Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,170,984	G→A	W167* (TGG→TGA)	qseC →	sensory histidine kinase QseC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,170,984	0	G	A	100.0%	320.3 / NA	89	W167* (TGG→TGA)	qseC	sensory histidine kinase QseC
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (39/50);  total (39/50)

GGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTA  >  NC_000913/3170849‑3171119                                                                                                                                        |                                                                                                                                        ggTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTgg                                                                                                                                     >  1:1060622/1‑140 (MQ=255)    cGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCg                                                                                                                                  <  2:134406/140‑1 (MQ=255)    cGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCg                                                                                                                                  <  1:457401/140‑1 (MQ=255)     ggTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGc                                                                                                                                 >  1:691620/1‑140 (MQ=255)       tGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCAc                                                                                                                               >  1:1089071/1‑140 (MQ=255)        gAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACt                                                                                                                              <  2:691620/140‑1 (MQ=255)         aaGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTg                                                                                                                             >  1:752722/1‑140 (MQ=255)         aaGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTg                                                                                                                             <  2:766115/140‑1 (MQ=255)            aCGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCg                                                                                                                          >  1:798671/1‑140 (MQ=255)             cGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGa                                                                                                                         <  2:1190000/140‑1 (MQ=255)             cGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGa                                                                                                                         <  1:840663/140‑1 (MQ=255)             cGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGa                                                                                                                         <  1:272036/140‑1 (MQ=255)             cGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGa                                                                                                                         <  2:41430/140‑1 (MQ=255)                 ccTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGa                                                                                                                         >  2:518038/1‑136 (MQ=255)                 ccTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGa                                                                                                                         <  1:518038/136‑1 (MQ=255)                 ccTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTAt                                                                                                                     >  1:430597/1‑140 (MQ=255)                 ccTTGGCGTTTTGTCTGGATGACCTCACCTGATGGC‑AATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATg                                                                                                                    >  1:484067/1‑140 (MQ=255)                     ggCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTa                                                                                                                 <  1:970942/140‑1 (MQ=255)                     ggCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTa                                                                                                                 >  1:1143261/1‑140 (MQ=255)                     ggCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTa                                                                                                                 <  2:747329/140‑1 (MQ=255)                     ggCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTa                                                                                                                 <  1:106881/140‑1 (MQ=255)                     ggCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTa                                                                                                                 <  1:617502/140‑1 (MQ=255)                      gCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTg                                                                                                                             <  2:808311/127‑1 (MQ=255)                      gCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTg                                                                                                                             >  1:808311/1‑127 (MQ=255)                      gCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTaa                                                                                                                >  2:146420/1‑140 (MQ=255)                       cGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAat                                                                                                               <  2:121577/140‑1 (MQ=255)                          tttGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAatcat                                                                                                            <  2:1089071/140‑1 (MQ=255)                           ttGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAatcatc                                                                                                           <  1:460391/140‑1 (MQ=255)                             gTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATcatcat                                                                                                         <  1:393734/140‑1 (MQ=255)                             gTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATcatcat                                                                                                         <  1:820456/140‑1 (MQ=255)                               cTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCatga                                                                                                       <  1:146420/140‑1 (MQ=255)                               cTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCatga                                                                                                       <  2:245895/140‑1 (MQ=255)                                  gATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATgg                                                                                                    <  2:686762/140‑1 (MQ=255)                                  gATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATgg                                                                                                    <  2:614277/140‑1 (MQ=255)                                  gATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATgg                                                                                                    <  2:322705/140‑1 (MQ=255)                                   aTGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGt                                                                                                   >  1:424039/1‑140 (MQ=255)                                      aCCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGtact                                                                                                >  1:929524/1‑140 (MQ=255)                                          cACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTg                                                                                            >  1:196925/1‑140 (MQ=255)                                            ccTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTggg                                                                                          <  2:650014/140‑1 (MQ=255)                                                aTGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGt                                                                                      >  1:549302/1‑140 (MQ=255)                                                aTGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGt                                                                                      >  1:1007811/1‑140 (MQ=255)                                                  ggCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGa                                                                                    >  2:947783/1‑140 (MQ=255)                                                  ggCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGa                                                                                    >  2:222193/1‑140 (MQ=255)                                                       atatCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTcg                                                                               <  1:960328/140‑1 (MQ=255)                                                         atCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTcgcg                                                                             <  2:1258445/140‑1 (MQ=255)                                                                 gttgttGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGaa                                                                     <  2:1143261/140‑1 (MQ=255)                                                                  ttgttgGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAAc                                                                    >  2:373821/1‑140 (MQ=255)                                                                  ttgttgGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAAc                                                                    >  2:206079/1‑140 (MQ=255)                                                                       ggCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACt                                                               <  2:929524/140‑1 (MQ=255)                                                                        gCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTg                                                              >  1:1264933/1‑140 (MQ=255)                                                                           aGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGgcg                                                           <  2:798671/140‑1 (MQ=255)                                                                             gAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCt                                                         <  2:354258/140‑1 (MQ=255)                                                                               aTGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTgg                                                       <  2:404407/140‑1 (MQ=255)                                                                                 gggAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCa                                                     <  1:947783/140‑1 (MQ=255)                                                                                 gggAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCa                                                     <  1:681640/140‑1 (MQ=255)                                                                                 gggAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCa                                                     <  1:483435/140‑1 (MQ=255)                                                                                 gggAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCa                                                     <  1:206079/140‑1 (MQ=255)                                                                                  ggAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCAc                                                    >  1:187160/1‑140 (MQ=255)                                                                                   gAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACt                                                   <  2:1158768/140‑1 (MQ=255)                                                                                       aCCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTgg                                                       >  2:1141813/1‑132 (MQ=255)                                                                                       aCCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTgg                                                       <  1:1141813/132‑1 (MQ=255)                                                                                       aCCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGt                                               >  2:5789/1‑140 (MQ=255)                                                                                       aCCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGt                                               <  2:1037654/140‑1 (MQ=255)                                                                                       aCCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGt                                               <  2:187160/140‑1 (MQ=255)                                                                                           tGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGc                                           >  1:984843/1‑140 (MQ=255)                                                                                           tGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGc                                           >  2:658409/1‑140 (MQ=255)                                                                                           tGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGc                                           >  2:282489/1‑140 (MQ=255)                                                                                            gAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCg                                          <  2:484067/140‑1 (MQ=255)                                                                                            gAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCg                                          >  2:702160/1‑140 (MQ=255)                                                                                             aaGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTGCTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGt                                         >  2:864329/1‑140 (MQ=255)                                                                                             aaGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGt                                         >  1:817801/1‑140 (MQ=255)                                                                                                  aTGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTTCTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGAccc                                    >  2:337895/1‑140 (MQ=255)                                                                                                    ggCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTg                                  >  2:1261916/1‑140 (MQ=255)                                                                                                    ggCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTg                                  >  1:844407/1‑140 (MQ=255)                                                                                                       gcTGGCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACt                               >  2:357944/1‑140 (MQ=255)                                                                                                           gCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGa                           >  1:357487/1‑140 (MQ=255)                                                                                                           gCGATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGa                           >  1:1162204/1‑140 (MQ=255)                                                                                                             gATTGTTGCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGaaa                         <  1:1082078/140‑1 (MQ=255)                                                                                                                  ttgCCGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCa                    <  2:196925/140‑1 (MQ=255)                                                                                                                     ccGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTa                 >  1:14708/1‑140 (MQ=255)                                                                                                                     ccGGGCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTa                 >  2:1066533/1‑140 (MQ=255)                                                                                                                       gggCAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTaaa               <  2:549302/140‑1 (MQ=255)                                                                                                                          cAATTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAAcgc            <  2:965169/140‑1 (MQ=255)                                                                                                                            aTTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAACGCGa          <  1:222193/140‑1 (MQ=255)                                                                                                                            aTTGATCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAACGCGa          <  1:1066533/140‑1 (MQ=255)                                                                                                                                aTCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAACGCGACTgg      <  1:357944/140‑1 (MQ=255)                                                                                                                                 tCCCGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGc     <  1:702160/140‑1 (MQ=255)                                                                                                                                   ccGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGt   >  2:438600/1‑140 (MQ=255)                                                                                                                                    cGTGACTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTa  <  1:438600/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                        GGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTA  >  NC_000913/3170849‑3171119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑