| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 150,822 | T→C | A44A (GCA→GCG) | yadC ← | fimbrial tip‑adhesin YadC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 150,822 | 0 | T | C | 98.5% | 435.4 / ‑3.1 | 129 | A44A (GCA→GCG) | yadC | fimbrial tip‑adhesin YadC |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (53/74); total (54/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
TGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTA > NC_000913/150689‑150958 | tGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCa < 1:1007701/140‑1 (MQ=255)tGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCa > 2:692081/1‑140 (MQ=255) aaGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAgg > 1:297792/1‑140 (MQ=255) aaGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAgg < 1:1308929/140‑1 (MQ=255) aaTACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGc > 2:91184/1‑140 (MQ=255) aaTACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGc < 2:802552/140‑1 (MQ=255) tACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCt < 1:1139277/140‑1 (MQ=255) caccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGc < 2:95922/124‑1 (MQ=255) caccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGc > 1:95922/1‑124 (MQ=255) caccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGa < 2:403824/140‑1 (MQ=255) caccaccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGa > 2:832243/1‑140 (MQ=255) ccGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGtt > 2:236392/1‑140 (MQ=255) gTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAgg > 1:1066063/1‑124 (MQ=255) gTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATc < 1:67238/140‑1 (MQ=255) gTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATc < 1:190079/140‑1 (MQ=255) tACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCa > 1:1352006/1‑140 (MQ=255) tGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTc < 2:1275117/140‑1 (MQ=255) gTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTcc > 2:274589/1‑140 (MQ=255) tATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCt > 1:1023693/1‑140 (MQ=255) tATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCt > 1:1114848/1‑140 (MQ=255) aTCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACt > 2:44240/1‑136 (MQ=255) aTCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACt > 2:1329137/1‑136 (MQ=255) aTCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACt < 1:1329137/136‑1 (MQ=255) aTCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACt < 1:44240/136‑1 (MQ=255) ccAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCa < 1:1035143/140‑1 (MQ=255) ccAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCa < 2:1114848/140‑1 (MQ=255) ggTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCatta > 2:1297765/1‑140 (MQ=255) ggTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCatta < 1:1229059/140‑1 (MQ=255) ggTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCatta < 2:1460011/140‑1 (MQ=255) gTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCattat > 2:611013/1‑140 (MQ=255) gACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTcc < 1:34278/140‑1 (MQ=255) aCCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTccc > 1:985188/1‑140 (MQ=255) aCCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTccc > 1:399705/1‑140 (MQ=255) aCCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTcc > 1:389402/1‑139 (MQ=255) aCCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTcc < 2:389402/139‑1 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTTAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt > 1:1450315/1‑140 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt > 1:1346916/1‑140 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt > 2:352398/1‑140 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt > 2:764324/1‑140 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt < 2:295677/140‑1 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt > 2:294544/1‑140 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt > 1:295677/1‑140 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt > 1:1456098/1‑140 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAAt > 2:230725/1‑140 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGG‑GGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATa > 2:162921/1‑140 (MQ=255) tACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTA‑AAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATa > 2:1038761/1‑140 (MQ=255) aCATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTA‑AAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATaa < 1:1038761/140‑1 (MQ=255) cATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATaa < 1:832243/140‑1 (MQ=255) cATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATaa < 1:766280/140‑1 (MQ=255) cATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATaa < 1:1115078/140‑1 (MQ=255) cATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATaa < 2:1079209/140‑1 (MQ=255) ttttACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAAc > 1:994887/1‑140 (MQ=255) tttACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACt < 2:1456098/140‑1 (MQ=255) tACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACt < 1:211633/138‑1 (MQ=255) tACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACt > 2:211633/1‑138 (MQ=255) ccccAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACt < 2:256709/136‑1 (MQ=255) ccccAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGta < 2:1420170/140‑1 (MQ=255) ccccAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACCCCTGCATTATTTCCCACAATAAAACt < 2:1326197/136‑1 (MQ=255) ccccAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACCCCTGCATTATTTCCCACAATAAAACt > 1:1326197/1‑136 (MQ=255) cccAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGtat < 2:453273/140‑1 (MQ=255) ccAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGtata < 2:1415179/140‑1 (MQ=255) gTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGc > 2:701855/1‑140 (MQ=255) tCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACt < 1:890025/130‑1 (MQ=255) tCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACt > 2:890025/1‑130 (MQ=255) gggCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCact < 1:294544/140‑1 (MQ=255) gggCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTCCCCACAATAAAACTTGTATATGCact < 1:92885/140‑1 (MQ=255) gCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCactga < 2:1352006/140‑1 (MQ=255) gCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGATTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCactga < 2:198802/140‑1 (MQ=255) ccGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCactgac > 2:871005/1‑140 (MQ=255) ccGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCactgac < 2:843675/140‑1 (MQ=255) ccGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCactgac < 2:38649/140‑1 (MQ=255) ccGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCactgac > 1:38649/1‑140 (MQ=255) ccGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCactgac < 1:230725/140‑1 (MQ=255) gCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGG‑GGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTac < 1:162921/140‑1 (MQ=255) cGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTac < 1:871005/140‑1 (MQ=255) cGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTac < 2:399705/140‑1 (MQ=255) tGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACTATAAAACTTGTATATGCTCTGACTGTATTacaa < 2:866416/140‑1 (MQ=255) tGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTacaa < 1:1246772/140‑1 (MQ=255) tGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTacaa < 1:510779/140‑1 (MQ=255) tataAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGACCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGaa > 2:1367768/1‑140 (MQ=255) taAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATa < 1:1367768/140‑1 (MQ=255) taAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATa < 2:1076257/140‑1 (MQ=255) aaaaaCCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACa < 2:1085176/140‑1 (MQ=255) aaCCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTg > 2:1150104/1‑140 (MQ=255) ttgcttgcTGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTaaaaa < 1:228992/140‑1 (MQ=255) cttgctGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAg > 1:1161304/1‑140 (MQ=255) tgctGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGaa < 2:1238854/140‑1 (MQ=255) ctGTTGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATg < 2:1346916/140‑1 (MQ=255) ttGATGTGTAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTAc < 1:880083/140‑1 (MQ=255) gtAATTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGa < 1:628200/140‑1 (MQ=255) aTTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATg < 2:1394059/127‑1 (MQ=255) aTTAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATg > 1:1394059/1‑127 (MQ=255) tAAAGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTc < 2:1038866/140‑1 (MQ=255) aaaGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCt > 1:807887/1‑140 (MQ=255) aaaGGTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCt > 1:726252/1‑140 (MQ=255) ggTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTc < 2:818281/139‑1 (MQ=255) ggTCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTc > 1:818281/1‑139 (MQ=255) tCATCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCAtt > 2:1035855/1‑140 (MQ=255) aTCTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCAtttt < 1:352398/140‑1 (MQ=255) cTGCGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTa < 2:1303295/140‑1 (MQ=255) | TGCAGTAAAGAATACCACCACCGGTACCTGTATCCAGGTATGACCAGTACATTTTTACCCCAGTCGGGCCGAGCTGCGTGGGTTTATAAAAAACCAAGTTGCTTGCTGTTGATGTGTAATTAAAGGTCATCTGTGCGGCAGTGGAGGGGCCTCGATAGTTATCAACTCCTGCATTATTTCCCACAATAAAACTTGTATATGCACTGACTGTATTACAACAAGAATACAGTGCTAAAAAAAGAATGTACCTGAAGATAGTCTTCATTTTTA > NC_000913/150689‑150958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |