Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,471,150	(A)7→6	pseudogene (632/3495 nt)	ydbA →	putative outer membrane protein, N‑terminal fragment

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,471,144	0	A	.	100.0%	408.8 / NA	95	pseudogene (626/3495 nt)	ydbA	putative outer membrane protein, N‑terminal fragment
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (53/42);  total (53/42)

TTATAGTGGTGCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCGAAAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAGGCGTTTTATA  >  NC_000913/1471010‑1471278                                                                                                                                       |                                                                                                                                       ttATAGTGGTGCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCGaaaaaa                                                                                                                                   <  1:296686/140‑1 (MQ=255)       tggtgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTaa                                                                                                                            >  2:179759/1‑140 (MQ=255)       tggtgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTaa                                                                                                                            >  1:465010/1‑140 (MQ=255)       tggtgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTaa                                                                                                                            >  2:669509/1‑140 (MQ=255)         gtgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAttt                                                                                                                          >  1:75458/1‑140 (MQ=255)         gtgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAAtt                                                                                                                          >  2:742713/1‑140 (MQ=255)         gtgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAAtt                                                                                                                          >  1:279854/1‑140 (MQ=255)         gtgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAAtt                                                                                                                          >  1:691117/1‑140 (MQ=255)         gtgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAAtt                                                                                                                          >  2:76563/1‑140 (MQ=255)         gtgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAAtt                                                                                                                          >  2:423472/1‑140 (MQ=255)          tgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTa                                                                                                                         >  2:908850/1‑140 (MQ=255)          tgCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTa                                                                                                                         >  2:53484/1‑140 (MQ=255)           gCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGGTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTAt                                                                                                                        >  1:748523/1‑140 (MQ=255)            cAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATg                                                                                                                       >  1:283636/1‑140 (MQ=255)              gggAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGAc                                                                                                                     >  1:643861/1‑140 (MQ=255)              gggAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGAc                                                                                                                     >  2:95932/1‑140 (MQ=255)               ggAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACg                                                                                                                    >  2:25318/1‑140 (MQ=255)                              cAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCaa                                                                                                     >  1:878235/1‑140 (MQ=255)                               aaTTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCaaa                                                                                                    <  2:175329/140‑1 (MQ=255)                               aaTTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCaaa                                                                                                    <  2:465010/140‑1 (MQ=255)                                 ttAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATa                                                                                                  <  2:691117/140‑1 (MQ=255)                                  tAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATAc                                                                                                 <  1:279211/140‑1 (MQ=255)                                   aaCCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGGCGATAGTCTGGCAGCAAATAct                                                                                                <  2:279854/140‑1 (MQ=255)                                         ttGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCaaa                                                                                                    >  2:61499/1‑130 (MQ=255)                                         ttGGGCGGTGTTATAACTATTTATAACGCCGGAGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCaaa                                                                                                    <  1:61499/130‑1 (MQ=255)                                                gtgtTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATgg                                                                                   <  2:283636/140‑1 (MQ=255)                                                gtgtTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATgg                                                                                   <  2:655289/140‑1 (MQ=255)                                                      taACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGttt                                                                             <  2:156221/140‑1 (MQ=255)                                                        aCTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTAt                                                                           <  1:95932/140‑1 (MQ=255)                                                           aTTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAg                                                                        >  2:717953/1‑140 (MQ=255)                                                           aTTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAg                                                                        <  1:318505/140‑1 (MQ=255)                                                           aTTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAg                                                                        >  2:345275/1‑140 (MQ=255)                                                           aTTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAg                                                                        >  1:714527/1‑140 (MQ=255)                                                           aTTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAg                                                                        >  2:318505/1‑140 (MQ=255)                                                           aTTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAg                                                                        >  2:311952/1‑140 (MQ=255)                                                           aTTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAg                                                                        >  2:139062/1‑140 (MQ=255)                                                             ttATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAg                                                                        >  2:846588/1‑138 (MQ=255)                                                             ttATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAg                                                                        <  1:846588/138‑1 (MQ=255)                                                             ttATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCa                                                                      <  1:809790/140‑1 (MQ=255)                                                             ttATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCa                                                                      <  1:25318/140‑1 (MQ=255)                                                             ttATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCa                                                                      >  2:899694/1‑140 (MQ=255)                                                             ttATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCa                                                                      >  2:461931/1‑140 (MQ=255)                                                             ttATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCa                                                                      <  1:179759/140‑1 (MQ=255)                                                                   cGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTAc                                                                >  1:219088/1‑140 (MQ=255)                                                                   cGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTAc                                                                >  2:443071/1‑140 (MQ=255)                                                                    gCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACt                                                               >  2:440327/1‑140 (MQ=255)                                                                      cGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTAt                                                                           <  2:507641/126‑1 (MQ=255)                                                                      cGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTAt                                                                           >  1:507641/1‑126 (MQ=255)                                                                      cGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGc                                                             >  1:318924/1‑140 (MQ=255)                                                                      cGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGc                                                             >  1:177952/1‑140 (MQ=255)                                                                      cGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGc                                                             >  2:624302/1‑140 (MQ=255)                                                                       ggCGCAGGTATGGCGGCCTATGGCGCCAGCAACACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCt                                                            >  1:483267/1‑140 (MQ=255)                                                                          gcAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATc                                                         <  2:483267/140‑1 (MQ=255)                                                                             ggTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAAc                                                      <  1:624302/140‑1 (MQ=255)                                                                                aTGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGAc                                                   <  1:53484/140‑1 (MQ=255)                                                                                   gcggcCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAg                                                <  1:461931/140‑1 (MQ=255)                                                                                   gcggcCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAg                                                >  1:894082/1‑140 (MQ=255)                                                                                      gcCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACg                                             >  2:709890/1‑140 (MQ=255)                                                                                       ccTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACgg                                            <  1:829457/140‑1 (MQ=255)                                                                                       ccTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACgg                                            <  1:717953/140‑1 (MQ=255)                                                                                        cTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACggg                                           >  2:739619/1‑140 (MQ=255)                                                                                        cTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACggg                                           >  1:295283/1‑140 (MQ=255)                                                                                        cTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACggg                                           >  1:566891/1‑140 (MQ=255)                                                                                        cTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACggg                                           <  2:615468/140‑1 (MQ=255)                                                                                        cTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGCCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACggg                                           >  2:408643/1‑140 (MQ=255)                                                                                          aTGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGgtg                                         <  1:95952/140‑1 (MQ=255)                                                                                          aTGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGgtg                                         >  2:768002/1‑140 (MQ=255)                                                                                          aTGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGgtg                                         <  1:739619/140‑1 (MQ=255)                                                                                              cgcCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTtat                                     <  1:768002/140‑1 (MQ=255)                                                                                              cgcCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTtat                                     <  2:550280/140‑1 (MQ=255)                                                                                               gcCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTtatc                                    <  1:405261/140‑1 (MQ=255)                                                                                                ccAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTtatca                                   <  1:709890/140‑1 (MQ=255)                                                                                                 cAGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTtatcaa                                  <  2:878235/140‑1 (MQ=255)                                                                                                  aGCAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTtatcaat                                 <  1:443071/140‑1 (MQ=255)                                                                                                    cAATACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTtatcaatat                               <  2:106167/140‑1 (MQ=255)                                                                                                     aaTACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTtatcaatatc                              >  2:625647/1‑140 (MQ=255)                                                                                                       tACAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTtatcaatatcaa                            >  1:739590/1‑140 (MQ=255)                                                                                                        aCAGTTATTAACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTatcaatatcaat                           <  2:49059/140‑1 (MQ=255)                                                                                                            ttattaACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTg                       >  1:302516/1‑140 (MQ=255)                                                                                                            ttattaACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTg                       >  1:293290/1‑140 (MQ=255)                                                                                                             tattaACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTgg                      <  2:318924/140‑1 (MQ=255)                                                                                                              attaACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGt                     >  2:920763/1‑140 (MQ=255)                                                                                                               ttaACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTa                    <  2:177952/140‑1 (MQ=255)                                                                                                               ttaACCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTa                    <  1:408643/140‑1 (MQ=255)                                                                                                                 aaCCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACt                  >  1:115441/1‑140 (MQ=255)                                                                                                                 aaCCAGGGGACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACt                  >  1:349169/1‑140 (MQ=255)                                                                                                                      ggggACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCa             >  2:491293/1‑140 (MQ=255)                                                                                                                      ggggACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCa             >  2:341788/1‑140 (MQ=255)                                                                                                                      ggggACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCa             >  2:378171/1‑140 (MQ=255)                                                                                                                       gggACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAg            <  2:873238/140‑1 (MQ=255)                                                                                                                       gggACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAg            <  2:51707/140‑1 (MQ=255)                                                                                                                        ggACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAgg           >  1:57746/1‑140 (MQ=255)                                                                                                                        ggACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAgg           <  1:440327/140‑1 (MQ=255)                                                                                                                        ggACGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAgg           <  1:908850/140‑1 (MQ=255)                                                                                                                          aCGATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAGGCg         <  2:585889/140‑1 (MQ=255)                                                                                                                            gATTAACCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAGGCGtt       >  2:539333/1‑140 (MQ=255)                                                                                                                                aaCCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAGGCGTTTtat   <  1:345275/140‑1 (MQ=255)                                                                                                                                 aCCTCG‑AAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAGGCGTTTtata  >  2:415350/1‑140 (MQ=255)                                                                                                                                       |                                                                                                                                       TTATAGTGGTGCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCGAAAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAGGCGTTTTATA  >  NC_000913/1471010‑1471278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑