BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	460,213	A→G	E442E (GAA→GAG)	lon →	Lon protease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	460,213	0	A	G	100.0%	377.2 / NA	102	E442E (GAA→GAG)	lon	Lon protease
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (50/52); total (50/52)

Only 100 of 102 total aligned reads displayed.

TACATCGGTTCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGAAGTGA  >  NC_000913/460079‑460349

tACATCGGTTCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCt                                                                                                                                     <  2:1311583/140‑1 (MQ=255)

tACATCGGTTCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCt                                                                                                                                     <  1:1230329/140‑1 (MQ=255)

   aTCGGTTCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGa                                                                                                                                  >  2:91686/1‑140 (MQ=255)

     cGGTTCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATc                                                                                                                                <  1:997114/140‑1 (MQ=255)

       gTTCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCa                                                                                                                              >  1:1331550/1‑140 (MQ=255)

        ttCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCag                                                                                                                             >  1:98923/1‑140 (MQ=255)

        ttCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCag                                                                                                                             >  2:1188883/1‑140 (MQ=255)

        ttCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCag                                                                                                                             >  2:1147240/1‑140 (MQ=255)

        ttCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCag                                                                                                                             >  2:80070/1‑140 (MQ=255)

        ttCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCag                                                                                                                             >  1:189037/1‑140 (MQ=255)

               ccGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGaa                                                                                                                      >  2:405822/1‑140 (MQ=255)

                 gggTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACg                                                                                                                    >  1:611781/1‑140 (MQ=255)

                  ggTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGa                                                                                                                       >  1:890544/1‑136 (MQ=255)

                  ggTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGa                                                                                                                       <  2:890544/136‑1 (MQ=255)

                  ggTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGt                                                                                                                   >  1:1317837/1‑140 (MQ=255)

                  ggTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGt                                                                                                                   >  2:122481/1‑140 (MQ=255)

                  ggTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGt                                                                                                                   >  1:249030/1‑140 (MQ=255)

                  ggTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGt                                                                                                                   >  1:433686/1‑140 (MQ=255)

                  ggTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGt                                                                                                                   >  1:1075386/1‑140 (MQ=255)

                  ggTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGt                                                                                                                   >  2:660865/1‑140 (MQ=255)

                   gTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTa                                                                                                                  <  1:80070/140‑1 (MQ=255)

                     aaaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAACCCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGc                                                                                                                >  1:176173/1‑140 (MQ=255)

                     aaaCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGc                                                                                                                <  2:843500/140‑1 (MQ=255)

                       aCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGt                                                                                                              >  2:364641/1‑140 (MQ=255)

                       aCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGt                                                                                                              <  2:383863/140‑1 (MQ=255)

                       aCTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGt                                                                                                              >  2:418546/1‑140 (MQ=255)

                          gATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCa                                                                                                           <  2:189037/140‑1 (MQ=255)

                           aTCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAg                                                                                                          <  1:1036980/140‑1 (MQ=255)

                            tCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGc                                                                                                         >  1:825803/1‑140 (MQ=255)

                            tCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGc                                                                                                         <  1:1188883/140‑1 (MQ=255)

                              cAGAAAATGGCGAAAGTGGGCGTGAAAACCCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGa                                                                                                       <  2:176173/140‑1 (MQ=255)

                              cAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGa                                                                                                       <  1:49735/140‑1 (MQ=255)

                               aGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGAc                                                                                                      <  2:1312380/140‑1 (MQ=255)

                               aGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGAc                                                                                                      <  2:517017/140‑1 (MQ=255)

                               aGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGAc                                                                                                      <  2:516564/140‑1 (MQ=255)

                               aGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGAc                                                                                                      <  1:210002/140‑1 (MQ=255)

                               aGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGAc                                                                                                      <  1:845018/140‑1 (MQ=255)

                               aGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGAc                                                                                                      <  1:1042091/140‑1 (MQ=255)

                                 aaaaTGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCa                                                                                                    >  1:874253/1‑140 (MQ=255)

                                     tGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGAc                                                                                                      >  2:552582/1‑134 (MQ=255)

                                     tGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGAc                                                                                                      <  2:1212476/134‑1 (MQ=255)

                                     tGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGAc                                                                                                      <  1:552582/134‑1 (MQ=255)

                                     tGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGAc                                                                                                      >  1:1212476/1‑134 (MQ=255)

                                         gAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTgg                                                                                            <  1:1185661/140‑1 (MQ=255)

                                             gTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGt                                                                                        <  2:1317837/140‑1 (MQ=255)

                                             gTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGt                                                                                        <  2:433686/140‑1 (MQ=255)

                                                ggCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGa                                                                                     >  2:605896/1‑140 (MQ=255)

                                                ggCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGa                                                                                     >  1:446298/1‑140 (MQ=255)

                                                    tGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTAc                                                                                 <  1:756965/140‑1 (MQ=255)

                                                      aaaaaCCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGa                                                                               <  1:438507/140‑1 (MQ=255)

                                                           cccGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCa                                                                          >  2:759137/1‑140 (MQ=255)

                                                           cccGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCa                                                                          <  1:1147240/140‑1 (MQ=255)

                                                               cTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGa                                                                      >  2:1381292/1‑140 (MQ=255)

                                                                tGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGAc                                                                     >  2:1185097/1‑140 (MQ=255)

                                                                            aTGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTc                                                         >  2:234349/1‑140 (MQ=255)

                                                                            aTGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTc                                                         >  1:3084/1‑140 (MQ=255)

                                                                            aTGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTc                                                         >  1:1222601/1‑140 (MQ=255)

                                                                             tGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTcg                                                        <  1:1082613/140‑1 (MQ=255)

                                                                                 aTCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTcgcg                                                      >  1:734054/1‑138 (MQ=255)

                                                                                 aTCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTcgcg                                                      <  2:734054/138‑1 (MQ=255)

                                                                                  tCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACg                                                   >  2:381342/1‑140 (MQ=255)

                                                                                   cGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGt                                                  >  2:580110/1‑140 (MQ=255)

                                                                                           tGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTc                                                 <  1:65504/133‑1 (MQ=255)

                                                                                           tGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTc                                                 >  2:65504/1‑133 (MQ=255)

                                                                                           tGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTcc                                          >  1:948040/1‑140 (MQ=255)

                                                                                           tGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTcc                                          >  1:715389/1‑140 (MQ=255)

                                                                                              cttctGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATg                                       <  2:825803/140‑1 (MQ=255)

                                                                                                tctGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGaa                                     <  2:681672/140‑1 (MQ=255)

                                                                                                    aCATGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACAtt                                 >  2:1136133/1‑140 (MQ=255)

                                                                                                       tGCGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCg                              >  2:500369/1‑140 (MQ=255)

                                                                                                         cGTGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGc                            >  1:414432/1‑140 (MQ=255)

                                                                                                           tGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTTGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          <  2:1249290/140‑1 (MQ=255)

                                                                                                           tGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          <  1:119507/140‑1 (MQ=255)

                                                                                                           tGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          <  2:727805/140‑1 (MQ=255)

                                                                                                           tGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          <  2:1331550/140‑1 (MQ=255)

                                                                                                           tGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          <  1:580110/140‑1 (MQ=255)

                                                                                                           tGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          <  1:605896/140‑1 (MQ=255)

                                                                                                           tGGCGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          <  1:97263/140‑1 (MQ=255)

                                                                                                              cGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          >  2:798776/1‑137 (MQ=255)

                                                                                                              cGATCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          <  1:798776/137‑1 (MQ=255)

                                                                                                                 tCCGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCgctgc                    >  2:1219642/1‑140 (MQ=255)

                                                                                                                  ccGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCgctgct                   <  2:611781/140‑1 (MQ=255)

                                                                                                                   cGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          <  1:129615/132‑1 (MQ=255)

                                                                                                                   cGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCAc                          >  2:129615/1‑132 (MQ=255)

                                                                                                                   cGGCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGctgctg                  >  2:326899/1‑140 (MQ=255)

                                                                                                                     gCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGa                <  1:91686/140‑1 (MQ=255)

                                                                                                                     gCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGa                <  2:1222429/140‑1 (MQ=255)

                                                                                                                     gCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGa                <  1:122481/140‑1 (MQ=255)

                                                                                                                     gCCTCTGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGa                <  2:249030/140‑1 (MQ=255)

                                                                                                                        tctGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCg             >  2:544812/1‑140 (MQ=255)

                                                                                                                          tGCACTGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTa           <  1:544812/140‑1 (MQ=255)

                                                                                                                               tGCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACATCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGaa      >  1:814540/1‑140 (MQ=255)

                                                                                                                                gCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGa                <  2:93077/129‑1 (MQ=255)

                                                                                                                                gCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGa                >  1:93077/1‑129 (MQ=255)

                                                                                                                                gCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGa       >  1:152960/1‑138 (MQ=255)

                                                                                                                                gCTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGa       <  2:152960/138‑1 (MQ=255)

                                                                                                                                 cTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGAAGt    >  1:546964/1‑140 (MQ=255)

                                                                                                                                 cTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCAAACTCCATGAACATTCCGGCACCGCTGCTGGATc              >  1:26589/1‑130 (MQ=255)

                                                                                                                                 cTTGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCAAACTCCATGAACATTCCGGCACCGCTGCTGGATc              <  2:26589/130‑1 (MQ=255)

                                                                                                                                   tGAGGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGAAGTGa  <  2:3084/140‑1 (MQ=255)

TACATCGGTTCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGAAGTGA  >  NC_000913/460079‑460349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`