BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,166,231	C→T	P496P (CCG→CCA)	ygiS ←	putative deoxycholate binding periplasmic protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,166,231	0	C	T	100.0%	360.4 / NA	100	P496P (CCG→CCA)	ygiS	putative deoxycholate binding periplasmic protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (51/49); total (51/49)

Only 100 of 101 total aligned reads displayed.

ACGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGCGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTTTCTTCACTA  >  NC_000913/3166096‑3166366

aCGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAgtggtg                                                                                                                                     >  2:321956/1‑140 (MQ=255)

 cGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGc                                                                                                                                    <  1:258855/140‑1 (MQ=255)

     gATAAAGGCATCAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTgt                                                                                                                                <  2:1045368/140‑1 (MQ=255)

        aaaGGCATCAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGAGCCTgttgg                                                                                                                             >  2:34977/1‑140 (MQ=255)

          aGGCATCAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTgttggtt                                                                                                                           >  2:462868/1‑140 (MQ=255)

              aTCAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTtgatg                                                                                                                       >  2:1172645/1‑140 (MQ=255)

                cAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTgatgat                                                                                                                     <  1:63956/140‑1 (MQ=255)

                  aTGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCa                                                                                                                   >  1:204006/1‑140 (MQ=255)

                  aTGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCa                                                                                                                   <  1:154820/140‑1 (MQ=255)

                     tgCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACtt                                                                                                                >  1:171216/1‑140 (MQ=255)

                      gCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTgttggttg                                                                                                                          <  2:570101/129‑1 (MQ=255)

                      gCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTgttggttg                                                                                                                          >  1:570101/1‑129 (MQ=255)

                        cTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTctg                                                                                                             <  1:624698/140‑1 (MQ=255)

                        cTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTctg                                                                                                             <  1:635689/140‑1 (MQ=255)

                        cTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTctg                                                                                                             <  1:1098400/140‑1 (MQ=255)

                        cTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTctg                                                                                                             <  1:855103/140‑1 (MQ=255)

                        cTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGCTGATGATCACTTctg                                                                                                             <  1:870397/140‑1 (MQ=255)

                         ttGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTctgc                                                                                                            <  2:714666/140‑1 (MQ=255)

                          tGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTctgcc                                                                                                           <  1:693154/140‑1 (MQ=255)

                           gATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTctgcc                                                                                                           <  2:1044249/139‑1 (MQ=255)

                           gATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTctgcc                                                                                                           >  1:1044249/1‑139 (MQ=255)

                                    ctctTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACa                                                                                                 >  1:1262092/1‑140 (MQ=255)

                                      ctTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAAc                                                                                               >  2:1227425/1‑140 (MQ=255)

                                      ctTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAAc                                                                                               >  2:1122685/1‑140 (MQ=255)

                                       tttGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACg                                                                                              >  2:817659/1‑140 (MQ=255)

                                       tttGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACg                                                                                              >  2:136195/1‑140 (MQ=255)

                                       tttGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACg                                                                                              >  1:174996/1‑140 (MQ=255)

                                       tttGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACg                                                                                              >  2:461580/1‑140 (MQ=255)

                                       tttGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACg                                                                                              <  2:1262092/140‑1 (MQ=255)

                                       tttGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACg                                                                                              >  1:147041/1‑140 (MQ=255)

                                       tttGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACg                                                                                              >  2:818709/1‑140 (MQ=255)

                                              tAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACg                                                                                       >  2:442440/1‑140 (MQ=255)

                                                 aCATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCtt                                                                                    <  2:15696/140‑1 (MQ=255)

                                                 aCATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCtt                                                                                    <  2:1085633/140‑1 (MQ=255)

                                                   aTAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTg                                                                                  >  2:312036/1‑140 (MQ=255)

                                                    tAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGt                                                                                 <  2:74484/140‑1 (MQ=255)

                                                    tAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGt                                                                                 <  1:439489/140‑1 (MQ=255)

                                                    tAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGt                                                                                 <  1:1152994/140‑1 (MQ=255)

                                                    tAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGt                                                                                 <  1:308676/140‑1 (MQ=255)

                                                    tAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGt                                                                                 <  2:174996/140‑1 (MQ=255)

                                                     aaTCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTc                                                                                >  2:1274286/1‑140 (MQ=255)

                                                      aTCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCg                                                                               <  2:147041/140‑1 (MQ=255)

                                                      aTCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCg                                                                               <  2:154348/140‑1 (MQ=255)

                                                      aTCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCg                                                                               <  1:991075/140‑1 (MQ=255)

                                                      aTCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCg                                                                               <  1:101439/140‑1 (MQ=255)

                                                      aTCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCg                                                                               <  1:866221/140‑1 (MQ=255)

                                                        ccTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCa                                                                             >  2:708232/1‑140 (MQ=255)

                                                        ccTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCa                                                                             >  2:268105/1‑140 (MQ=255)

                                                           ggggATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCa                                                                          >  1:295913/1‑140 (MQ=255)

                                                            gggATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAg                                                                         >  1:913521/1‑140 (MQ=255)

                                                                 tATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATc                                                                    >  2:891820/1‑140 (MQ=255)

                                                                 tATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATc                                                                    >  1:709052/1‑140 (MQ=255)

                                                                 tATGCAGCGG‑AAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCt                                                                   >  2:780423/1‑140 (MQ=255)

                                                                     cAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCg                                                                <  1:136195/140‑1 (MQ=255)

                                                                        cGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCg                                                                               <  1:314147/122‑1 (MQ=255)

                                                                        cGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCg                                                                               >  2:314147/1‑122 (MQ=255)

                                                                        cGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTgg                                                             <  1:521686/140‑1 (MQ=255)

                                                                        cGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTgg                                                             >  2:13052/1‑140 (MQ=255)

                                                                        cGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTgg                                                             <  2:295913/140‑1 (MQ=255)

                                                                        cGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTgg                                                             >  2:344994/1‑140 (MQ=255)

                                                                        cGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTgg                                                             <  2:4510/140‑1 (MQ=255)

                                                                         ggAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGc                                                            <  1:143718/140‑1 (MQ=255)

                                                                         ggAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGc                                                            <  2:632396/140‑1 (MQ=255)

                                                                         ggAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGc                                                            <  2:171216/140‑1 (MQ=255)

                                                                          gAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGcc                                                           <  2:204006/140‑1 (MQ=255)

                                                                          gAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGcc                                                           >  1:1242696/1‑140 (MQ=255)

                                                                          gAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGcc                                                           <  1:373103/140‑1 (MQ=255)

                                                                          gAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGcc                                                           <  2:709052/140‑1 (MQ=255)

                                                                          gAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCACATCAGTGATCTGCGTGGcc                                                           <  1:802501/140‑1 (MQ=255)

                                                                                    aaCGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTa                                                 <  1:312036/140‑1 (MQ=255)

                                                                                    aaCGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTa                                                 <  1:891820/140‑1 (MQ=255)

                                                                                    aaCGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTa                                                 <  2:1205809/140‑1 (MQ=255)

                                                                                    aaCGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTa                                                 <  1:13052/140‑1 (MQ=255)

                                                                                           ggTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTc                                          >  2:264267/1‑140 (MQ=255)

                                                                                           ggTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTc                                          >  1:972149/1‑140 (MQ=255)

                                                                                                aaGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACt                                     >  1:1175367/1‑140 (MQ=255)

                                                                                                 aGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTg                                    >  2:1033402/1‑140 (MQ=255)

                                                                                                   cAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTgcg                                  <  1:708232/140‑1 (MQ=255)

                                                                                                     gTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTa                                                 <  1:915865/123‑1 (MQ=255)

                                                                                                     gTTTGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTa                                                 >  2:915865/1‑123 (MQ=255)

                                                                                                      tttGATTAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCAt                               >  2:540412/1‑140 (MQ=255)

                                                                                                           ttAACGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTc                          >  1:773032/1‑140 (MQ=255)

                                                                                                             aaCGGCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCa                        <  1:268105/140‑1 (MQ=255)

                                                                                                                ggCTGATAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTg                     >  1:508301/1‑140 (MQ=255)

                                                                                                                     aTAGTAGATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGa                >  1:412016/1‑140 (MQ=255)

                                                                                                                         tagATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGtt            <  2:508301/140‑1 (MQ=255)

                                                                                                                         tagATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGtt            >  1:444740/1‑140 (MQ=255)

                                                                                                                           gATAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGtttt          >  1:733500/1‑140 (MQ=255)

                                                                                                                            aTAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTttc         >  1:1228114/1‑140 (MQ=255)

                                                                                                                            aTAGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTttc         >  2:613142/1‑140 (MQ=255)

                                                                                                                              aGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTttctt       >  2:589143/1‑140 (MQ=255)

                                                                                                                              aGGAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTttctt       >  2:261447/1‑140 (MQ=255)

                                                                                                                               ggAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTttcttc      >  1:515500/1‑140 (MQ=255)

                                                                                                                                gAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTTTCTTCa     >  1:1034196/1‑140 (MQ=255)

                                                                                                                                gAATCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTTTCTTCa     >  1:1132283/1‑140 (MQ=255)

                                                                                                                                 aaTCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTTTCTTCAc    <  1:934895/140‑1 (MQ=255)

                                                                                                                                 aaTCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTTTCTTCAc    <  1:818709/140‑1 (MQ=255)

                                                                                                                                   tCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTttcttc      <  2:318382/136‑1 (MQ=255)

                                                                                                                                   tCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTttcttc      >  1:318382/1‑136 (MQ=255)

                                                                                                                                   tCAGTGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTTTCTTCACTa  >  1:543215/1‑140 (MQ=255)

ACGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCTTTGCTGTAGACATAATCCTGGGGATTATGCAGCGGAAAACCGCCAACGTAGGGTTTAAGCAGTTTGATTAACGGCTGATAGTAGATAGGAATCAGCGGTGCCTGTTGGTTGATGATCACTTCTGCCTGCTGATACAACGCATTACGCTTTGTCGCATCAGTGATCTGCGTGGCCTGGTTTAGTAAGGCGTCATACTGCGCATTTTTCCAGTGACCGACGTTTTCTTCACTA  >  NC_000913/3166096‑3166366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`