| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 380,022 | (G)10→11 | intergenic (‑141/+47) | frmR ← / ← yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,012 | 1 | . | G | 84.7% | 267.8 / 39.8 | 85 | intergenic (‑131/+57) | frmR/yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| Reads supporting (aligned to +/- strand): ref base . (10/3); new base G (52/20); total (62/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
TTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCG > NC_000913/379882‑380151 | ttCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gggg‑ggggg > 1:439723/1‑140 (MQ=255) atcatcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCgg > 1:986865/1‑140 (MQ=255) gcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGaa > 2:576443/1‑140 (MQ=255) gcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGaa > 1:244306/1‑140 (MQ=255) tgcaATATACTATAGGGGGGTATTCTATATGTCTATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGgc > 1:1115374/1‑140 (MQ=255) aCTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAGATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCgg > 1:663543/1‑140 (MQ=255) tataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGaa > 2:1092245/1‑139 (MQ=255) taGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCGGGGAAGGCCCCCCCGGATAg > 2:805735/1‑140 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACTAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgc > 1:783541/1‑140 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgc > 2:384231/1‑140 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcg > 1:43919/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg > 2:533323/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg > 1:926465/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CAAATGGGCAGGGAAGGCCCCCCCGGAAAgcgg > 1:1051934/1‑140 (MQ=255) gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTAAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCCCCCCGGATAgcgg > 1:753770/1‑140 (MQ=255) gggggCATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 1:1278623/1‑140 (MQ=255) ggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 1:415914/1‑140 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 2:520508/1‑140 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑a > 2:1056765/1‑140 (MQ=255) tCTATATGTCTATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGa < 2:1115374/140‑1 (MQ=255) tCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGa < 1:576443/140‑1 (MQ=255) tatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGa > 1:334557/1‑140 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GGGGGG‑CTAATCGGCATGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCa > 1:116395/1‑140 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGa < 2:986865/140‑1 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAAt > 2:1090988/1‑140 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCAGGATAGCGGGCGGC‑AGAAGGAATCAGAAt > 2:1083006/1‑140 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAAtt > 1:474775/1‑140 (MQ=255) cccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAgg > 2:542307/1‑140 (MQ=255) ccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGt > 1:90217/1‑140 (MQ=255) cccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTc > 1:323660/1‑140 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAggcc > 2:297412/1‑138 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCa > 1:427607/1‑140 (MQ=255) tataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGa > 1:506238/1‑140 (MQ=255) tataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGa > 1:952647/1‑140 (MQ=255) ataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGAc < 2:415914/140‑1 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGa > 1:632950/1‑122 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGa < 2:632950/122‑1 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCCCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACggg > 1:397003/1‑140 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGc > 2:220499/1‑140 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGc > 1:62880/1‑140 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 2:219938/1‑140 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 2:631260/1‑140 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 1:767979/1‑140 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 2:787810/1‑140 (MQ=255) taACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCa > 2:248453/1‑140 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCaa > 1:1269234/1‑140 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCaa > 2:773611/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGt > 2:1250421/1‑140 (MQ=255) cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGtt > 1:887136/1‑140 (MQ=255) acTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTg > 1:664394/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGGTAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 2:507956/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACggg > 1:285375/1‑129 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:1150421/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:1089596/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:847194/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:448717/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCCCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 2:582157/1‑140 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGGTCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACggg < 2:285375/129‑1 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 1:190524/1‑140 (MQ=255) ggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa < 1:520508/140‑1 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGG‑GGGGGG‑CTAATGGGCGGGGAAGACCCCCCCGGAAAGGGGGCGGA‑AGAGGGAATAAAAATTTCCAGGCCAGCCGGGCTGAAAGTTgaa > 2:116675/1‑138 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg > 1:31436/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg < 2:90217/140‑1 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg > 2:183512/1‑140 (MQ=255) gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg > 1:86741/1‑140 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAATGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAcc > 1:965334/1‑140 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAcc > 2:1267034/1‑140 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGGAGGGGGG‑CTAATCGACAGGGAGGGCCGCCCCGAACAG‑AGGCGGCAAGAGGGATTCAAAATTTCCAGGTACGAGGGGCAACAGGTTGCGGACGGt > 2:433218/1‑140 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AG‑AGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTa > 2:433686/1‑140 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatca < 2:952647/140‑1 (MQ=255) aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatca > 1:496623/1‑140 (MQ=255) ggAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTg < 1:1056765/139‑1 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTg < 1:533323/140‑1 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTg < 1:1250421/140‑1 (MQ=255) aTGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg < 2:1150421/140‑1 (MQ=255) aTGTGGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg < 2:503803/140‑1 (MQ=255) tgtgGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgggg < 2:323660/140‑1 (MQ=255) tgtgGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTgggg < 2:62880/140‑1 (MQ=255) gtgGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg < 2:43919/140‑1 (MQ=255) tgGTCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg < 2:427607/140‑1 (MQ=255) ggggggAAAACAAAGGGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtgt < 2:439723/136‑1 (MQ=255) tCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTg > 2:1062290/1‑132 (MQ=255) tCGGAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTg < 1:1062290/132‑1 (MQ=255) ggAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc < 2:1278623/140‑1 (MQ=255) gAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGCAGGCCCCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc > 2:964306/1‑140 (MQ=255) gAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc > 2:646178/1‑140 (MQ=255) gAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc < 1:773611/140‑1 (MQ=255) gAAAACAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCAGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc < 1:1083006/140‑1 (MQ=255) aaaaCAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAcc < 2:767979/140‑1 (MQ=255) aaCAAAGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAATGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACcac < 2:965334/140‑1 (MQ=255) aaGAGGAAAG‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACtt < 2:334557/140‑1 (MQ=255) a‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCg > 1:407241/1‑140 (MQ=255) | TTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGG‑GGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGC‑AGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCG > NC_000913/379882‑380151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |