Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,724,478	(G)6→7	coding (178/522 nt)	sodC ←	superoxide dismutase (Cu‑Zn)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,724,472	1	.	G	100.0%	122.5 / NA	34	G62R (GGT→CGT)	sodC	superoxide dismutase (Cu‑Zn)
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (19/15);  total (19/15)

CCGGCACCTTCTGGCCCTTCATGTTTACCGGTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACC‑GGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTT  >  NC_000913/1724333‑1724603                                                                                                                                             |                                                                                                                                     ccGGCACCTTCTGGCCCTTCATGTTTACCGGTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCAcc                                                                                                                                       <  2:629398/140‑1 (MQ=255)  cGGCACCTTCTGGCCCTTCATGTTTACCGGTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGGCATGTTCACC‑g                                                                                                                                     <  2:417170/140‑1 (MQ=255)           cTGGCCCTTCATGTTTACCGGTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACC‑ggg‑ggggtaa                                                                                                                           <  1:118494/140‑5 (MQ=255)           cTGGCCCTTCATGTTTACCGGTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACC‑ggg‑ggggtaa                                                                                                                           <  2:745705/140‑5 (MQ=255)           cTGGCCCTTCATGTTTACCGGTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACC‑ggg‑ggggtaa                                                                                                                           >  1:403532/1‑136 (MQ=255)                   tCATGTTTACCGGTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCa                                                                                                                    >  2:668429/1‑140 (MQ=255)                   tCATGTTTACCGGTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCa                                                                                                                    >  2:158367/1‑140 (MQ=255)                             cGGTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGa                                                                                                          >  2:288398/1‑140 (MQ=255)                              ggTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGaa                                                                                                         <  2:403532/140‑1 (MQ=255)                               gTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGaaa                                                                                                        >  2:331146/1‑140 (MQ=255)                                       tgGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGa                                                                                                >  2:230660/1‑140 (MQ=255)                                          aTCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCt                                                                                             >  1:832340/1‑140 (MQ=255)                                          aTCAAGATGCCACCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCt                                                                                             >  1:899797/1‑140 (MQ=255)                                             aaGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTa                                                                                          >  1:810537/1‑140 (MQ=255)                                             aaGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTa                                                                                          <  2:679766/140‑1 (MQ=255)                                              aGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTAt                                                                                         <  1:865617/140‑1 (MQ=255)                                                   cccGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGtt                                                                                    >  1:454017/1‑140 (MQ=255)                                                          gCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTaa                                                                             >  1:364426/1‑140 (MQ=255)                                                             gATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATgg                                                                          <  2:137340/140‑1 (MQ=255)                                                             gATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATgg                                                                          <  2:378580/140‑1 (MQ=255)                                                             gATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATgg                                                                          <  2:708676/140‑1 (MQ=255)                                                                 ccGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGAc                                                                      <  1:753624/140‑1 (MQ=255)                                                                    cggcgCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCt                                                                   >  2:555749/1‑140 (MQ=255)                                                                          tGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGAc                                                                      >  1:170379/1‑131 (MQ=255)                                                                          tGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGAc                                                                      <  2:170379/131‑1 (MQ=255)                                                                             cTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGa                                                          <  2:176470/140‑1 (MQ=255)                                                                             cTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGa                                                          <  2:560095/140‑1 (MQ=255)                                                                             cTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGa                                                          <  1:668429/140‑1 (MQ=255)                                                                             cTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGa                                                          <  2:810537/140‑1 (MQ=255)                                                                             cTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGa                                                          <  2:832340/140‑1 (MQ=255)                                                                              tttGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGAc                                                         <  2:594247/140‑1 (MQ=255)                                                                                                 ggctggcAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCATTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACg                                      >  2:862157/1‑140 (MQ=255)                                                                                                 ggctggcAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACg                                      >  1:903147/1‑140 (MQ=255)                                                                                                            tCCTTTGGCATGAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTc                           <  2:364426/140‑1 (MQ=255)                                                                                                                       gAATATGGAAGCCATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACttt                >  1:344219/1‑140 (MQ=255)                                                                                                                                  ccATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAg     >  2:538315/1‑140 (MQ=255)                                                                                                                                  ccATGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAg     >  1:528661/1‑140 (MQ=255)                                                                                                                                    aTGGTCACA‑GGGCGGGTAATGCTCTCAGGTTGGGCGAAAACTCCAGACCTTTATCGGTTTCAGCCGCCGGGGCGCTATCAGGTGACTGCCCTACCCCTTGCAACGAGACGAGGAACATCTCCACTTTTTCACtcccggct   >  2:789287/1‑133 (MQ=255)                                                                                                                                     tGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCtt  >  2:441021/1‑140 (MQ=255)                                                                                                                                     tGTTCACCGGGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCtt  >  1:88583/1‑140 (MQ=255)                                                                                                                                             |                                                                                                                                     CCGGCACCTTCTGGCCCTTCATGTTTACCGGTATTTTGTGGATCAAGATGCCCGCCTGCGGATTCCGCGGCGCTGGCTTTGCCATCTTTGGTGGCTGGCTGGCAGCTTCCTTTGGCATGAATATGGAAGCCATGTTCACC‑GGG‑GGGTAATGCTTTCAGATCGGGCGAAAACTCCAGACCTTTATCGGTTTCAGTAATGGTGACGCTACCAATTGACTGCCCTACCCCTTGCGACGTGACGAGGTTCATCTCGACTTTTTCACTGGCAGCTT  >  NC_000913/1724333‑1724603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑