Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,138,393	A→G	N6D (AAT→GAT)	flgK →	flagellar hook‑filament junction protein 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,138,393	0	A	G	100.0%	273.8 / NA	77	N6D (AAT→GAT)	flgK	flagellar hook‑filament junction protein 1
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (46/31);  total (46/31)

TAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGC  >  NC_000913/1138260‑1138526                                                                                                                                      |                                                                                                                                      tAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACg                                                                                                                                 >  2:556667/1‑140 (MQ=255)   aGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGcc                                                                                                                               <  1:1293397/140‑1 (MQ=255)        cAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAg                                                                                                                          <  1:691284/140‑1 (MQ=255)           ggTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCgg                                                                                                                       >  2:313784/1‑140 (MQ=255)               aGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTg                                                                                                                   >  2:1290962/1‑140 (MQ=255)                 cAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGaa                                                                                                                 >  1:1030878/1‑140 (MQ=255)                 cAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGaa                                                                                                                 >  2:790593/1‑140 (MQ=255)                 cAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGaa                                                                                                                 >  1:1002619/1‑140 (MQ=255)                  aaaaCCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCCCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAAc                                                                                                                <  1:1068199/140‑1 (MQ=255)                   aaaCCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAAcg                                                                                                               <  2:1030878/140‑1 (MQ=255)                      ccTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCgg                                                                                                            >  2:884107/1‑140 (MQ=255)                      ccTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCgg                                                                                                            >  2:536821/1‑140 (MQ=255)                          cAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCa                                                                                                        >  2:874632/1‑140 (MQ=255)                            gTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAgg                                                                                                      <  2:83899/140‑1 (MQ=255)                            gTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAgg                                                                                                      <  2:130558/140‑1 (MQ=255)                            gTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAgg                                                                                                      <  2:670540/140‑1 (MQ=255)                            gTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAgg                                                                                                      >  2:215791/1‑140 (MQ=255)                            gTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAgg                                                                                                      <  1:524747/140‑1 (MQ=255)                              aTGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAggcg                                                                                                    <  1:1382563/140‑1 (MQ=255)                              aTGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAggcg                                                                                                    <  1:579771/140‑1 (MQ=255)                               tGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAggcgg                                                                                                   >  2:377716/1‑140 (MQ=255)                                      tGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTaaa                                                                                            >  2:1055360/1‑140 (MQ=255)                                       gATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAAt                                                                                           >  2:453916/1‑140 (MQ=255)                                            tCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGc                                                                                      <  1:453916/140‑1 (MQ=255)                                            tCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGc                                                                                      >  2:752207/1‑140 (MQ=255)                                              tGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCaa                                                                                    >  2:1038318/1‑140 (MQ=255)                                                ttCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAggcg                                                                                                    >  2:259955/1‑122 (MQ=255)                                                ttCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAggcg                                                                                                    <  1:259955/122‑1 (MQ=255)                                                ttCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGt                                                                                  >  2:365805/1‑140 (MQ=255)                                                 tCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGta                                                                                 <  1:1153491/140‑1 (MQ=255)                                                     aaTAACTCAAGTCCGGCGGGTCGCTGTCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGtaataa                                                                             >  2:655619/1‑140 (MQ=255)                                                          cTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATAtct                                                                        >  2:189381/1‑140 (MQ=255)                                                          cTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATAtct                                                                        >  2:670722/1‑140 (MQ=255)                                                          cTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATAtct                                                                        >  2:429404/1‑140 (MQ=255)                                                           tCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATAtctc                                                                       <  1:752207/140‑1 (MQ=255)                                                           tCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATAtctc                                                                       <  1:556667/140‑1 (MQ=255)                                                           tCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATAtctc                                                                       <  1:884107/140‑1 (MQ=255)                                                           tCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATAtctc                                                                       <  2:916037/140‑1 (MQ=255)                                                               gTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGc                                                                   >  2:1222957/1‑140 (MQ=255)                                                                  cggcggGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCtat                                                                <  2:1097439/140‑1 (MQ=255)                                                                      gggTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACg                                                            <  1:670722/140‑1 (MQ=255)                                                                        gTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGtt                                                          <  2:1002619/140‑1 (MQ=255)                                                                         tCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTg                                                         >  2:112914/1‑140 (MQ=255)                                                                                        ctctGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGcc                                          <  1:215791/140‑1 (MQ=255)                                                                                         tctGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCa                                         <  1:1290962/140‑1 (MQ=255)                                                                                         tctGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCa                                         >  1:617603/1‑140 (MQ=255)                                                                                           tGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATAccggc                                           <  2:128763/136‑4 (MQ=255)                                                                                           tGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCGGc                                           >  1:128763/1‑136 (MQ=255)                                                                                            gTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAAc                                      >  2:1204200/1‑140 (MQ=255)                                                                                            gTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAAc                                      >  2:1387727/1‑140 (MQ=255)                                                                                             tAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAAcc                                     >  2:151865/1‑140 (MQ=255)                                                                                              aaTTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCa                                    <  1:655619/140‑1 (MQ=255)                                                                                              aaTTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCa                                    >  2:756209/1‑140 (MQ=255)                                                                                                     ggCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACtattat                             >  1:1279689/1‑140 (MQ=255)                                                                                                     ggCTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACtattat                             >  1:686286/1‑140 (MQ=255)                                                                                                       cTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATgg                           <  1:1222957/140‑1 (MQ=255)                                                                                                       cTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATgg                           >  2:454166/1‑140 (MQ=255)                                                                                                       cTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATgg                           >  1:1262236/1‑140 (MQ=255)                                                                                                       cTTATAAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATgg                           >  1:834305/1‑140 (MQ=255)                                                                                                         tataAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGgcg                         <  1:454166/140‑1 (MQ=255)                                                                                                         tataAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGgcg                         <  1:1279158/140‑1 (MQ=255)                                                                                                         tataAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGgcg                         <  1:112914/140‑1 (MQ=255)                                                                                                           taAGGAACCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCa                       <  1:1387727/140‑1 (MQ=255)                                                                                                              ggAACCTCCATGTCCAGTTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGc                    <  1:874632/140‑1 (MQ=255)                                                                                                                aaCCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCa                  >  2:4490/1‑140 (MQ=255)                                                                                                                aaCCTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCa                  >  1:826955/1‑140 (MQ=255)                                                                                                                  ccTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAAt                >  1:386852/1‑140 (MQ=255)                                                                                                                  ccTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAAt                >  1:515094/1‑140 (MQ=255)                                                                                                                  ccTCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGCCGCAGGCCAAt                >  2:395960/1‑140 (MQ=255)                                                                                                                    tCCATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAg              >  1:922875/1‑140 (MQ=255)                                                                                                                     ccATGTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGc             >  2:625067/1‑140 (MQ=255)                                                                                                                         gTCCAGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGt         >  1:925980/1‑140 (MQ=255)                                                                                                                             aGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTggg     >  1:225368/1‑140 (MQ=255)                                                                                                                             aGCTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTggg     >  1:1092071/1‑140 (MQ=255)                                                                                                                               cTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGgcg   >  2:451536/1‑140 (MQ=255)                                                                                                                               cTTGATTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGgcg   >  2:958099/1‑140 (MQ=255)                                                                                                                                ttgattgaTAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGgcgc  >  1:456939/1‑140 (MQ=255)                                                                                                                                   aTTGATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAg              <  1:312751/125‑1 (MQ=255)                                                                                                                                      |                                                                                                                                      TAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGC  >  NC_000913/1138260‑1138526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑