BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	263,031	T→C	intergenic (+85/+119)	thrW → / ← ykfN	tRNA‑Thr/YdiA family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	263,031	0	T	C	100.0%	386.3 / NA	101	intergenic (+85/+119)	thrW/ykfN	tRNA‑Thr/YdiA family protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (43/58); total (43/58)

Only 100 of 101 total aligned reads displayed.

GCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTATCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCAATAAAGCTCGAA  >  NC_000913/262897‑263165

gcgcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACg                                                                                                                                    <  1:372196/140‑1 (MQ=255)

gcgcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACg                                                                                                                                    <  2:646983/140‑1 (MQ=255)

 cgcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGa                                                                                                                                   >  1:38989/1‑140 (MQ=255)

 cgcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGa                                                                                                                                   >  1:211687/1‑140 (MQ=255)

 agcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGa                                                                                                                                   >  2:705448/2‑140 (MQ=255)

  gcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGaa                                                                                                                                  >  2:1055219/1‑140 (MQ=255)

  gcATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGaa                                                                                                                                  >  1:143923/1‑140 (MQ=255)

   cATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAg                                                                                                                                 >  2:908219/1‑140 (MQ=255)

   cATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAg                                                                                                                                 >  1:886943/1‑140 (MQ=255)

    aTTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGa                                                                                                                                <  2:143923/140‑1 (MQ=255)

     ttCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGAt                                                                                                                               <  1:1160780/140‑1 (MQ=255)

     ttCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGAt                                                                                                                               <  1:455506/140‑1 (MQ=255)

     ttCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGAt                                                                                                                               <  2:889516/140‑1 (MQ=255)

      tCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTT‑ATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCa                                                                                                                             <  1:234632/140‑1 (MQ=255)

       cGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCa                                                                                                                             <  1:1235088/140‑1 (MQ=255)

       cGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCa                                                                                                                             <  2:169698/140‑1 (MQ=255)

       cGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCa                                                                                                                             <  2:1044292/140‑1 (MQ=255)

       cGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCa                                                                                                                             <  2:818580/140‑1 (MQ=255)

         tAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAAt                                                                                                                           <  2:731472/140‑1 (MQ=255)

              cGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTAt                                                                                                                      <  2:1249043/140‑1 (MQ=255)

                aaGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCt                                                                                                                    >  2:77365/1‑140 (MQ=255)

                aaGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCt                                                                                                                    >  1:1028031/1‑140 (MQ=255)

                   gTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACt                                                                                                                 <  1:705448/140‑1 (MQ=255)

                       tAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCa                                                                                                                             <  1:626344/124‑1 (MQ=255)

                       tAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCa                                                                                                                             >  2:626344/1‑124 (MQ=255)

                             cGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAg                                                                                                      >  1:616544/1‑140 (MQ=255)

                             cGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAg                                                                                                      >  2:147553/1‑140 (MQ=255)

                              gACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAgg                                                                                                     <  2:886943/140‑1 (MQ=255)

                                    tattatCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGAt                                                                                               <  1:362656/140‑1 (MQ=255)

                                    tattatCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTAACATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGAt                                                                                               <  2:271091/140‑1 (MQ=255)

                                     agtatCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATa                                                                                              >  1:964883/3‑140 (MQ=255)

                                          cGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCt                                                                                         <  2:577183/140‑1 (MQ=255)

                                          cGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCt                                                                                         <  1:609097/140‑1 (MQ=255)

                                            gCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTc                                                                                       <  1:147553/140‑1 (MQ=255)

                                            gCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTc                                                                                       <  1:252668/140‑1 (MQ=255)

                                             cACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAgg                                                                                                     >  1:454423/1‑125 (MQ=255)

                                             cACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAgg                                                                                                     <  2:454423/125‑1 (MQ=255)

                                             cACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCg                                                                                      <  2:1252182/140‑1 (MQ=255)

                                             cACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCg                                                                                      <  1:908219/140‑1 (MQ=255)

                                             cACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCg                                                                                      >  1:352106/1‑140 (MQ=255)

                                              aCCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGc                                                                                     >  1:458288/1‑140 (MQ=255)

                                              aCCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGc                                                                                     >  2:187054/1‑140 (MQ=255)

                                               ccATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCt                                                                                    <  2:311231/140‑1 (MQ=255)

                                               ccATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCt                                                                                    <  1:187054/140‑1 (MQ=255)

                                                cATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTc                                                                                   >  1:644394/1‑140 (MQ=255)

                                                cATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTc                                                                                   <  1:1055219/140‑1 (MQ=255)

                                                cATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTc                                                                                   <  1:77365/140‑1 (MQ=255)

                                                cATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTc                                                                                   <  2:359578/140‑1 (MQ=255)

                                                cATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTc                                                                                   >  1:359578/1‑140 (MQ=255)

                                                cATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTc                                                                                   <  2:1028031/140‑1 (MQ=255)

                                                          aaaTTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCg                                                                                      >  1:534469/1‑127 (MQ=255)

                                                          aaaTTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCg                                                                                      <  2:534469/127‑1 (MQ=255)

                                                                 tACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCt                                                                  <  2:380469/140‑1 (MQ=255)

                                                                  aCGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTg                                                                 >  1:210165/1‑140 (MQ=255)

                                                                   cGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGc                                                                <  2:75712/140‑1 (MQ=255)

                                                                        gATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGtt                                                           <  1:267576/140‑1 (MQ=255)

                                                                        gATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGtt                                                           <  2:649586/140‑1 (MQ=255)

                                                                          tCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTa                                                         >  2:576460/1‑140 (MQ=255)

                                                                           cTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAg                                                        <  2:714967/140‑1 (MQ=255)

                                                                             tATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGtt                                                      >  1:549889/1‑140 (MQ=255)

                                                                              aTCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTg                                                     >  1:781422/1‑140 (MQ=255)

                                                                              aTCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTg                                                     >  2:317967/1‑140 (MQ=255)

                                                                                cATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTa                                                   <  2:1027793/140‑1 (MQ=255)

                                                                                  ttCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACCAAAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTac                                                  >  2:286724/1‑140 (MQ=255)

                                                                                   tctcCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTacac                                                <  2:458288/140‑1 (MQ=255)

                                                                                    ctcCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGGAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTAcacc                                               >  1:497762/1‑140 (MQ=255)

                                                                                    ctcCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTAcacc                                               >  1:647118/1‑140 (MQ=255)

                                                                                    ctcCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTAcacc                                               >  1:1111588/1‑140 (MQ=255)

                                                                                    ctcCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTAcacc                                               >  1:472185/1‑140 (MQ=255)

                                                                                     tcCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTAcacca                                              >  1:1111461/1‑140 (MQ=255)

                                                                                     tcCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTAcacca                                              >  2:1168458/1‑140 (MQ=255)

                                                                                        caccaAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTc                                           >  2:810280/1‑140 (MQ=255)

                                                                                             aaaaaTTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTaaa                                      >  2:1085507/1‑140 (MQ=255)

                                                                                                    aTCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAAtg                               <  1:317967/140‑1 (MQ=255)

                                                                                                     tCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAAtgt                              >  2:371286/1‑140 (MQ=255)

                                                                                                     tCTTAATGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAAtgt                              >  2:498760/1‑140 (MQ=255)

                                                                                                         aaTGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTg                          <  1:371286/140‑1 (MQ=255)

                                                                                                         aaTGTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTg                          <  1:498760/140‑1 (MQ=255)

                                                                                                            gTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCa                       <  1:1005461/140‑1 (MQ=255)

                                                                                                            gTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCa                       <  2:211687/140‑1 (MQ=255)

                                                                                                            gTAACAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCa                       <  1:494170/140‑1 (MQ=255)

                                                                                                              aaCAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAAt                     <  2:549889/140‑1 (MQ=255)

                                                                                                              aaCAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAAt                     <  1:1121083/140‑1 (MQ=255)

                                                                                                              aaCAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAAt                     <  2:647118/140‑1 (MQ=255)

                                                                                                              aaCAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAAt                     <  1:125951/140‑1 (MQ=255)

                                                                                                               aCAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAAtg                    >  1:240534/1‑140 (MQ=255)

                                                                                                               aCAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAAtg                    <  1:576460/140‑1 (MQ=255)

                                                                                                                cAGCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAAtgt                   >  2:158659/1‑140 (MQ=255)

                                                                                                                  gCTGGTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATgtgt                 <  2:644394/140‑1 (MQ=255)

                                                                                                                     ggTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAAt                     >  2:403069/1‑133 (MQ=255)

                                                                                                                     ggTGTAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAAt                     <  1:403069/133‑1 (MQ=255)

                                                                                                                      gtgtAAGTAAATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCaa             >  1:416923/1‑140 (MQ=255)

                                                                                                                           agtaaATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCAATAAAg        >  2:803484/1‑140 (MQ=255)

                                                                                                                            gtaaATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCAATAAAGc       <  2:616544/140‑1 (MQ=255)

                                                                                                                            gtaaATTCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCAATAAAGc       <  2:210165/140‑1 (MQ=255)

                                                                                                                                 ttCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCAATAAAGCTCGaa  <  2:114199/140‑1 (MQ=255)

                                                                                                                                 ttCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCAATAAAGCTCGaa  >  1:562010/1‑140 (MQ=255)

                                                                                                                                 ttCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCAATAAAGCTCGaa  >  1:423870/1‑140 (MQ=255)

                                                                                                                                 ttCTACCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCAATAAAGCTCGaa  <  1:1085507/140‑1 (MQ=255)

                                                                                                                                  tCTACCAACGAAGATCAATCTTATCTACTGACCAAAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCAATAAAGCTCGaa  <  1:286724/140‑1 (MQ=255)

GCGCATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTACGTAAGATCTTATCATTCTCCCACCAAAAAATTATCTTAATGTAACAGCTGGTGTAAGTAAATTCTATCAACGAAGATCAATCTTATCTACTGACC‑AAAAAGGCCTGATAGGGCTTCGCTCACTATACATCCTTGGCTGCAGGTTTAGTTGTACACCACTCCTAAATTTAATGTGTTGGCAATGTGTTCAATAAAGCTCGAA  >  NC_000913/262897‑263165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`