Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,308,744	(G)5→6	intergenic (‑99/‑44)	clsA ← / → yciY	cardiolipin synthase A/uncharacterized protein YciY

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,308,739	1	.	G	100.0%	202.5 / NA	59	intergenic (‑94/‑49)	clsA/yciY	cardiolipin synthase A/uncharacterized protein YciY
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (28/31);  total (28/31)

AGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑GGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAA  >  NC_000913/1308605‑1308871                                                                                                                                        |                                                                                                                                     aGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑ggggg                                                                                                                                 >  1:1268405/1‑140 (MQ=255) aGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑ggggg                                                                                                                                 >  1:382151/1‑140 (MQ=255)  gAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑gggggg                                                                                                                                <  2:1268405/140‑2 (MQ=255)   aaTGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑ggggggt                                                                                                                               >  2:215656/1‑138 (MQ=255)   aaTGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTC‑TCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑gggggg                                                                                                                                <  2:367435/138‑2 (MQ=255)   aaTGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTC‑TCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑gggggg                                                                                                                                >  1:367435/1‑137 (MQ=255)   aaTGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCACATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑ggggggt                                                                                                                               <  2:991505/140‑3 (MQ=255)    aTGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑ggggggtg                                                                                                                              <  1:1436059/140‑4 (MQ=255)     tGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑ggggggtgg                                                                                                                             <  2:382151/140‑5 (MQ=255)     tGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑ggggggtgg                                                                                                                             >  1:241859/1‑136 (MQ=255)       gCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑ggggggtgggg                                                                                                                           >  2:68241/1‑140 (MQ=255)        ccaaccaaCTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGgggggtggggg                                                                                                                           >  2:571115/1‑140 (MQ=255)           accaacTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGtat                                                                                                                        >  1:965696/1‑140 (MQ=255)             caacTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑g                                                                                                                                     <  1:23915/124‑1 (MQ=255)             caacTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑g                                                                                                                                     >  2:23915/1‑124 (MQ=255)                cTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGa                                                                                                                   >  1:377670/1‑140 (MQ=255)                   aCCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCa                                                                                                                <  2:378141/140‑1 (MQ=255)                   aCCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCa                                                                                                                <  2:965696/140‑1 (MQ=255)                      aaCGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTc                                                                                                             <  2:1128502/140‑1 (MQ=255)                      aaCGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTc                                                                                                             <  1:96522/140‑1 (MQ=255)                      aaCGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTc                                                                                                             <  1:68241/140‑1 (MQ=255)                          tataAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGtt                                                                                                         <  1:215656/140‑1 (MQ=255)                          tataAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGtt                                                                                                         <  2:286017/140‑1 (MQ=255)                           ataAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTa                                                                                                        <  2:1413295/140‑1 (MQ=255)                             aaaCGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTAtt                                                                                                      <  1:908236/140‑1 (MQ=255)                             aaaCGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTAtt                                                                                                      <  1:65409/140‑1 (MQ=255)                               aCGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGc                                                                                                    >  2:940224/1‑140 (MQ=255)                                cGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCa                                                                                                   <  1:940224/140‑1 (MQ=255)                                  gTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATa                                                                                                 <  2:819513/140‑1 (MQ=255)                                  gTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATa                                                                                                 <  2:176234/140‑1 (MQ=255)                                   ttGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATag                                                                                                >  1:184642/1‑140 (MQ=255)                                   gtGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGAGGGGGCATAATGACCATTCTGTTATTGCATag                                                                                                >  1:500162/2‑140 (MQ=255)                                          aGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGagt                                                                                             >  2:327325/1‑136 (MQ=255)                                          aGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGagt                                                                                             <  1:327325/136‑1 (MQ=255)                                             ttAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTAtt                                                                                                      <  2:588620/124‑1 (MQ=255)                                             ttAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTAtt                                                                                                      >  1:588620/1‑124 (MQ=255)                                             ttAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATaga                                                                                               <  1:814982/131‑1 (MQ=255)                                             ttAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATaga                                                                                               >  2:814982/1‑131 (MQ=255)                                                gAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATg                                                                                   >  1:504733/1‑140 (MQ=255)                                                 aaaTCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCa                                                                                                   >  2:1436498/1‑123 (MQ=255)                                                 aaaTCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCa                                                                                                   <  1:1436498/123‑1 (MQ=255)                                                  aaTCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACa                                                                                     >  1:307801/1‑136 (MQ=255)                                                  aaTCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACa                                                                                     <  2:307801/136‑1 (MQ=255)                                                     ccTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCg                                                                              <  2:1347578/140‑1 (MQ=255)                                                         ttGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGt                                                                          <  1:1260330/140‑1 (MQ=255)                                                              aGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAAc                                                                     <  1:222129/140‑1 (MQ=255)                                                              aGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAAc                                                                     >  1:1418580/1‑140 (MQ=255)                                                                cgcATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACgg                                                                   >  1:1441981/1‑140 (MQ=255)                                                                          tGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGgcg                                                         <  1:571115/140‑1 (MQ=255)                                                                              tttACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGgcg                                                         <  1:61701/136‑1 (MQ=255)                                                                              tttACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGgcg                                                         >  2:61701/1‑136 (MQ=255)                                                                                 aCGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCt                                                       >  1:1374398/1‑135 (MQ=255)                                                                                 aCGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCt                                                       <  2:1374398/135‑1 (MQ=255)                                                                                 aCGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGgcgc                                                  >  1:587417/1‑140 (MQ=255)                                                                                 aCGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGgcgc                                                  >  2:958908/1‑140 (MQ=255)                                                                                 aCGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGgcgc                                                  >  1:33850/1‑140 (MQ=255)                                                                                 aCGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGgcgc                                                  >  2:460365/1‑140 (MQ=255)                                                                                 aCGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGgcgc                                                  >  1:704678/1‑140 (MQ=255)                                                                                 aCGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGgcgc                                                  >  1:301278/1‑140 (MQ=255)                                                                                        tGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGc                                           >  2:841164/1‑140 (MQ=255)                                                                                               aTCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGc                                    >  1:578477/1‑140 (MQ=255)                                                                                                   ggCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGc                                <  2:1418580/140‑1 (MQ=255)                                                                                                    gCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGTGCTGGCGCATGCAGCGTCAGGCTAGcc                               >  1:683054/1‑140 (MQ=255)                                                                                                      aaaTAAAAACGCGGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGa                             <  2:704678/140‑1 (MQ=255)                                                                                                                 cgGGAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATcgcg                  <  2:301278/140‑1 (MQ=255)                                                                                                                    gAAAAGCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTg               >  1:834417/1‑140 (MQ=255)                                                                                                                         gCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTg          <  1:460365/140‑1 (MQ=255)                                                                                                                         gCACTGGTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTg          <  2:241859/140‑1 (MQ=255)                                                                                                                               gTCAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGc    >  2:443684/1‑140 (MQ=255)                                                                                                                                 cAGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCaa  <  1:443684/140‑1 (MQ=255)                                                                                                                                  aGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATcgcg                  <  2:993881/123‑1 (MQ=255)                                                                                                                                  aGCGTCGGGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATcgcg                  >  1:993881/1‑123 (MQ=255)                                                                                                                                        |                                                                                                                                     AGAATGGCCAACCAACTCACCAACGTATAAACGGTTGTCATAGATTAGAAATCCTTTTGAAAGCGCATTGTTATGAGTTTACGCATATGGATTCATCTGGCAAATAAAAACGCGGGAAAAGCACTGGTCAGCGTC‑GGGGGTGGGGGTATAATGACCATTCTGTTATTGCATAGAGTAGTTAACATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAA  >  NC_000913/1308605‑1308871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑