BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	966,280	T→C	V654A (GTG→GCG)	ycaI →	conserved inner membrane protein YcaI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	966,280	0	T	C	100.0%	418.8 / NA	115	V654A (GTG→GCG)	ycaI	conserved inner membrane protein YcaI
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (55/60); total (55/60)

Only 100 of 117 total aligned reads displayed.

ACAAGGTAGCAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGTGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGCCCTCTAACAA  >  NC_000913/966146‑966415

aCAAGGTAGCAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAgg                                                                                                                                    >  1:206003/1‑140 (MQ=255)

 cAAGGTAGCAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGc                                                                                                                                   <  2:206003/140‑1 (MQ=255)

 cAAGGTAGCAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGc                                                                                                                                   <  1:1252416/140‑1 (MQ=255)

    ggTAGCAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAAc                                                                                                                                >  2:930429/1‑140 (MQ=255)

     gTAGCAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACa                                                                                                                               <  2:35688/140‑1 (MQ=255)

      tAGCAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACAt                                                                                                                              >  1:445062/1‑140 (MQ=255)

         cAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACa                                                                                                                               >  2:1077805/1‑136 (MQ=255)

         cAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACa                                                                                                                               <  1:1077805/136‑1 (MQ=255)

         cAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGc                                                                                                                           >  2:1042916/1‑140 (MQ=255)

          aaCGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCt                                                                                                                          <  1:394546/140‑1 (MQ=255)

          aaCGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCt                                                                                                                          <  2:682102/140‑1 (MQ=255)

          aaCGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCt                                                                                                                          <  1:1355918/140‑1 (MQ=255)

            cGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTc                                                                                                                        <  2:113830/140‑1 (MQ=255)

            cGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTc                                                                                                                        <  2:42463/140‑1 (MQ=255)

            cGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTc                                                                                                                        <  2:954128/140‑1 (MQ=255)

             gATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAGCAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCa                                                                                                                       <  2:835800/140‑1 (MQ=255)

              aTAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCt                                                                                                                          <  1:1192138/136‑1 (MQ=255)

              aTAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCt                                                                                                                          >  2:1192138/1‑136 (MQ=255)

              aTAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAg                                                                                                                      >  2:817325/1‑140 (MQ=255)

              aTAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAg                                                                                                                      >  2:113996/1‑140 (MQ=255)

              aTAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAg                                                                                                                      <  1:817325/140‑1 (MQ=255)

              aTAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAg                                                                                                                      >  2:1343945/1‑140 (MQ=255)

              aTAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAg                                                                                                                      >  1:1200460/1‑140 (MQ=255)

                  aGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTAc                                                                                                                  >  1:1074948/1‑140 (MQ=255)

                      aaTAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCa                                                                                                              >  2:657591/1‑140 (MQ=255)

                       aTAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCAc                                                                                                             <  2:334643/140‑1 (MQ=255)

                        tAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCAcc                                                                                                            <  2:1074948/140‑1 (MQ=255)

                          agcATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCAt                                                                                                          <  2:337465/138‑1 (MQ=255)

                          aCCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCAt                                                                                                          <  2:172607/140‑1 (MQ=255)

                          aCCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCAt                                                                                                          <  1:854329/140‑1 (MQ=255)

                          aCCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCAt                                                                                                          <  2:445062/140‑1 (MQ=255)

                           ccATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATg                                                                                                         <  1:535322/140‑1 (MQ=255)

                           ccATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATg                                                                                                         <  1:1343945/140‑1 (MQ=255)

                             aTTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGc                                                                                                       <  2:299977/140‑1 (MQ=255)

                              ttCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCa                                                                                                      <  2:440239/140‑1 (MQ=255)

                               tCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAg                                                                                                     >  2:928426/1‑140 (MQ=255)

                                ccTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGt                                                                                                    <  2:468231/140‑1 (MQ=255)

                                  tgtgtgGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTaa                                                                                                  <  1:333211/140‑1 (MQ=255)

                                  tgtgtgGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTaa                                                                                                  >  1:192835/1‑140 (MQ=255)

                                   gtgtgGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAAt                                                                                                 >  2:27045/1‑140 (MQ=255)

                                    tgtgGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATa                                                                                                >  2:790908/1‑140 (MQ=255)

                                    tgtgGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATa                                                                                                >  2:1324870/1‑140 (MQ=255)

                                         ttAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCtca                                                                                           >  1:1044948/1‑140 (MQ=255)

                                         ttAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCtca                                                                                           <  1:1042916/140‑1 (MQ=255)

                                           aaGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCtcatc                                                                                         >  2:722619/1‑140 (MQ=255)

                                              gTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCatcatc                                                                                      >  2:1353461/1‑140 (MQ=255)

                                               ttGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCg                                                                                     <  1:722619/140‑1 (MQ=255)

                                               ttGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCg                                                                                     <  1:1008159/140‑1 (MQ=255)

                                                 gatgaCGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGtt                                                                                   <  2:891043/140‑1 (MQ=255)

                                                 gatgaCGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGtt                                                                                   <  2:1044948/140‑1 (MQ=255)

                                                  atgaCGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTg                                                                                  >  2:404269/1‑140 (MQ=255)

                                                  atgaCGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTg                                                                                  >  1:19668/1‑140 (MQ=255)

                                                       gggACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGtt                                                                                   >  2:228369/1‑134 (MQ=255)

                                                       gggACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGtt                                                                                   <  1:228369/134‑1 (MQ=255)

                                                        ggACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTa                                                                            >  2:1067367/1‑140 (MQ=255)

                                                                 gCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGa                                                                   >  1:1328921/1‑140 (MQ=255)

                                                                   aTTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGt                                                                 >  1:865939/1‑140 (MQ=255)

                                                                      cttctAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGaa                                                              <  1:1247340/140‑1 (MQ=255)

                                                                       ttctAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAAt                                                             >  2:984416/1‑140 (MQ=255)

                                                                       ttctAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAAt                                                             >  2:1276630/1‑140 (MQ=255)

                                                                       ttctAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAAt                                                             >  2:712267/1‑140 (MQ=255)

                                                                        tctAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATg                                                            >  1:858382/1‑140 (MQ=255)

                                                                        tctAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATg                                                            >  1:614808/1‑140 (MQ=255)

                                                                           aaCCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGaa                                                         <  1:217696/140‑1 (MQ=255)

                                                                            aCCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGaaa                                                        >  1:1348747/1‑140 (MQ=255)

                                                                                 tGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTgg                                                   >  2:801843/1‑140 (MQ=255)

                                                                                 tGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTgg                                                   >  1:467982/1‑140 (MQ=255)

                                                                                 tGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTgg                                                   >  2:1272838/1‑140 (MQ=255)

                                                                                   atatTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCa                                                 <  1:1385643/140‑1 (MQ=255)

                                                                                   atatTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCa                                                 <  1:801843/140‑1 (MQ=255)

                                                                                   atatTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCa                                                 >  1:690130/1‑140 (MQ=255)

                                                                                       tGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCg                                             <  1:645930/140‑1 (MQ=255)

                                                                                           gCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCa                                                 >  1:768160/1‑132 (MQ=255)

                                                                                           gCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCgcatc                                         >  2:433325/1‑140 (MQ=255)

                                                                                             cccAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCgcatcgg                                       >  2:235304/1‑140 (MQ=255)

                                                                                               cAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCgcatcggca                                     >  2:1136481/1‑140 (MQ=255)

                                                                                                aGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCgcatcggcat                                    >  2:1303653/1‑140 (MQ=255)

                                                                                                aGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCgcatcggcat                                    >  1:391276/1‑140 (MQ=255)

                                                                                                aGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCgcatcggcat                                    <  1:928426/140‑1 (MQ=255)

                                                                                                aGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGAAAAAGTGGCACTCgcatcggcat                                    >  2:726128/1‑140 (MQ=255)

                                                                                                  cTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCgcatcggcatcg                                  <  1:1324870/140‑1 (MQ=255)

                                                                                                  cTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCgcatcggcatcg                                  <  1:930429/140‑1 (MQ=255)

                                                                                                  cTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCgcatcggcatcg                                  <  2:192835/140‑1 (MQ=255)

                                                                                                                 tAAGCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATgg                   >  1:1277193/1‑140 (MQ=255)

                                                                                                                    gCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGa                <  1:640500/140‑1 (MQ=255)

                                                                                                                    gCCGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGa                >  1:810330/1‑140 (MQ=255)

                                                                                                                     ccGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGAc               <  1:790908/140‑1 (MQ=255)

                                                                                                                     ccGTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGAc               <  1:1272838/140‑1 (MQ=255)

                                                                                                                       gTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTg             <  1:235304/140‑1 (MQ=255)

                                                                                                                       gTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTg             <  2:542456/140‑1 (MQ=255)

                                                                                                                       gTTACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTg             <  1:1136481/140‑1 (MQ=255)

                                                                                                                        ttACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCta                             <  1:841648/123‑1 (MQ=255)

                                                                                                                        ttACTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCta                             >  2:841648/1‑123 (MQ=255)

                                                                                                                          aCTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGccc          <  1:712267/140‑1 (MQ=255)

                                                                                                                          aCTGGCAGCAAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGccc          <  1:984416/140‑1 (MQ=255)

                                                                                                                               cagcaAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGCCCTCTaa     <  2:690130/140‑1 (MQ=255)

                                                                                                                                agcaAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGCCCTCTAAc    >  2:450701/1‑140 (MQ=255)

                                                                                                                                 gcaAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGCCCTCTAACa   <  2:865939/140‑1 (MQ=255)

                                                                                                                                  caAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGCCCTCTAACaa  >  2:133034/1‑140 (MQ=255)

                                                                                                                                  caAGCGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGCCCTCTAACaa  >  2:213697/1‑140 (MQ=255)

ACAAGGTAGCAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGTGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGCCCTCTAACAA  >  NC_000913/966146‑966415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`