Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,432,087	C→T	G1013G (GGC→GGT)	stfR →	Rac prophage; putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,432,087	0	C	T	100.0%	247.2 / NA	70	G1013G (GGC→GGT)	stfR	Rac prophage; putative membrane protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (35/35);  total (35/35)

AGGACGGCATTAAATCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTGCTGGCG  >  NC_000913/1431954‑1432223                                                                                                                                      |                                                                                                                                         aGGACGGCATTAAATCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACa                                                                                                                                    >  1:64877/1‑140 (MQ=255) aGGACGGCATTAAATCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACa                                                                                                                                    >  1:217944/1‑140 (MQ=255)  ggACGGCATTAAATCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACaa                                                                                                                                   >  2:430827/1‑140 (MQ=255)   gACGGCATTAAATCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACaaa                                                                                                                                  >  2:410871/1‑140 (MQ=255)       gCATTAAATCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCg                                                                                                                              >  2:595696/1‑140 (MQ=255)          ttAAATCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCt                                                                                                                           <  2:667530/140‑1 (MQ=255)              aTCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAg                                                                                                                       <  2:412757/140‑1 (MQ=255)                  cATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAg                                                                                                                       >  1:511573/1‑136 (MQ=255)                  cATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAg                                                                                                                       <  2:511573/136‑1 (MQ=255)                  cATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGcaca                                                                                                                   <  2:396590/140‑1 (MQ=255)                   aTACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGcacac                                                                                                                  <  1:595696/140‑1 (MQ=255)                       ccACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGcacacacac                                                                                                              <  1:183792/140‑1 (MQ=255)                       ccACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGcacacacac                                                                                                              <  2:427038/140‑1 (MQ=255)                           agcgccagcgcATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCt                                                                                                                           <  2:872718/123‑1 (MQ=255)                           agcgccagcgcATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCt                                                                                                                           >  1:872718/1‑123 (MQ=255)                           agcgccagcgcATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACAcactc                                                                                                          <  1:430827/140‑1 (MQ=255)                            gcgccagcgcATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACAcactca                                                                                                         >  2:171773/1‑140 (MQ=255)                            gcgccagcgcATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACAcactca                                                                                                         <  1:18036/140‑1 (MQ=255)                               ccagcgcATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTa                                                                                                      >  1:100994/1‑140 (MQ=255)                                       tCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGt                                                                                              >  2:482746/1‑140 (MQ=255)                                                 aTTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCt                                                                                    >  1:53149/1‑140 (MQ=255)                                                      gggACGGAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGc                                                                               >  1:752651/1‑140 (MQ=255)                                                      gggACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGc                                                                               >  2:41735/1‑140 (MQ=255)                                                      gggACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGc                                                                               >  2:319422/1‑140 (MQ=255)                                                      gggACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGc                                                                               >  1:163117/1‑140 (MQ=255)                                                      gggACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGc                                                                               >  1:151243/1‑140 (MQ=255)                                                       ggACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCt                                                                              <  2:217944/140‑1 (MQ=255)                                                       ggACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCt                                                                              <  2:874882/140‑1 (MQ=255)                                                             aaaCCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTcc                                                                        <  2:93596/140‑1 (MQ=255)                                                             aaaCCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTcc                                                                        <  2:100994/140‑1 (MQ=255)                                                               aCCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCgg                                                                      <  1:894747/140‑1 (MQ=255)                                                                ccACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGt                                                                     <  2:786783/140‑1 (MQ=255)                                                                      cgtcgtTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGt                                                               <  2:897355/140‑1 (MQ=255)                                                                      cgtcgtTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTCAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGt                                                               <  2:807903/140‑1 (MQ=255)                                                                             tGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCAt                                                        <  1:883406/140‑1 (MQ=255)                                                                             tGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCAt                                                        <  1:3546/140‑1 (MQ=255)                                                                             tGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCAt                                                        <  2:64877/140‑1 (MQ=255)                                                                                ttACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATcaa                                                     <  1:288715/140‑1 (MQ=255)                                                                                  aCGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATcaaca                                                   <  1:469455/140‑1 (MQ=255)                                                                                   cGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATcaacaa                                                  >  2:233804/1‑140 (MQ=255)                                                                                   cGGCACT‑AATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAg                                                 >  2:788154/1‑140 (MQ=255)                                                                                    ggCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAg                                                 <  1:41735/140‑1 (MQ=255)                                                                                    ggCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAg                                                 <  1:744258/140‑1 (MQ=255)                                                                                      cACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGAt                                               >  2:389439/1‑140 (MQ=255)                                                                                         tAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGt                                            >  1:252018/1‑140 (MQ=255)                                                                                         tAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGt                                            >  2:804342/1‑140 (MQ=255)                                                                                            aTCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCtg                                         <  2:151243/140‑1 (MQ=255)                                                                                             tCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCtgt                                        <  1:166223/140‑1 (MQ=255)                                                                                                  gAATAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGc                                   <  1:364552/140‑1 (MQ=255)                                                                                                   aaTAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCa                                  <  2:252018/140‑1 (MQ=255)                                                                                                     tAACACCGGGGCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATa                                >  2:45750/1‑140 (MQ=255)                                                                                                            ggggCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCaaaa                         <  2:903943/140‑1 (MQ=255)                                                                                                            ggggCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCaaaa                         >  1:337923/1‑140 (MQ=255)                                                                                                            ggggCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCaaaa                         <  2:102932/140‑1 (MQ=255)                                                                                                            ggggCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCaaaa                         >  1:617820/1‑140 (MQ=255)                                                                                                             gggCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAAc                        >  1:336055/1‑140 (MQ=255)                                                                                                              ggCACATACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACt                       >  1:612427/1‑140 (MQ=255)                                                                                                                 acaTACACACAGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATg                    <  1:233804/140‑1 (MQ=255)                                                                                                                        cacaGTGTGAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAAcatc             <  1:788154/140‑1 (MQ=255)                                                                                                                             tgtgAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctg        >  2:60602/1‑140 (MQ=255)                                                                                                                             tgtgAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctg        >  1:66072/1‑140 (MQ=255)                                                                                                                             tgtgAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctg        >  2:536043/1‑140 (MQ=255)                                                                                                                             tgtgAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctg        >  1:573657/1‑140 (MQ=255)                                                                                                                              gtgAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctgc       >  2:661050/1‑140 (MQ=255)                                                                                                                               tgAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctgct      >  1:609641/1‑140 (MQ=255)                                                                                                                               tgAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctgct      >  1:735883/1‑140 (MQ=255)                                                                                                                               tgAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctgct      >  2:884703/1‑140 (MQ=255)                                                                                                                               tgAGCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATctgct      >  1:420212/1‑140 (MQ=255)                                                                                                                                  gCGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTGCTGgc   <  1:207278/140‑1 (MQ=255)                                                                                                                                   cGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTGCTGgcg  <  2:609341/140‑1 (MQ=255)                                                                                                                                   cGGTTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTGCTGgcg  <  1:804342/140‑1 (MQ=255)                                                                                                                                      |                                                                                                                                         AGGACGGCATTAAATCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTGCTGGCG  >  NC_000913/1431954‑1432223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑