:64893/140‑1 (MQ=255) tAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGa < 1:1349645/140‑1 (MQ=255) tAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGa > 2:446175/1‑140 (MQ=255) aGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATg > 1:1366551/1‑140 (MQ=255) tgatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCCCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGAc < 2:590791/140‑1 (MQ=255) atgatgAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTg > 1:746530/1‑140 (MQ=255) aaCCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGacaaac < 1:974246/140‑1 (MQ=255) gTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAATTTATTAAAAGTTGGCCAATATCTTACCAACCAAAtga > 1:24268/1‑138 (MQ=21) gTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCg > 2:302045/1‑140 (MQ=255) aTGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGt < 2:444881/140‑1 (MQ=255) tGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGtt > 1:1246122/1‑140 (MQ=255) cTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTAt > 2:234587/1‑140 (MQ=255) ccAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTAttt > 2:632747/1‑140 (MQ=255) cAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTAtttt < 2:1366551/140‑1 (MQ=255) gATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCa > 1:1065974/1‑140 (MQ=255) aTGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCaa < 1:234587/140‑1 (MQ=255) atgcAAACAATGATCTAATATCAGGACTTTGTCCGC‑CCTTCCTTTAGGTGACCTTA‑TTTTTTTCCATAAA‑AACCCCCCTCCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAAc < 2:24268/137‑1 (MQ=255) aTGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTaa < 2:1065974/140‑1 (MQ=255) aTGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTaa < 1:302045/140‑1 (MQ=255) aTCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCa > 2:379053/1‑140 (MQ=255) tatCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATg > 2:279051/1‑140 (MQ=255) atCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGa < 2:1348969/140‑1 (MQ=255) cAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACa > 1:1088900/1‑140 (MQ=255) ggACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAAcc > 1:649643/1‑140 (MQ=255) cTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCAtt < 1:85339/127‑1 (MQ=255) cTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCAtt > 2:85339/1‑127 (MQ=255) ttGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACCtttt < 2:746530/140‑1 (MQ=255) tGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACCTTTTa > 1:1280231/1‑140 (MQ=255) tGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACCTTTTa > 1:958909/1‑140 (MQ=255) gTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTAGATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACCTTTTAc > 2:1239624/1‑140 (MQ=255) tcc‑ttAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACCTTTTACGAGCAAAAGc > 2:482377/1‑140 (MQ=255) tcc‑ttAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACCTTTTACGAGCAAAAGc < 1:446175/140‑1 (MQ=255) | TTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAC‑ATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑TTAGGTGACACTA‑TTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACCTTTTACGAGCAAAAGC > NC_000913/3653101‑3653367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |