Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,773,137	C→T	pseudogene (46/1016 nt)	yfjV ←	CP4‑57 prophage; putative arsenite transporter, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,773,137	0	C	T	100.0%	284.8 / NA	82	pseudogene (46/1016 nt)	yfjV	CP4‑57 prophage; putative arsenite transporter, N‑terminal fragment
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (42/40);  total (42/40)

CAGGCTGGCCGTATCTGCAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGCATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAATGAAATTGGTTGCTAGAAAGTCGATGATTTGTTGCG  >  NC_000913/2773001‑2773273                                                                                                                                         |                                                                                                                                         cAGGCTGGCCGTATCTGCAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATc                                                                                                                                       <  2:1151970/140‑1 (MQ=255) cAGGCTGGCCGTATCTGCAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATc                                                                                                                                       <  1:863715/140‑1 (MQ=255)   ggCTGGCCGTATCTGCAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCaa                                                                                                                                     >  1:1167041/1‑140 (MQ=255)        gCCGTATCTGCAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCg                                                                                                                                >  1:878481/1‑140 (MQ=255)        gCCGTATCTGCAATAAATCCTGAAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCg                                                                                                                                >  1:694443/1‑140 (MQ=255)           gTATCTGCAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCa                                                                                                                             <  1:827073/140‑1 (MQ=255)              tCTGCAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGGATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCg                                                                                                                          >  2:323590/1‑140 (MQ=255)               cTGCAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGa                                                                                                                         >  2:575599/1‑140 (MQ=255)                tGCAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAg                                                                                                                        <  1:817534/140‑1 (MQ=255)                  cAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCa                                                                                                                      >  2:920546/1‑140 (MQ=255)                   aaTAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGGATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCaa                                                                                                                     <  1:323590/140‑1 (MQ=255)                   aaTAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCaa                                                                                                                     >  2:825896/1‑140 (MQ=255)                       aaTCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACt                                                                                                                 >  2:1366597/1‑140 (MQ=255)                       aaTCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACt                                                                                                                 >  2:106050/1‑140 (MQ=255)                        aTCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACtt                                                                                                                <  1:106050/140‑1 (MQ=255)                              cAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAgg                                                                                                          >  2:1337820/1‑140 (MQ=255)                                   aTGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAAc                                                                                                     >  2:1180210/1‑140 (MQ=255)                                   aTGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAAc                                                                                                     >  1:1357943/1‑140 (MQ=255)                                   aTGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAAc                                                                                                     <  1:1337820/140‑1 (MQ=255)                                    tGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACa                                                                                                    <  2:1176990/140‑1 (MQ=255)                                          aGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGctc                                                                                              <  1:1366597/140‑1 (MQ=255)                                          aGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGctc                                                                                              <  1:1118189/140‑1 (MQ=255)                                              cAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCtagg                                                                                          >  1:511706/1‑140 (MQ=255)                                               aGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCtaggt                                                                                         >  2:483494/1‑140 (MQ=255)                                               aGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCtaggt                                                                                         <  2:1060820/140‑1 (MQ=255)                                               aGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCtaggt                                                                                         <  1:920546/140‑1 (MQ=255)                                                gtgtCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCtaggta                                                                                        >  2:523914/1‑140 (MQ=255)                                                gtgtCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCtaggta                                                                                        >  1:530150/1‑140 (MQ=255)                                                  gtCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGctc                                                                                              >  2:821427/1‑132 (MQ=255)                                                  gtCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGctc                                                                                              <  1:821427/132‑1 (MQ=255)                                                      tGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACt                                                                                  >  1:1116501/1‑140 (MQ=255)                                                      tGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACt                                                                                  >  1:66741/1‑140 (MQ=255)                                                      tGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACt                                                                                  >  1:560244/1‑140 (MQ=255)                                                      tGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACt                                                                                  >  2:600852/1‑140 (MQ=255)                                                      tGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACt                                                                                  >  2:364243/1‑140 (MQ=255)                                                      tGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACt                                                                                  >  1:511813/1‑140 (MQ=255)                                                      tGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACt                                                                                  >  2:525254/1‑140 (MQ=255)                                                      tGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACt                                                                                  >  2:1383928/1‑140 (MQ=255)                                                        cccTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACttt                                                                                <  1:373868/140‑1 (MQ=255)                                                           tGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGt                                                                              >  2:484800/1‑139 (MQ=255)                                                           tGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGt                                                                              <  1:484800/139‑1 (MQ=255)                                                            ggttGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCg                                                                            <  1:828360/137‑1 (MQ=255)                                                            ggCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCg                                                                            <  2:1167041/140‑1 (MQ=255)                                                                  aCCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATa                                                                      >  1:693481/1‑140 (MQ=255)                                                                  aCCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATa                                                                      <  1:600852/140‑1 (MQ=255)                                                                   cccAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATag                                                                     <  1:483494/140‑1 (MQ=255)                                                                       gTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTc                                                                 >  1:170274/1‑140 (MQ=255)                                                                       gTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTc                                                                 >  2:256124/1‑140 (MQ=255)                                                                        tGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCt                                                                >  1:814898/1‑140 (MQ=255)                                                                         gCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCtt                                                               <  2:511706/140‑1 (MQ=255)                                                                         gCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCtt                                                               <  1:583524/140‑1 (MQ=255)                                                                         gCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCtt                                                               <  1:574043/140‑1 (MQ=255)                                                                           gATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCa                                                             <  1:885899/140‑1 (MQ=255)                                                                           gATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCa                                                             <  2:699794/140‑1 (MQ=255)                                                                              cAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGcc                                                          <  1:1180210/140‑1 (MQ=255)                                                                                gCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCAt                                                        <  2:1116501/140‑1 (MQ=255)                                                                                gCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCAt                                                        <  2:814898/140‑1 (MQ=255)                                                                                gCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCAt                                                        <  2:123036/140‑1 (MQ=255)                                                                                gCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCAt                                                        <  2:170274/140‑1 (MQ=255)                                                                                gCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCAt                                                        <  2:878481/140‑1 (MQ=255)                                                                                 cATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATc                                                       >  1:767338/1‑140 (MQ=255)                                                                                  aTCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCa                                                      >  2:5330/1‑140 (MQ=255)                                                                                    cGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAac                                                    <  1:1163217/140‑1 (MQ=255)                                                                                     gCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGTCATCAaca                                                   <  1:232316/140‑1 (MQ=255)                                                                                     gCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAaca                                                   <  2:693481/140‑1 (MQ=255)                                                                                     gCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAaca                                                   <  2:767338/140‑1 (MQ=255)                                                                                      cAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAacac                                                  >  2:1013945/1‑140 (MQ=255)                                                                                              aTCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGa                                          >  2:4399/1‑140 (MQ=255)                                                                                              aTCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGa                                          >  2:317698/1‑140 (MQ=255)                                                                                              aTCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGa                                          >  2:1010977/1‑140 (MQ=255)                                                                                              aTCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGa                                          <  1:364243/140‑1 (MQ=255)                                                                                               tCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAg                                         <  1:1383928/140‑1 (MQ=255)                                                                                                 ggCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCTAGTa                                       >  1:129599/1‑140 (MQ=255)                                                                                                   cGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAAt                                     >  1:1022033/1‑140 (MQ=255)                                                                                                   cGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAAt                                     >  1:289533/1‑140 (MQ=255)                                                                                                   cGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAAt                                     <  1:1013945/140‑1 (MQ=255)                                                                                                       aGGATCAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAATGaaa                                 >  2:467428/1‑140 (MQ=255)                                                                                                            cAGCGCGGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAATGAAATTGGt                            <  1:825896/140‑1 (MQ=255)                                                                                                               cgcgGCGCCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAATGAAATTGGTTGc                         >  1:940606/1‑140 (MQ=255)                                                                                                                    cgcCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAATGAAATTGGTTGCTAGaa                    >  1:85730/1‑140 (MQ=255)                                                                                                                    cgcCGTCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAATGAAATTGGTTGCTAGaa                    >  1:375006/1‑140 (MQ=255)                                                                                                                         tCATTGGCAAACAACGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAATGAAATTGGTTGCTAGAAAGTCg               <  2:1357943/140‑1 (MQ=255)                                                                                                                                      acGTATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAATGAAATTGGTTGCTAGAAAGTCGATGATTTGTTGCg  <  2:66741/140‑1 (MQ=255)                                                                                                                                         |                                                                                                                                         CAGGCTGGCCGTATCTGCAATAAATCCTGCAGCCATGACAAAGGCCAGTGTCGTGCCCTGGCTGAACCCAGTGCGATCAGCATCGCAATCACAATCGGCGTCAGGATCAGCGCGGCGCCGTCATTGGCAAACAACGCATCAACAGCGGCACCGAGCAAGACTTTCCAGGTGAACAGCGCTCTAGGTAGGAACTTTGTCGTTGATAGAGTCTTCAGCCATCAACACTGTATCGAGTAATGAAATTGGTTGCTAGAAAGTCGATGATTTGTTGCG  >  NC_000913/2773001‑2773273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑