Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	448,630	C→T	A11T (GCC→ACC)	cyoC ←	cytochrome bo3 ubiquinol oxidase subunit 3

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	448,630	0	C	T	100.0%	351.6 / NA	99	A11T (GCC→ACC)	cyoC	cytochrome bo3 ubiquinol oxidase subunit 3
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (56/43);  total (56/43)

GCCTGCGGTGCCGTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGCAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGAAGCTTTTCACGAT  >  NC_000913/448493‑448766                                                                                                                                          |                                                                                                                                         gccTGCGGTGCCGTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAg                                                                                                                                        >  2:537171/1‑140 (MQ=255)   tacctatGCCGTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTc                                                                                                                                      >  1:810667/7‑140 (MQ=255)     gCGGTGCCGTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTcgc                                                                                                                                    <  1:1158587/140‑1 (MQ=255)           ccGTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCgcgtgcgt                                                                                                                              <  1:537171/140‑1 (MQ=255)           ccGTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCgcgtgcgt                                                                                                                              <  2:818027/140‑1 (MQ=255)           ccGTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCgcgtgcgt                                                                                                                              <  1:118951/140‑1 (MQ=255)           ccGTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCgcgtgcgt                                                                                                                              <  1:986664/140‑1 (MQ=255)            cGTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTc                                                                                                                             <  1:193258/140‑1 (MQ=255)             gTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCa                                                                                                                            >  1:736967/1‑140 (MQ=255)              ttCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCaa                                                                                                                           >  1:577842/1‑140 (MQ=255)                           cATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGcc                                                                                                              >  2:372422/1‑140 (MQ=255)                           cATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGcc                                                                                                              >  1:83046/1‑140 (MQ=255)                             tAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCAt                                                                                                            >  2:1027382/1‑140 (MQ=255)                                    cAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTc                                                                                                       >  2:150800/1‑138 (MQ=255)                                    cAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTc                                                                                                       <  1:150800/138‑1 (MQ=255)                                     aaaCAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGc                                                                                                    >  1:1016239/1‑140 (MQ=255)                                     aaaCAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGc                                                                                                    <  1:91433/140‑1 (MQ=255)                                     aaaCAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGc                                                                                                    >  2:348199/1‑140 (MQ=255)                                     aaaCAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGc                                                                                                    >  2:92835/1‑140 (MQ=255)                                     aaaCAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGc                                                                                                    <  2:996344/140‑1 (MQ=255)                                      aaCAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGcc                                                                                                   <  1:550022/140‑1 (MQ=255)                                      aaCAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGcc                                                                                                   <  1:372422/140‑1 (MQ=255)                                         aaGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTg                                                                                                <  1:1029446/140‑1 (MQ=255)                                         aaGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTg                                                                                                >  1:1204912/1‑140 (MQ=255)                                          aGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGcc                                                                                                   >  2:965193/1‑136 (MQ=255)                                          aGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGcc                                                                                                   <  1:965193/136‑1 (MQ=255)                                           gATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTg                                                                                                >  2:1225087/1‑138 (MQ=255)                                           gATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTg                                                                                                <  1:1225087/138‑1 (MQ=255)                                           gATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGcc                                                                                              <  2:1204912/140‑1 (MQ=255)                                           gATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGcc                                                                                              >  2:692474/1‑140 (MQ=255)                                                     aGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAAtct                                                                                    >  2:1145596/1‑140 (MQ=255)                                                     aGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAAtct                                                                                    >  1:850693/1‑140 (MQ=255)                                                     aGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAAtct                                                                                    >  1:285644/1‑140 (MQ=255)                                                       aaTGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGc                                                                                                    <  1:908840/122‑1 (MQ=255)                                                       aaTGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGc                                                                                                    >  2:908840/1‑122 (MQ=255)                                                       aaTGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGc                                                                                               <  1:382331/127‑1 (MQ=255)                                                       aaTGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGc                                                                                               >  2:382331/1‑127 (MQ=255)                                                       aaTGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCa                                                                                  >  2:438574/1‑140 (MQ=255)                                                         tGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATc                                                                                >  2:571295/1‑140 (MQ=255)                                                         tGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATc                                                                                >  1:151828/1‑140 (MQ=255)                                                         tGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATc                                                                                >  1:302512/1‑140 (MQ=255)                                                         tGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCACCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATc                                                                                >  1:1222014/1‑140 (MQ=255)                                                            aGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAAtct                                                                                    <  1:934504/133‑1 (MQ=255)                                                            aGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAAtct                                                                                    >  2:934504/1‑133 (MQ=255)                                                                 cTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCt                                                                        >  1:300527/1‑140 (MQ=255)                                                                 cTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCt                                                                        >  1:1154166/1‑140 (MQ=255)                                                                 cTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCt                                                                        >  1:1140809/1‑140 (MQ=255)                                                                        ggTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTTAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTc                                                                 >  2:828249/1‑140 (MQ=255)                                                                        ggTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTc                                                                 >  2:1132615/1‑140 (MQ=255)                                                                            gATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGt                                                             >  2:501363/1‑140 (MQ=255)                                                                            gATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGt                                                             <  2:599381/140‑1 (MQ=255)                                                                              tCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGttt                                                           >  2:902907/1‑140 (MQ=255)                                                                              tCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGttt                                                           >  2:411161/1‑140 (MQ=255)                                                                                   aaTCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGa                                                      >  2:652988/1‑140 (MQ=255)                                                                                   aaTCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGa                                                      >  1:428071/1‑140 (MQ=255)                                                                                   aaTCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGa                                                      >  2:336886/1‑140 (MQ=255)                                                                                   aaTCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGGTGCCATTTTACAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGa                                                      >  2:1146419/1‑140 (MQ=255)                                                                                    aTCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGAt                                                     <  1:1145596/140‑1 (MQ=255)                                                                                       cGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTc                                                  >  2:964249/1‑140 (MQ=255)                                                                                         aaGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTg                                                >  1:882155/1‑140 (MQ=255)                                                                                            aTTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCa                                             <  1:115855/140‑1 (MQ=255)                                                                                             ttttGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCAc                                            <  1:92835/140‑1 (MQ=255)                                                                                             ttttGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCAc                                            <  1:336886/140‑1 (MQ=255)                                                                                             ttttGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCAc                                            <  1:692474/140‑1 (MQ=255)                                                                                               ttGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCg                                          >  2:787448/1‑140 (MQ=255)                                                                                                tGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTC‑AAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGc                                        <  1:669720/140‑1 (MQ=255)                                                                                                 ggTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGc                                        <  2:577842/140‑1 (MQ=255)                                                                                                 ggTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGc                                        <  2:736967/140‑1 (MQ=255)                                                                                                 ggTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGc                                        <  1:571295/140‑1 (MQ=255)                                                                                                  gTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCa                                       <  1:411161/140‑1 (MQ=255)                                                                                                  gTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCa                                       <  2:715134/140‑1 (MQ=255)                                                                                                  gTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCa                                       <  1:501363/140‑1 (MQ=255)                                                                                                  gTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCa                                       <  1:652988/140‑1 (MQ=255)                                                                                                  gTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCa                                       <  1:964249/140‑1 (MQ=255)                                                                                                  gTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCa                                       <  1:1225156/140‑1 (MQ=255)                                                                                                  gTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGCTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCa                                       <  2:1016239/140‑1 (MQ=255)                                                                                                   ttCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCAc                                      >  2:1192307/1‑140 (MQ=255)                                                                                                       gCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACgtag                                  >  2:589389/1‑140 (MQ=255)                                                                                                                 tggtgCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGt                        >  2:573285/1‑140 (MQ=255)                                                                                                                  ggtgCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTc                       <  1:787448/140‑1 (MQ=255)                                                                                                                   gtgCCCGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTcc                      >  1:621108/1‑140 (MQ=255)                                                                                                                      cccGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACgt                                    >  1:318487/1‑123 (MQ=255)                                                                                                                      cccGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACgt                                    <  2:318487/123‑1 (MQ=255)                                                                                                                      cccGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCtcg                   >  2:197539/1‑140 (MQ=255)                                                                                                                      cccGTGTTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCAACGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCtcg                   >  2:418200/1‑140 (MQ=255)                                                                                                                          tgtTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGa               >  1:74123/1‑140 (MQ=255)                                                                                                                           gtTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCa                           <  2:539471/127‑1 (MQ=255)                                                                                                                           gtTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCa                           >  1:539471/1‑127 (MQ=255)                                                                                                                           gtTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGaa              >  1:933381/1‑140 (MQ=255)                                                                                                                           gtTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGaa              >  2:778664/1‑140 (MQ=255)                                                                                                                           gtTCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGaa              >  2:120527/1‑140 (MQ=255)                                                                                                                            ttCGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGAAg             >  1:160865/1‑140 (MQ=255)                                                                                                                              cGTGCGCGTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGAAGCt           >  2:326018/1‑140 (MQ=255)                                                                                                                                   gcgTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGAAGCTTTTCa      <  1:902907/140‑1 (MQ=255)                                                                                                                                   gcgTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGAAGCTTTTCa      <  2:285644/140‑1 (MQ=255)                                                                                                                                    cgTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGAAGCTTTTCAc     <  2:850693/140‑1 (MQ=255)                                                                                                                                    cgTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGAAGCTTTTCAc     >  1:853761/1‑140 (MQ=255)                                                                                                                                    cgTGGGTAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGAAGCTTTTCAc     <  1:1192307/140‑1 (MQ=255)                                                                                                                                       gggTAGTCGCGTGCGTTAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGAAGCTTTTCACGAt  <  1:828249/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                         GCCTGCGGTGCCGTTCACCAGAACGGCATAGGTAGCAAACAAGATAGAGAACAGAATGCAGTCGCTCATCAGGTAGATCCAAAATCCGAAGATTTTGGTTCCGCCTGCATCGTGGTGCCCGTGTTCGTGCGCGTGGGCAGTCGCGTGCGTCAAAGTATCAGTTGCCATTTTTCAGCCCTGCCTTAGTAATCTCATCGAAATGCTGGTTTTCCAGTTTTTCGATTTCTGCCACCGGCACGTAGTAATCCACGTCCTCGTCGAAGCTTTTCACGAT  >  NC_000913/448493‑448766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑