Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	289,119	T→G	D15A (GAC→GCC)	xynR ←	CP4‑6 prophage; DNA‑binding transcriptional repressor XynR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	289,119	0	T	G	100.0%	264.3 / NA	73	D15A (GAC→GCC)	xynR	CP4‑6 prophage; DNA‑binding transcriptional repressor XynR
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (38/35);  total (38/35)

GCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCC  >  NC_000913/288983‑289253                                                                                                                                         |                                                                                                                                       gCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGTGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGa                                                                                                                                     >  2:1055034/1‑140 (MQ=255)   cGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCC‑GCTCGTTGAACAGGGCGAGGa                                                                                                                                  >  2:374921/1‑140 (MQ=255)      tctcCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATc                                                                                                                                >  1:735236/1‑140 (MQ=255)            ggTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAAc                                                                                                                          <  2:725794/140‑1 (MQ=255)            ggTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAAc                                                                                                                          <  2:199984/140‑1 (MQ=255)              ttCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGc                                                                                                                        <  1:1054383/140‑1 (MQ=255)              ttCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGc                                                                                                                        <  1:987579/140‑1 (MQ=255)                    tCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCC‑GCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCa                                                                                                                 <  1:374921/140‑1 (MQ=255)                     cGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCa                                                                                                                 <  1:1148332/140‑1 (MQ=255)                      gATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCa                                                                                                                 >  2:1341477/1‑139 (MQ=255)                      gATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCa                                                                                                                 <  1:1341477/139‑1 (MQ=255)                         ataGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAg                                                                                                             <  2:976434/140‑1 (MQ=255)                          taGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGa                                                                                                            <  1:831575/140‑1 (MQ=255)                                  aaGCTGCAGGGTTTTTTGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGaataa                                                                                                    >  1:1397255/1‑140 (MQ=255)                                  aaGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGaataa                                                                                                    >  2:120998/1‑140 (MQ=255)                                  aaGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGGTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGaataa                                                                                                    >  2:605826/1‑140 (MQ=255)                                   aGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGaataat                                                                                                   <  2:677159/140‑1 (MQ=255)                                      tGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCgg                                                                                                >  2:943002/1‑140 (MQ=255)                                       gCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGc                                                                                               >  1:1279287/1‑140 (MQ=255)                                       gCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGc                                                                                               >  1:549068/1‑140 (MQ=255)                                        cAGGGTTTTTAGCAGCGAGTGGAGGGTGCTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCa                                                                                              <  2:768711/140‑1 (MQ=255)                                        cAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCa                                                                                              <  1:120998/140‑1 (MQ=255)                                        cAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCa                                                                                              <  2:89924/140‑1 (MQ=255)                                        cAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCa                                                                                              >  1:89924/1‑140 (MQ=255)                                                  agcagcGAGTGGTGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGc                                                                                    <  1:1055034/140‑1 (MQ=255)                                                       cGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTc                                                                               >  2:936261/1‑140 (MQ=255)                                                         aGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCa                                                                             >  1:791937/1‑140 (MQ=255)                                                         aGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCa                                                                             >  1:1335810/1‑140 (MQ=255)                                                                  tACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAAt                                                                    >  1:758315/1‑140 (MQ=255)                                                                          cTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGa                                                            >  1:751061/1‑140 (MQ=255)                                                                          cTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGa                                                            >  2:626198/1‑140 (MQ=255)                                                                          cTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGa                                                            >  2:728720/1‑140 (MQ=255)                                                                            cAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGaaa                                                          >  1:1134082/1‑140 (MQ=255)                                                                            cAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGaaa                                                          >  2:1083779/1‑140 (MQ=255)                                                                              gCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAAc                                                        >  1:703716/1‑140 (MQ=255)                                                                                 ccATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTa                                                     >  2:1347033/1‑140 (MQ=255)                                                                                 ccATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTAGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGACATGTCCACGCTGGAATTAAGGCGAAAACGTa                                                     >  2:1234461/1‑140 (MQ=255)                                                                                        tttGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTTGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCttttt                                              >  1:487883/1‑140 (MQ=255)                                                                                        tttGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCttttt                                              >  1:164896/1‑140 (MQ=255)                                                                                         ttGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTc                                             >  1:1268601/1‑140 (MQ=255)                                                                                          tGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCg                                            >  2:81081/1‑140 (MQ=255)                                                                                           gCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCgg                                           <  2:1268601/140‑1 (MQ=255)                                                                                                tGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGa                                      >  2:118394/1‑140 (MQ=255)                                                                                                  tCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGaaa                                    >  1:223740/1‑140 (MQ=255)                                                                                                          cTTAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATg                            <  2:703716/140‑1 (MQ=255)                                                                                                            tAAGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGaa                          >  2:610631/1‑140 (MQ=255)                                                                                                              aGCTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAAt                        <  1:936261/140‑1 (MQ=255)                                                                                                                cTCGGTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATgg                      >  2:510013/1‑140 (MQ=255)                                                                                                                   ggTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGc                   >  1:1357139/1‑140 (MQ=255)                                                                                                                   ggTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGc                   >  1:173819/1‑140 (MQ=255)                                                                                                                    gTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGcc                  <  1:943002/140‑1 (MQ=255)                                                                                                                    gTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGcc                  <  1:1083779/140‑1 (MQ=255)                                                                                                                    gTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGcc                  <  1:1234461/140‑1 (MQ=255)                                                                                                                    gTGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGcc                  >  1:796884/1‑140 (MQ=255)                                                                                                                     tGGCCTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCg                 <  2:1335810/140‑1 (MQ=255)                                                                                                                        ccTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGgtg              <  1:728720/140‑1 (MQ=255)                                                                                                                        ccTGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGgtg              <  2:1397255/140‑1 (MQ=255)                                                                                                                          tGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGtt            <  1:118394/140‑1 (MQ=255)                                                                                                                          tGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGtt            <  2:1357139/140‑1 (MQ=255)                                                                                                                          tGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGtt            <  2:735236/140‑1 (MQ=255)                                                                                                                          tGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGtt            >  2:1204903/1‑140 (MQ=255)                                                                                                                          tGCTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGtt            <  2:319455/140‑1 (MQ=255)                                                                                                                            cTCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtct          >  1:283569/1‑140 (MQ=255)                                                                                                                             tCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtctc         >  2:713124/1‑140 (MQ=255)                                                                                                                             tCGTTGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtctc         >  1:234950/1‑140 (MQ=255)                                                                                                                                ttGAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtctccct      <  2:549068/140‑1 (MQ=255)                                                                                                                                  gAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtctccctct    <  1:713124/140‑1 (MQ=255)                                                                                                                                  gAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtctccctct    <  1:1204903/140‑1 (MQ=255)                                                                                                                                  gAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtctccctct    <  2:796884/140‑1 (MQ=255)                                                                                                                                  gAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtctccctct    <  2:1279287/140‑1 (MQ=255)                                                                                                                                  gAACAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtctccctct    <  2:283569/140‑1 (MQ=255)                                                                                                                                    aCAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtctccctctcc  <  1:605826/140‑1 (MQ=255)                                                                                                                                    aCAGGGCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTtctccctctcc  <  2:791937/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                       GCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGATGAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCTCC  >  NC_000913/288983‑289253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑