| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,883,098 | (C)6→7 | coding (1041/1509 nt) | casA ← | type I‑E CRISPR system Cascade subunit CasA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,883,092 | 1 | . | C | 97.6% | 306.7 / ‑0.3 | 84 | coding (1047/1509 nt) | casA | type I‑E CRISPR system Cascade subunit CasA |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base C (43/39); total (45/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01 | |||||||||||
GCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑CCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCG > NC_000913/2882955‑2883230 | gCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cc < 1:209564/140‑1 (MQ=255)gCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cc < 1:892974/140‑1 (MQ=255)gCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cc < 2:163164/140‑1 (MQ=255)gCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cc < 2:1077012/140‑1 (MQ=255) ccTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑ccc > 1:727732/1‑140 (MQ=255) ccTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑ccc > 1:637598/1‑140 (MQ=255) cTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cccc > 2:955992/1‑140 (MQ=255) cTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cccc > 1:1187685/1‑140 (MQ=255) cTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cccc > 2:326072/1‑140 (MQ=255) tGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cccccc > 2:903006/1‑140 (MQ=255) tGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cccccc > 2:454662/1‑140 (MQ=255) cGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑ccccccca > 2:746213/1‑138 (MQ=255) aGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAAt < 1:326072/140‑1 (MQ=255) aGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAAt < 1:315557/140‑1 (MQ=255) cTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCaa < 1:879828/140‑1 (MQ=255) ttttATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTc > 1:1242388/1‑140 (MQ=255) ttttATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cc > 1:226663/1‑124 (MQ=255) ttttATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑cc < 2:226663/124‑1 (MQ=255) ttATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCaa < 1:746213/140‑1 (MQ=255) aaCCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTg > 2:490922/1‑140 (MQ=255) aaCCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTg > 2:624046/1‑140 (MQ=255) cAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTgcgg < 1:624046/140‑1 (MQ=255) cAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTgcgg < 1:903006/140‑1 (MQ=255) aaCAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTgcggc < 2:1036895/140‑1 (MQ=255) aCAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTgcggcg < 2:45992/140‑1 (MQ=255) cAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGgcgc > 1:793991/1‑140 (MQ=255) gTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCaa < 1:812286/140‑1 (MQ=255) aCTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCaa < 2:394554/137‑1 (MQ=255) aCTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCaa > 1:394554/1‑137 (MQ=255) aCTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAatat > 1:1022245/1‑140 (MQ=255) aCTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAatat > 1:1223678/1‑140 (MQ=255) tATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATAttt < 2:1022245/140‑1 (MQ=255) gTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAAt < 1:454662/140‑1 (MQ=255) gTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAAt < 2:1242388/140‑1 (MQ=255) cacaTTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTc > 1:183132/1‑140 (MQ=255) ccGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAAccg > 1:1279465/1‑140 (MQ=255) gCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCAcgcg > 2:1267133/1‑140 (MQ=255) gCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCAcgcg > 1:642717/1‑140 (MQ=255) gCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCAcgcg > 2:23865/1‑140 (MQ=255) gCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCAcgcg > 2:533219/1‑140 (MQ=255) gCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCAcgcg > 1:413897/1‑140 (MQ=255) gCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCAcgcg > 1:119234/1‑140 (MQ=255) aCCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGAtt > 2:902873/1‑140 (MQ=255) aCCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGAtt < 1:490922/140‑1 (MQ=255) cccTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTc > 1:266376/1‑140 (MQ=255) cccTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTc > 2:846528/1‑140 (MQ=255) tGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCcat > 1:682612/1‑140 (MQ=255) aTTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGa > 2:986231/1‑131 (MQ=255) aTTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGa < 1:986231/131‑1 (MQ=255) aaCATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAATCGCCGCCACGCGATTTCcattttcat < 2:637598/140‑1 (MQ=255) aCATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCcattttcatt < 2:665094/140‑1 (MQ=255) cATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCcattttcattt > 1:1016314/1‑140 (MQ=255) cAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGa > 2:874073/1‑140 (MQ=255) cAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGa > 2:724238/1‑140 (MQ=255) cAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGa > 2:769972/1‑140 (MQ=255) aaCACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCcattttcatttttaa < 2:266376/140‑4 (MQ=255) aaCACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGaa < 2:793991/140‑1 (MQ=255) aaCACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGaa < 1:1197278/140‑1 (MQ=255) aaCACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGaa < 2:119234/140‑1 (MQ=255) cacaTCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGaata < 2:682612/140‑1 (MQ=255) atcatGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATc > 2:585515/1‑140 (MQ=255) catGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCtt > 1:1171378/1‑140 (MQ=255) atGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTa < 1:1146216/140‑1 (MQ=255) gCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTAc < 2:1187685/140‑1 (MQ=255) cGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATc > 2:1268411/1‑130 (MQ=255) cGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATc < 1:1268411/130‑1 (MQ=255) cGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACca > 2:995028/1‑140 (MQ=255) cGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACca > 2:897052/1‑140 (MQ=255) ttCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGaa < 2:1262694/123‑1 (MQ=255) ttCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGaa > 1:1262694/1‑123 (MQ=255) ttCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACcaca > 1:979431/1‑140 (MQ=255) ttCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACcaca > 1:917800/1‑140 (MQ=255) ttCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACcaca > 2:716717/1‑140 (MQ=255) ttCAAGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACcaca > 2:691996/1‑140 (MQ=255) ttCAAGAATAGATGCTTGATTATTACGATAT‑CCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACaa > 2:256824/1‑140 (MQ=255) aaGAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACt < 2:642717/140‑1 (MQ=255) gAATAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCg < 2:979431/140‑1 (MQ=255) tAGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCt < 2:727732/140‑1 (MQ=255) aGATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTg < 2:917800/140‑1 (MQ=255) gATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGa > 2:112886/1‑140 (MQ=255) gATGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGa > 1:760893/1‑140 (MQ=255) aTGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGAt > 2:516743/1‑140 (MQ=255) aTGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGAt > 1:1252096/1‑140 (MQ=255) tGCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGAtt < 1:1267133/140‑1 (MQ=255) gCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGAttt < 1:533219/140‑1 (MQ=255) gCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGAttt < 1:112886/140‑1 (MQ=255) gCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGAttt < 1:691996/140‑1 (MQ=255) gCTTGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGAttt > 2:292368/1‑140 (MQ=255) ttGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTtgt < 1:615927/140‑1 (MQ=255) tGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTtgtg > 1:764644/1‑140 (MQ=255) tGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTtgtg > 1:195283/1‑140 (MQ=255) tGATTATTACGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTtgtg > 1:1070088/1‑140 (MQ=255) tGATTATTACGATAT‑CCCCCCAATACTCAATTCAGGAGGCCTTTGCGGCGCAATTTTTCTGAATTGATTCACAACCGCCGCCACGCGTTTTCAATTTTCTTTTGGAATAATCTTATCTACAACAACTTGGCGGATTtgtt > 2:850255/1‑139 (MQ=255) attaCGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGAt > 2:309033/1‑130 (MQ=255) attaCGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGAt < 1:309033/130‑1 (MQ=255) ttaCGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCatg < 2:760893/140‑1 (MQ=255) tccGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCatga < 1:48960/138‑1 (MQ=255) taCGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCatga < 1:874073/140‑1 (MQ=255) taCGATATCCCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCatga < 1:585515/140‑1 (MQ=255) at‑CCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCg < 1:256824/140‑1 (MQ=255) | GCCTTGCGTAAGGCTGTTTTATATCCCAAACCAACAGTCACTATTTCGTTTATCACATTGCCGTATTGTTGCCACCCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATAT‑CCCCCC‑ATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCATTTTCATTTTGAATAATCTTATCTACCACAACTCGGCTGATTTGTGTCCATGATGGTGCG > NC_000913/2882955‑2883230 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |