BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	733,366	A→G	T1262A (ACT→GCT)	rhsC →	rhs element protein RhsC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	733,366	0	A	G	100.0%	413.0 / NA	109	T1262A (ACT→GCT)	rhsC	rhs element protein RhsC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (55/54); total (55/54)

Only 100 of 110 total aligned reads displayed.

ATATATCACTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAACTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATGGTCTATGGGG  >  NC_000913/733230‑733502

atatatCACTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACGCTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTg                                                                                                                                       >  2:568392/1‑140 (MQ=255)

atatatCACTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTg                                                                                                                                       >  1:1103825/1‑140 (MQ=255)

atatatCACTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTg                                                                                                                                       >  2:296600/1‑140 (MQ=255)

atatatCACTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTg                                                                                                                                       >  2:510014/1‑140 (MQ=255)

      cACTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGaaa                                                                                                                                 >  1:109788/1‑140 (MQ=255)

       aCTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAaag                                                                                                                                >  1:948141/1‑140 (MQ=255)

       aCTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAaag                                                                                                                                >  2:837592/1‑140 (MQ=255)

          cAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAaagaag                                                                                                                             <  2:252055/140‑1 (MQ=255)

          cAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAaagaag                                                                                                                             <  2:109788/140‑1 (MQ=255)

           aGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAaagaag                                                                                                                             <  2:391706/139‑1 (MQ=255)

           aGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAaagaag                                                                                                                             >  1:391706/1‑139 (MQ=255)

           aGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGc                                                                                                                            >  1:458103/1‑140 (MQ=255)

           aGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGc                                                                                                                            >  1:193286/1‑140 (MQ=255)

           aGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGc                                                                                                                            >  1:818433/1‑140 (MQ=255)

            ggATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCg                                                                                                                           <  1:837592/140‑1 (MQ=255)

            ggATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCg                                                                                                                           <  1:296600/140‑1 (MQ=255)

            ggATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCg                                                                                                                           <  2:1242679/140‑1 (MQ=255)

             gATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCgg                                                                                                                          >  2:922377/1‑140 (MQ=255)

             gATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCgg                                                                                                                          <  2:883251/140‑1 (MQ=255)

              aTCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGt                                                                                                                         >  1:448611/1‑140 (MQ=255)

               tCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTc                                                                                                                        <  2:448611/140‑1 (MQ=255)

                ccGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTcc                                                                                                                       >  2:519135/1‑140 (MQ=255)

                  gATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAg                                                                                                                     <  2:237306/140‑1 (MQ=255)

                   aTTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGa                                                                                                                    <  2:1087633/140‑1 (MQ=255)

                   aTTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGa                                                                                                                    >  2:384690/1‑140 (MQ=255)

                    ttGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGat                                                                                                                   <  2:818433/140‑1 (MQ=255)

                       ggCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAaagaag                                                                                                                             >  2:1170145/1‑127 (MQ=255)

                       ggCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAaagaag                                                                                                                             <  1:1170145/127‑1 (MQ=255)

                       ggCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGatata                                                                                                                <  1:931150/140‑1 (MQ=255)

                       ggCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGatata                                                                                                                >  2:1166505/1‑140 (MQ=255)

                       ggCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGatata                                                                                                                >  1:647083/1‑140 (MQ=255)

                           gAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATggg                                                                                                            >  2:362710/1‑140 (MQ=255)

                                       gAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCt                                                                                                <  2:647083/140‑1 (MQ=255)

                                        aaTTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTa                                                                                               <  2:948141/140‑1 (MQ=255)

                                          tttttATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTatc                                                                                             >  2:35021/1‑140 (MQ=255)

                                          tttttATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTatc                                                                                             >  1:583910/1‑140 (MQ=255)

                                           ttttATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTatca                                                                                            <  1:1048291/140‑1 (MQ=255)

                                                 cAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAata                                                                                      >  2:447451/1‑140 (MQ=255)

                                                    tATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCt                                                                                   <  1:595200/140‑1 (MQ=255)

                                                      tCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCttt                                                                                 <  1:258609/140‑1 (MQ=255)

                                                         gTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTtgtg                                                                              >  1:1158615/1‑140 (MQ=255)

                                                           tGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTc                                                                            <  2:1158615/140‑1 (MQ=255)

                                                             aaTCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTccc                                                                          <  2:1207773/140‑1 (MQ=255)

                                                             aaTCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTccc                                                                          <  1:1166505/140‑1 (MQ=255)

                                                                ccGATCTCAAATATAGATCCATTAGGATTAGAAACGCTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGa                                                                       <  1:568392/140‑1 (MQ=255)

                                                                ccGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGa                                                                       <  1:35021/140‑1 (MQ=255)

                                                                  gATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATg                                                                     >  2:1171220/1‑140 (MQ=255)

                                                                       cAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTaaa                                                                <  1:814741/140‑1 (MQ=255)

                                                                       cAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTaaa                                                                >  2:401366/1‑140 (MQ=255)

                                                                          atatAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAggg                                                             <  2:25258/140‑1 (MQ=255)

                                                                          atatAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAggg                                                             <  1:1074484/140‑1 (MQ=255)

                                                                          atatAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAggg                                                             <  1:401366/140‑1 (MQ=255)

                                                                            ataGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGa                                                           <  2:193286/140‑1 (MQ=255)

                                                                             taGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGAc                                                          <  2:763224/140‑1 (MQ=255)

                                                                                aTCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACtat                                                       >  2:837360/1‑140 (MQ=255)

                                                                                aTCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACtat                                                       >  2:141563/1‑140 (MQ=255)

                                                                                aTCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACtat                                                       >  2:1214021/1‑140 (MQ=255)

                                                                                  ccATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATAc                                                     >  1:469975/1‑140 (MQ=255)

                                                                                    aTTAGGATTAGAAACACTAAAATGCATTAAGCCACTACATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTaaa                                                                <  1:526052/127‑1 (MQ=255)

                                                                                    aTTAGGATTAGAAACACTAAAATGCATTAAGCCACTACATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTaaa                                                                >  2:526052/1‑127 (MQ=255)

                                                                                     ttAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAggg                                                             >  1:632513/1‑129 (MQ=255)

                                                                                     ttAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAggg                                                             <  2:632513/129‑1 (MQ=255)

                                                                                     ttAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTtg                                                  >  1:160580/1‑140 (MQ=255)

                                                                                     ttAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTtg                                                  >  2:241921/1‑140 (MQ=255)

                                                                                     ttAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGCGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTtg                                                  >  1:604626/1‑140 (MQ=255)

                                                                                      tAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTtgt                                                 >  1:149779/1‑140 (MQ=255)

                                                                                       aGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTtgtg                                                <  1:384690/140‑1 (MQ=255)

                                                                                             aGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGcc                                          >  1:1127707/1‑140 (MQ=255)

                                                                                              gAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCa                                         >  2:648307/1‑140 (MQ=255)

                                                                                              gAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCa                                         >  1:771027/1‑140 (MQ=255)

                                                                                                   acTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGAcc                                    >  1:933587/1‑140 (MQ=255)

                                                                                                   acTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGAcc                                    >  2:595536/1‑140 (MQ=255)

                                                                                                         aTGCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACggg                              <  2:160580/140‑1 (MQ=255)

                                                                                                           gCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGga                            <  1:478460/140‑1 (MQ=255)

                                                                                                           gCATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGga                            <  1:837360/140‑1 (MQ=255)

                                                                                                            cATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGgag                           >  1:460696/1‑140 (MQ=255)

                                                                                                            cATTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGgag                           <  1:241921/140‑1 (MQ=255)

                                                                                                             aTTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGgaga                          >  2:1028018/1‑140 (MQ=255)

                                                                                                             aTTAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGgaga                          <  1:84510/140‑1 (MQ=255)

                                                                                                               tAAGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAAt                        <  1:519135/140‑1 (MQ=255)

                                                                                                                 aGCCACTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCa                      <  1:239939/140‑1 (MQ=255)

                                                                                                                      cTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAgg                 >  1:65723/1‑140 (MQ=255)

                                                                                                                      cTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAgg                 >  2:468257/1‑140 (MQ=255)

                                                                                                                      cTGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAgg                 >  2:581557/1‑140 (MQ=255)

                                                                                                                       tGCATTCAATGGGCGGGGCGGGGGAAAGAAGCGGCCCGGATATATGGGGGAATCGGTTCTTTCATCAATTTCTTTGTGTCCCAGAGGGAAAAGGGGACTATACTTGGGGGGGCAAAGACCAACGGGGAGAATCAAAAGga                >  2:255618/1‑140 (MQ=255)

                                                                                                                       tGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGga                >  1:440911/1‑140 (MQ=255)

                                                                                                                       tGCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGga                >  2:895953/1‑140 (MQ=255)

                                                                                                                        gCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGgag               <  2:771027/140‑1 (MQ=255)

                                                                                                                        gCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGgag               <  1:1171220/140‑1 (MQ=255)

                                                                                                                        gCATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGgag               <  1:222010/140‑1 (MQ=255)

                                                                                                                         cATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGgaga              <  1:362710/140‑1 (MQ=255)

                                                                                                                         cATTCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGgaga              <  1:141563/140‑1 (MQ=255)

                                                                                                                           ttCAATGGGCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATg            >  2:796454/1‑140 (MQ=255)

                                                                                                                                 gggCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATGGTCTAt      <  2:583910/140‑1 (MQ=255)

                                                                                                                                 gggCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATGGTCTAt      <  2:458103/140‑1 (MQ=255)

                                                                                                                                 gggCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATGGTCTAt      <  1:595536/140‑1 (MQ=255)

                                                                                                                                   gCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATGGTCTATgg    >  2:216187/1‑140 (MQ=255)

                                                                                                                                   gCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATGGTCTATgg    >  2:357734/1‑140 (MQ=255)

                                                                                                                                   gCGGAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATAGTCTATgg    >  1:934014/1‑140 (MQ=255)

                                                                                                                                     ggAGCTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATGGTCTATgggg  >  1:1264972/1‑140 (MQ=255)

ATATATCACTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAACTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATGGTCTATGGGG  >  NC_000913/733230‑733502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`