Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,308,088	(A)6→5	coding (558/1461 nt)	clsA ←	cardiolipin synthase A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,308,083	0	A	.	100.0%	296.7 / NA	70	coding (563/1461 nt)	clsA	cardiolipin synthase A
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (43/27);  total (43/27)

GATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGGAAAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAACACCATCT  >  NC_000913/1307944‑1308209                                                                                                                                            |                                                                                                                               gATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGGa                                                                                                                                <  2:1139084/140‑1 (MQ=255)   tGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGGaaa                                                                                                                              >  2:612436/1‑140 (MQ=255)   tGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGGaaa                                                                                                                              <  2:463231/140‑1 (MQ=255)   tGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGGaaa                                                                                                                              >  1:552726/1‑140 (MQ=255)             gatcatgatcatCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCacacc                                                                                                                   >  1:1167834/1‑139 (MQ=255)             gatcatgatcatCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACt                                                                                                                   >  2:1117705/1‑140 (MQ=255)               tcatgatcatCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTcc                                                                                                                 <  1:1117705/140‑1 (MQ=255)               tcatgatcatCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTcc                                                                                                                 >  2:890980/1‑140 (MQ=255)                  tgatcatCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCcgg                                                                                                              >  1:1336931/1‑140 (MQ=255)                  tgatcatCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACCCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACAC‑CCcggc                                                                                                             >  2:735948/1‑140 (MQ=255)                    atcatcTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCcggcg                                                                                                            <  1:534655/140‑1 (MQ=255)                         cTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTc                                                                                                       >  1:302099/1‑140 (MQ=255)                            gCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAg                                                                                                         <  2:888300/135‑1 (MQ=255)                            gCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAg                                                                                                         >  1:888300/1‑135 (MQ=255)                               aTGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCAt                                                                                                 >  2:1284643/1‑140 (MQ=255)                                 gTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACTGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCa                                                                                               <  2:1336931/140‑1 (MQ=255)                                  ttGGCGCAGGTCCATATGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAg                                                                                                         >  1:546562/1‑129 (MQ=255)                                  ttGGCGCAGGTCCATATGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAg                                                                                                         <  2:546562/129‑1 (MQ=255)                                      cgcAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCgg                                                                                          >  1:37799/1‑140 (MQ=255)                                      cgcAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCgg                                                                                          <  1:204563/140‑1 (MQ=255)                                          ggTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCaat                                                                                      >  2:603255/1‑140 (MQ=255)                                                  cGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCcg                                                                              <  1:612436/140‑1 (MQ=255)                                                  cGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCcg                                                                              >  1:375973/1‑140 (MQ=255)                                                     cGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGt                                                                           >  1:357845/1‑140 (MQ=255)                                                     cGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGt                                                                           >  1:355700/1‑140 (MQ=255)                                                     cGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGt                                                                           >  2:825182/1‑140 (MQ=255)                                                     cGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGt                                                                           >  2:262015/1‑140 (MQ=255)                                                     cGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGt                                                                           >  2:1436775/1‑140 (MQ=255)                                                      gTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATA‑CGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTcg                                                                         >  2:136812/1‑140 (MQ=255)                                                       tAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTcg                                                                         >  2:8584/1‑140 (MQ=255)                                                       tAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTcg                                                                         >  1:887030/1‑140 (MQ=255)                                                             cacacGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAgc                                                                   <  1:1202024/140‑1 (MQ=255)                                                                 cGCAGCAGCTTGACCTTTAAGGCTTCGGCCACTGCAATCCCGGCATTACGCATTAGCTCGGGCACCGGGATGCGG‑AAAAAGCCCCTCCCCCGGCGAATCCGAGCACCAATCGGCAATAAAAGCCGCGTCGCGTAgccgcc                                                               <  2:349675/140‑1 (MQ=255)                                                                    aTCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAgccg                                                                 >  2:451599/1‑135 (MQ=255)                                                                    aTCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAgccg                                                                 <  1:451599/135‑1 (MQ=255)                                                                             aCCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCa                                                   <  2:1168575/140‑1 (MQ=255)                                                                             aCCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCa                                                   >  1:1168575/1‑140 (MQ=255)                                                                              ccTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTa                                                           >  2:98401/1‑131 (MQ=255)                                                                              ccTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTa                                                           <  1:98401/131‑1 (MQ=255)                                                                              ccTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAg                                                  >  1:1351098/1‑140 (MQ=255)                                                                              ccTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAg                                                  >  1:856343/1‑140 (MQ=255)                                                                                  tAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCAc                                              >  1:388014/1‑140 (MQ=255)                                                                                   aaGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCAcc                                             >  2:955093/1‑140 (MQ=255)                                                                                       cTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGt                                         >  2:1453623/1‑140 (MQ=255)                                                                                         tCGACCACTTCAATACCGGCATTACACATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTcc                                       >  1:1347692/1‑140 (MQ=255)                                                                                            aCCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCa                                                   <  2:701085/125‑1 (MQ=255)                                                                                            aCCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCa                                                   >  1:701085/1‑125 (MQ=255)                                                                                            aCCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGcc                                    >  2:307100/1‑140 (MQ=255)                                                                                            aCCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGcc                                    >  1:168531/1‑140 (MQ=255)                                                                                                cTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAGGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATgc                                >  1:1163121/1‑140 (MQ=255)                                                                                                       cccGGCATTACGCATTAGCGGGGGCCCCGGGCTG‑GGGAAAAAGCCACCCACCCGGCGGAGTCGAGCATCATTCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCggg                         <  2:623228/139‑1 (MQ=255)                                                                                                          ggCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAGGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTg                      <  2:1163121/140‑1 (MQ=255)                                                                                                          ggCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTg                      <  2:856343/140‑1 (MQ=255)                                                                                                           gCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGc                     >  1:1434899/1‑140 (MQ=255)                                                                                                           gCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGc                     >  1:738846/1‑140 (MQ=255)                                                                                                           gCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGc                     >  2:1190990/1‑140 (MQ=255)                                                                                                           gCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGc                     >  1:672261/1‑140 (MQ=255)                                                                                                           gCATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGc                     >  1:623228/1‑140 (MQ=255)                                                                                                           gCATTACACATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGc                     <  2:1347692/140‑1 (MQ=255)                                                                                                            gagacagCATTAGCTCGGGCCCCGGGCTGC‑GAAAAAAGCCACACCCCCGGCGGAGCCGAGCATCAATCGGAAATGAATCCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGcc                    <  2:796724/134‑1 (MQ=255)                                                                                                            cATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGcc                    <  2:1434899/140‑1 (MQ=255)                                                                                                            cATTACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGcc                    <  2:375973/140‑1 (MQ=255)                                                                                                            cATTACGCATTAGCTCGGCCCACGGGCTG‑GGGACAAGGCCACCCCCCGGGCGGAGCCGAGCATCCATCGGCAATGAATGCCGCGCCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGcc                    <  2:1167834/140‑1 (MQ=255)                                                                                                              ttACGCATTAGCTCGGGCCAGGGGCTG‑GGGAAAAAGTCACCCTCCCGGCGGAGTCGAGCATCAATCGGCAATGAAGGCCGCGCCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAg                  <  2:1174367/140‑1 (MQ=255)                                                                                                              ttACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAg                  <  1:262015/140‑1 (MQ=255)                                                                                                              ttACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAg                  <  2:168531/140‑1 (MQ=255)                                                                                                              ttACGCATTAGCTCGGGCCACGGGCTGC‑GAAAAAAGCCACCCCCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAg                  <  2:887030/140‑1 (MQ=255)                                                                                                               tACGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGa                 <  2:37799/140‑1 (MQ=255)                                                                                                                 cGCATTAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGata               >  2:1032718/1‑140 (MQ=255)                                                                                                                      tAGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATaaaa          >  1:825157/1‑140 (MQ=255)                                                                                                                       aGCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAac         <  2:775321/140‑1 (MQ=255)                                                                                                                        gCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGcc                    >  2:803197/1‑128 (MQ=255)                                                                                                                        gCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGcc                    <  1:803197/128‑1 (MQ=255)                                                                                                                        gCTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAaca        <  1:1453623/140‑1 (MQ=255)                                                                                                                         cTCGGGCCAGGGGCTGCGG‑AAAAAGCCACCCCCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAacac       <  2:222314/140‑1 (MQ=255)                                                                                                                         cTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGa                 >  1:946071/1‑130 (MQ=255)                                                                                                                         cTCGGGCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGa                 <  2:946071/130‑1 (MQ=255)                                                                                                                         cTCGGGCCACGGGCTGCGG‑AAAAAGCCACACCCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAacac       <  1:8584/140‑1 (MQ=255)                                                                                                                            gggCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAACACCAt    <  1:1032718/140‑1 (MQ=255)                                                                                                                            gggCCACGGGCGGC‑GAAAAAAGCCACCCTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCTTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAACACCAt    <  2:672261/140‑1 (MQ=255)                                                                                                                              gCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAacctgtctc  >  1:796724/1‑133 (MQ=255)                                                                                                                              gCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAACACCAtct  >  1:866825/1‑140 (MQ=255)                                                                                                                              gCCACGGGCTGCGG‑AAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAACACCAtct  <  1:1233109/140‑1 (MQ=255)                                                                                                                                            |                                                                                                                               GATGTAATTATCGATCATGATCATCTTGCGATGTTGGCGCAGGTCCATACGGCGTAAAAACACACGCATCAGATTGACCTTTAAGGCTTCGACCACTTCAATACCGGCATTACGCATTAGCTCGGGCCACGGGCTGCGGAAAAAAGCCACACTCCCGGCGGAGTCGAGCATCAATCGGCAATGAATGCCGCGTCGCGCAGCCGCCATTAATGATTCAGCCACCTGGTCCGCCATGCCGCCGGGCTGCCAGATATAAAACACCATCT  >  NC_000913/1307944‑1308209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑