BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,294,216	G→A	intergenic (+72/+210)	tdk → / ← insZ	thymidine/deoxyuridine kinase/putative transposase InsZ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,294,216	0	G	A	100.0%	452.7 / NA	127	intergenic (+72/+210)	tdk/insZ	thymidine/deoxyuridine kinase/putative transposase InsZ
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (56/71); total (56/71)

Only 100 of 127 total aligned reads displayed.

ACTATAAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGGGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCAAATATGATG  >  NC_000913/1294080‑1294350

acTATAAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCt                                                                                                                                     <  2:612220/140‑1 (MQ=255)

  tataAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCtat                                                                                                                                   <  2:981272/140‑1 (MQ=255)

  tataAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCtat                                                                                                                                   >  1:1129024/1‑140 (MQ=255)

  tataAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCtat                                                                                                                                   >  1:1353055/1‑140 (MQ=255)

   ataAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCtata                                                                                                                                  >  1:809318/1‑140 (MQ=255)

   ataAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCtata                                                                                                                                  >  2:850346/1‑140 (MQ=255)

   ataAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCtata                                                                                                                                  >  2:1151513/1‑140 (MQ=255)

     aaaGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAACTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCtatata                                                                                                                                <  1:264564/140‑1 (MQ=255)

         agGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCt                                                                                                                            >  1:1291006/1‑140 (MQ=255)

         agGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCt                                                                                                                            >  2:914675/1‑140 (MQ=255)

          ggCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCtt                                                                                                                           >  2:217836/1‑140 (MQ=255)

          ggCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCtt                                                                                                                           >  1:247124/1‑140 (MQ=255)

           gCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTtc                                                                                                                          >  2:418381/1‑140 (MQ=255)

            cGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTtct                                                                                                                         >  1:1323488/1‑140 (MQ=255)

              ttACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCg                                                                                                                       >  2:709237/1‑140 (MQ=255)

                aCAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCATTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGc                                                                                                                     >  1:1067898/1‑140 (MQ=255)

                     tCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGttt                                                                                                                >  2:839117/1‑140 (MQ=255)

                       gACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGttttt                                                                                                              >  1:269556/1‑140 (MQ=255)

                        aCTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGtttttt                                                                                                             >  1:1157429/1‑140 (MQ=255)

                         cTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCgg                                                                                                                      >  1:659429/1‑130 (MQ=255)

                         cTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTa                                                                                                            >  1:493835/1‑140 (MQ=255)

                          tCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTaa                                                                                                           <  2:1088669/140‑1 (MQ=255)

                          tCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTaa                                                                                                           <  1:62813/140‑1 (MQ=255)

                           cATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAAc                                                                                                          <  1:671636/140‑1 (MQ=255)

                            aTTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGtttttt                                                                                                             <  2:65059/136‑1 (MQ=255)

                            aTTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAAcg                                                                                                         <  1:3555/140‑1 (MQ=255)

                                 cGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCt                                                                                                    <  1:670049/140‑1 (MQ=255)

                                      aTTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACg                                                                                               <  1:436782/140‑1 (MQ=255)

                                      aTTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACg                                                                                               >  1:629084/1‑140 (MQ=255)

                                      aTTCAGAAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACg                                                                                               >  1:250882/1‑140 (MQ=255)

                                       ttCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGAGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGc                                                                                              >  1:1280232/1‑140 (MQ=255)

                                        tCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGcc                                                                                             >  1:173274/1‑140 (MQ=255)

                                              aaGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAg                                                                                       >  1:1261420/1‑140 (MQ=255)

                                              aaGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAg                                                                                       <  2:518469/140‑1 (MQ=255)

                                                ggCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAggg                                                                                     <  1:735504/140‑1 (MQ=255)

                                                ggCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAggg                                                                                     <  1:166557/140‑1 (MQ=255)

                                                 gCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGc                                                                                    >  2:640114/1‑140 (MQ=255)

                                                    tCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGctct                                                                                 <  1:1031546/140‑1 (MQ=255)

                                                      gCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTcaca                                                                                        >  1:715068/1‑131 (MQ=255)

                                                      gCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTcaca                                                                                        <  2:715068/131‑1 (MQ=255)

                                                      gCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAggg                                                                                     >  2:298415/1‑134 (MQ=255)

                                                      gCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAggg                                                                                     <  2:530933/134‑1 (MQ=255)

                                                      gCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAggg                                                                                     >  1:530933/1‑134 (MQ=255)

                                                          cGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCa                                                                           <  2:809318/140‑1 (MQ=255)

                                                          cGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCa                                                                           <  2:812823/140‑1 (MQ=255)

                                                          cGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCa                                                                           <  2:1324831/140‑1 (MQ=255)

                                                             ttAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCg                                                                        <  2:1323488/140‑1 (MQ=255)

                                                                  aaGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGtt                                                                   <  2:247124/140‑1 (MQ=255)

                                                                       tttCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACtt                                                              >  2:994736/1‑140 (MQ=255)

                                                                          cTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTtgtg                                                           <  2:834100/140‑1 (MQ=255)

                                                                            ttACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGAc                                                         <  1:850346/140‑1 (MQ=255)

                                                                            ttACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGAc                                                         <  1:952843/140‑1 (MQ=255)

                                                                               cTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTtgt                                                            <  2:873893/134‑1 (MQ=255)

                                                                               cTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTg                                                      <  2:96827/140‑1 (MQ=255)

                                                                               cTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTg                                                      <  1:1151513/140‑1 (MQ=255)

                                                                               cTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTg                                                      >  2:915209/1‑140 (MQ=255)

                                                                                  aCAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTaa                                                   <  2:1092789/140‑1 (MQ=255)

                                                                                  aCAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTaa                                                   <  2:530172/140‑1 (MQ=255)

                                                                                  aCAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTaa                                                   >  2:301165/1‑140 (MQ=255)

                                                                                  aCAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTaa                                                   >  2:531526/1‑140 (MQ=255)

                                                                                    aGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAg                                                 <  2:1303314/140‑1 (MQ=255)

                                                                                    aGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGCCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAg                                                 <  1:500359/140‑1 (MQ=255)

                                                                                     gggTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGt                                                >  2:390001/1‑140 (MQ=255)

                                                                                      ggTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTa                                               <  2:1129024/140‑1 (MQ=255)

                                                                                      ggTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTa                                               <  1:914675/140‑1 (MQ=255)

                                                                                      ggTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTa                                               <  2:173274/140‑1 (MQ=255)

                                                                                      ggTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTa                                               <  1:217836/140‑1 (MQ=255)

                                                                                            cAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGAc                                                         <  1:849466/124‑1 (MQ=255)

                                                                                            cAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAatat                                         >  2:598493/1‑140 (MQ=255)

                                                                                               ggCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATccc                                      <  2:250882/140‑1 (MQ=255)

                                                                                                gCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTa                                                    <  1:998003/125‑1 (MQ=255)

                                                                                                gCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCt                                     >  1:196934/1‑140 (MQ=255)

                                                                                                gCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCt                                     <  1:960110/140‑1 (MQ=255)

                                                                                                gCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCt                                     >  1:525087/1‑140 (MQ=255)

                                                                                                  aCTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCtgt                                   >  1:778428/1‑140 (MQ=255)

                                                                                                    ttttATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTgtgt                                 >  2:1020145/1‑140 (MQ=255)

                                                                                                     tttATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGtt                                <  1:390001/140‑1 (MQ=255)

                                                                                                      ttATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGttt                               <  2:1067898/140‑1 (MQ=255)

                                                                                                       tATCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTa                              <  2:1210683/140‑1 (MQ=255)

                                                                                                        aTCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAg                             <  2:1291006/140‑1 (MQ=255)

                                                                                                        aTCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAg                             <  1:709237/140‑1 (MQ=255)

                                                                                                        aTCCTGGCAGTTCGTTTTACGCACTTCTTCCGAGCTATATGCCCTTCTCGGCAGTTTTTGAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAg                             <  2:1280232/140‑1 (MQ=255)

                                                                                                         tCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAgg                            <  2:493835/140‑1 (MQ=255)

                                                                                                         tCCTGTCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAgg                            <  1:1163001/140‑1 (MQ=255)

                                                                                                              tCAGTTCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTta                       >  2:1052869/1‑140 (MQ=255)

                                                                                                                   tCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACAt                  <  2:1157429/140‑1 (MQ=255)

                                                                                                                   tCGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACAt                  <  2:1383633/140‑1 (MQ=255)

                                                                                                                    cGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAg                             <  1:1011193/128‑1 (MQ=255)

                                                                                                                    cGTTTTACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAg                             >  2:1011193/1‑128 (MQ=255)

                                                                                                                        ttACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACAtcgtcg             <  1:301165/140‑1 (MQ=255)

                                                                                                                         tACGCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGc            <  2:1353055/140‑1 (MQ=255)

                                                                                                                            gCACTTCTTCCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCaaa         >  2:1328625/1‑140 (MQ=255)

                                                                                                                                ttcttcCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCAAATatg     <  1:531526/140‑1 (MQ=255)

                                                                                                                                ttcttcCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCAAATatg     >  1:674320/1‑140 (MQ=255)

                                                                                                                                 tcttcCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCAAATatga    <  1:915209/140‑1 (MQ=255)

                                                                                                                                   ttcCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCAAATatgatg  <  2:706238/140‑1 (MQ=255)

                                                                                                                                   ttcCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCAAATatgatg  <  1:1328625/140‑1 (MQ=255)

                                                                                                                                   ttcCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCAAATatgatg  <  1:1284261/140‑1 (MQ=255)

                                                                                                                                   ttcCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCAAATatgatg  <  2:1261420/140‑1 (MQ=255)

                                                                                                                                   ttcCGAGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCAAATatgatg  <  1:1097518/140‑1 (MQ=255)

ACTATAAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGGGCTATATACCCTTCTCGGCAGTTTTTTAACGCCGCTATACGCCTCACAGGGCTCTTAAGCACCGACGTTGACTTGTGACCTGTAAAGTACAATATCCCTGTGTTTAGGCGTTATACATCGTCGCAAATATGATG  >  NC_000913/1294080‑1294350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`