BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,699,776	T→C	C38C (TGT→TGC)	yfhL →	putative 4Fe‑4S cluster‑containing protein YfhL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,699,776	0	T	C	100.0%	437.1 / NA	121	C38C (TGT→TGC)	yfhL	putative 4Fe‑4S cluster‑containing protein YfhL
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (64/57); total (64/57)

Only 100 of 121 total aligned reads displayed.

TGTTGTTTTGAGAGTTTCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGTACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTTGTGCTGATGCACCAC  >  NC_000913/2699642‑2699908

tgttgtTTTGAGAGTTTCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGa                                                                                                                                 <  2:449661/140‑1 (MQ=255)

tgttgtTTTGAGAGTTTCCTTATGGCGTTGTTAATCACT‑‑AAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAAt                                                                                                                               <  1:1325670/140‑1 (MQ=255)

  ttgttTTGAGAGTTTCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAAt                                                                                                                               >  1:509382/1‑140 (MQ=255)

    gttTTGAGAGTTTCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGc                                                                                                                             >  1:1070601/1‑140 (MQ=255)

    gttTTGAGAGTTTCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGc                                                                                                                             >  2:314253/1‑140 (MQ=255)

     ttttGAGAGTTTCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCg                                                                                                                            <  1:254258/140‑1 (MQ=255)

     ttttGAGAGTTTCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCg                                                                                                                            >  1:189232/1‑140 (MQ=255)

          agagTTTCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGCGATTAACAGCGATAAGTGCACCGAATGCGTAggg                                                                                                                       <  2:1239279/140‑1 (MQ=255)

          agagTTTCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCG‑ATGCGTAGGGc                                                                                                                      >  2:81660/1‑140 (MQ=255)

               ttCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTa                                                                                                                  >  2:103265/1‑140 (MQ=255)

                     aTGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGac                                                                                                            <  2:946205/140‑1 (MQ=255)

                         cGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCa                                                                                                        <  1:114344/140‑1 (MQ=255)

                           ttgttAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAAc                                                                                                      >  2:1254246/1‑140 (MQ=255)

                           ttgttAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAAc                                                                                                      >  1:570227/1‑140 (MQ=255)

                           ttgttAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAAc                                                                                                      >  1:863005/1‑140 (MQ=255)

                           ttgttAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAAc                                                                                                      >  2:1104910/1‑140 (MQ=255)

                           ttgttAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAAc                                                                                                      <  2:537916/140‑1 (MQ=255)

                           ttgttAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAAc                                                                                                      >  2:97375/1‑140 (MQ=255)

                            tgttAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAAcc                                                                                                     >  1:777506/1‑140 (MQ=255)

                                aaTCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGG‑‑GATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAg                                                                                               >  2:545627/1‑140 (MQ=255)

                                 aTCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCa                                                                                                <  2:52299/140‑1 (MQ=255)

                                  tCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAg                                                                                               <  2:509382/140‑1 (MQ=255)

                                   cACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGGTTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGa                                                                                              <  1:969895/140‑1 (MQ=255)

                                   cACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGa                                                                                              <  2:590522/140‑1 (MQ=255)

                                   cACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGa                                                                                              >  1:732450/1‑140 (MQ=255)

                                      tAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCATAGGGCACTACGAGACACCAACCTGCCAGAAgg                                                                                           >  2:1113489/1‑140 (MQ=255)

                                         aaaaTGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGgtgt                                                                                        <  2:290742/140‑1 (MQ=255)

                                            aTGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGcc                                                                                     <  2:863005/140‑1 (MQ=255)

                                              gCATCAATTGTGATATGTGTGAACCCGAATGCCCGAGTGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCg                                                                                   <  1:830539/140‑1 (MQ=255)

                                              gCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCTCg                                                                                   <  2:843552/140‑1 (MQ=255)

                                              gCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCg                                                                                   <  2:1005618/140‑1 (MQ=255)

                                              gCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCg                                                                                   <  1:922350/140‑1 (MQ=255)

                                              gCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCg                                                                                   <  2:1264916/140‑1 (MQ=255)

                                              gCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCg                                                                                   <  2:470398/140‑1 (MQ=255)

                                              gCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACCAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCg                                                                                   <  2:973549/140‑1 (MQ=255)

                                                aTCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGAt                                                                                 >  1:756062/1‑140 (MQ=255)

                                                aTCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGAt                                                                                 >  1:729950/1‑140 (MQ=255)

                                                aTCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGAt                                                                                 >  1:1065206/1‑140 (MQ=255)

                                                aTCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGAt                                                                                 >  1:1339359/1‑140 (MQ=255)

                                                 tCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATc                                                                                <  2:729950/140‑1 (MQ=255)

                                                 tCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATc                                                                                <  2:372813/140‑1 (MQ=255)

                                                   aaTTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATccc                                                                              <  1:1104910/140‑1 (MQ=255)

                                                    aTTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAg                                                                                            >  2:1095245/1‑125 (MQ=255)

                                                    aTTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAg                                                                                            <  1:1095245/125‑1 (MQ=255)

                                                        tgATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCG‑ATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATAc                                                                        <  1:81660/140‑1 (MQ=255)

                                                        tgATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTACACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATa                                                                         <  1:314253/140‑1 (MQ=255)

                                                           tatGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTa                                                                      <  2:570227/140‑1 (MQ=255)

                                                             tgtgtgAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTagt                                                                    >  2:950219/1‑138 (MQ=255)

                                                              gtgtgAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCaa                                                                           >  1:1072844/1‑132 (MQ=255)

                                                               tgtgAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCg                                                                                   <  2:454137/123‑1 (MQ=255)

                                                               tgtgAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCg                                                                                   >  1:454137/1‑123 (MQ=255)

                                                               tgtgAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATtgt                                                                  >  2:365543/1‑140 (MQ=255)

                                                               tgtgAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATtgt                                                                  >  1:113656/1‑140 (MQ=255)

                                                                gtgAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATtgtg                                                                 >  2:1154923/1‑140 (MQ=255)

                                                                  gAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGaa                                                               <  2:450705/140‑1 (MQ=255)

                                                                   aaCCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGaaa                                                              >  1:1196093/1‑140 (MQ=255)

                                                                   aaCCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGaa                                                               >  1:1056725/1‑139 (MQ=255)

                                                                   aaCCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGaa                                                               <  2:1056725/139‑1 (MQ=255)

                                                                    aCCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAg                                                             >  2:1134827/1‑140 (MQ=255)

                                                                    aCCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAg                                                             >  1:800096/1‑140 (MQ=255)

                                                                         aatgcccgaatgAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTa                                                                      >  2:784704/1‑126 (MQ=255)

                                                                         aatgcccgaatgAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTa                                                                      <  1:784704/126‑1 (MQ=255)

                                                                         aatgcccgaatgAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCg                                                        >  1:78750/1‑140 (MQ=255)

                                                                         aatgcccgaatgAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCg                                                        >  2:151266/1‑140 (MQ=255)

                                                                         aatgcccgaatgAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCg                                                        >  2:1007179/1‑140 (MQ=255)

                                                                         aatgcccgaatgAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCg                                                        >  2:749573/1‑140 (MQ=255)

                                                                            gcccgaatgAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGgcg                                                     <  2:33260/140‑1 (MQ=255)

                                                                            gcccgaatgAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGgcg                                                     <  1:1007179/140‑1 (MQ=255)

                                                                                    gAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCga                                             <  2:1196093/140‑1 (MQ=255)

                                                                                    gAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCga                                             <  2:800096/140‑1 (MQ=255)

                                                                                      ggCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCgaga                                           <  2:1339359/140‑1 (MQ=255)

                                                                                       gCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGAc                                          <  2:824497/140‑1 (MQ=255)

                                                                                       gCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGAc                                          >  1:338617/1‑140 (MQ=255)

                                                                                         gATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACag                                        <  1:510100/140‑1 (MQ=255)

                                                                                            ttCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACagaag                                     >  1:614053/1‑140 (MQ=255)

                                                                                              cAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAgaagaa                                   <  1:1154923/140‑1 (MQ=255)

                                                                                                   ggAGATCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGtt                              <  2:777506/140‑1 (MQ=255)

                                                                                                    gagaTCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTtg                             <  1:876187/140‑1 (MQ=255)

                                                                                                        tCATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTggg                         >  2:594019/1‑140 (MQ=255)

                                                                                                         cATATCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGa                        <  2:338617/140‑1 (MQ=255)

                                                                                                           tatCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATa                      >  2:310523/1‑140 (MQ=255)

                                                                                                             tCTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATaaa                    >  1:675246/1‑140 (MQ=255)

                                                                                                              cTACGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAAt                   >  2:29822/1‑140 (MQ=255)

                                                                                                                 cGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                <  1:416848/140‑1 (MQ=255)

                                                                                                                 cGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                <  1:749573/140‑1 (MQ=255)

                                                                                                                 cGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                >  2:812279/1‑140 (MQ=255)

                                                                                                                 cGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                <  1:1254246/140‑1 (MQ=255)

                                                                                                                 cGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                <  1:983395/140‑1 (MQ=255)

                                                                                                                 cGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                >  1:1241391/1‑140 (MQ=255)

                                                                                                                 cGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                <  2:675246/140‑1 (MQ=255)

                                                                                                                 cGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                <  2:1092187/140‑1 (MQ=255)

                                                                                                                 cGAGATTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                >  2:547782/1‑140 (MQ=255)

                                                                                                                  gagaTTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtgt               <  1:29822/140‑1 (MQ=255)

                                                                                                                  gagaTTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                <  2:710155/139‑1 (MQ=255)

                                                                                                                  gagaTTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtg                >  1:710155/1‑139 (MQ=255)

                                                                                                                   agaTTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTtgtg              >  2:1397204/1‑140 (MQ=255)

                                                                                                                     aTTAACAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTTGTGCt            >  2:166423/1‑140 (MQ=255)

                                                                                                                         aCAGCGATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTTGTGCTGATg        >  1:695853/1‑140 (MQ=255)

                                                                                                                              gATAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTTGTGCTGATGcacca   >  2:358879/1‑140 (MQ=255)

                                                                                                                               aTAAGTGCACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTTGTGCTGATGcaccac  >  2:281713/1‑140 (MQ=255)

TGTTGTTTTGAGAGTTTCCTTATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGTACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTTGTGCTGATGCACCAC  >  NC_000913/2699642‑2699908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`