BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,751,043	T→C	intergenic (+262/+85)	sgbE → / ← yiaT	L‑ribulose‑5‑phosphate 4‑epimerase SgbE/outer membrane protein YiaT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,751,043	0	T	C	100.0%	362.4 / NA	106	intergenic (+262/+85)	sgbE/yiaT	L‑ribulose‑5‑phosphate 4‑epimerase SgbE/outer membrane protein YiaT
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (52/54); total (52/54)

Only 100 of 106 total aligned reads displayed.

CATTAAACCGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGTTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAACTCTCATTA  >  NC_000913/3750908‑3751173

cATTAAACCGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTccc                                                                                                                                <  2:307614/140‑1 (MQ=255)

cATTAAACCGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTccc                                                                                                                                <  2:227784/140‑1 (MQ=255)

   tAAACCGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGt                                                                                                                             >  1:436821/1‑140 (MQ=255)

   tAAACCGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCCGATTCAGACGCCAGGCTCCCGGt                                                                                                                             <  1:682133/140‑1 (MQ=255)

       ccGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTc                                                                                                                                  >  2:639926/1‑131 (MQ=255)

        cGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGaa                                                                                                                        <  2:494891/140‑1 (MQ=255)

        cGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGaa                                                                                                                        <  2:406479/140‑1 (MQ=255)

        cGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGaa                                                                                                                        <  1:498651/140‑1 (MQ=255)

        cGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGaa                                                                                                                        >  1:163046/1‑140 (MQ=255)

          tATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACa                                                                                                                      >  2:988586/1‑140 (MQ=255)

          tATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACa                                                                                                                      <  1:1438117/140‑1 (MQ=255)

             tGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACagag                                                                                                                   <  2:672027/140‑1 (MQ=255)

             tGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACagag                                                                                                                   <  1:804093/140‑1 (MQ=255)

             tGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACagag                                                                                                                   <  2:1189587/140‑1 (MQ=255)

             tGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACagag                                                                                                                   <  2:656983/140‑1 (MQ=255)

                 tGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAAt                                                                                                               >  1:68741/1‑140 (MQ=255)

                    aGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCa                                                                                                            >  1:575666/1‑140 (MQ=255)

                    aGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCa                                                                                                            <  2:817692/140‑1 (MQ=255)

                    aGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCa                                                                                                            >  1:853933/1‑140 (MQ=255)

                      cAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGaa                                                                                                                        >  2:1027277/1‑126 (MQ=255)

                      cAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGaa                                                                                                                        <  1:1027277/126‑1 (MQ=255)

                         gCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGca                                                                                                       >  1:454530/1‑140 (MQ=255)

                         gCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGca                                                                                                       >  2:136602/1‑140 (MQ=255)

                              cAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGca                                                                                                       >  2:91025/1‑135 (MQ=255)

                              cAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGca                                                                                                       <  1:91025/135‑1 (MQ=255)

                              cAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCaacaac                                                                                                  >  2:64028/1‑140 (MQ=255)

                              cAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCaacaac                                                                                                  >  2:772443/1‑140 (MQ=255)

                              cAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCaacaac                                                                                                  >  1:139770/1‑140 (MQ=255)

                              cAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCaacaac                                                                                                  >  1:1458493/1‑140 (MQ=255)

                              cAACGTCGAGTCACTGCATAACCTGTTGCCGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACagag                                                                                                                   >  2:194977/1‑123 (MQ=255)

                                   tCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGcaacaa                                                                                                   <  2:1375457/134‑1 (MQ=255)

                                   tCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGcaacaa                                                                                                   >  1:1375457/1‑134 (MQ=255)

                                   tCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTtg                                                                                             <  2:1291510/140‑1 (MQ=255)

                                   tCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTtg                                                                                             <  1:344502/140‑1 (MQ=255)

                                    cGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTtgt                                                                                            <  1:201042/140‑1 (MQ=255)

                                           cTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTa                                                                                     <  1:136602/140‑1 (MQ=255)

                                           cTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTa                                                                                     >  1:1329404/1‑140 (MQ=255)

                                            tGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTac                                                                                    <  2:1245122/140‑1 (MQ=255)

                                              cATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTacga                                                                                  >  1:886112/1‑140 (MQ=255)

                                                tAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTacgacg                                                                                <  2:575666/140‑1 (MQ=255)

                                                  aCCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGa                                                                              >  1:935732/1‑140 (MQ=255)

                                                      gTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCAc                                                                          <  2:1458493/140‑1 (MQ=255)

                                                          ctgcCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGc                                                                      <  2:95366/140‑1 (MQ=255)

                                                          ctgcCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACAGAGCACCAGc                                                                      >  2:972335/1‑140 (MQ=255)

                                                             cccGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGc                                                                   >  1:660883/1‑140 (MQ=255)

                                                              ccgccgATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCa                                                                  <  1:90332/140‑1 (MQ=255)

                                                               cgccgATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCAc                                                                 >  2:596055/1‑140 (MQ=255)

                                                                 ccgATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCa                                                                  >  1:879001/1‑137 (MQ=255)

                                                                 ccgATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCa                                                                  <  2:879001/137‑1 (MQ=255)

                                                                 ccgATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCg                                                               >  2:1295395/1‑140 (MQ=255)

                                                                   gATGCGCCATTTACGACATTTGAAGGCAATGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGAc                                                             <  1:1157030/140‑1 (MQ=255)

                                                                            tttACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCgg                                                    >  2:1074362/1‑140 (MQ=255)

                                                                                cGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGaa                                                <  1:772443/140‑1 (MQ=255)

                                                                                     tttGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTaaa                                           <  1:1167579/140‑1 (MQ=255)

                                                                                      ttGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTaaaa                                          >  2:162078/1‑140 (MQ=255)

                                                                                         aaGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACg                                       <  1:695476/140‑1 (MQ=255)

                                                                                         aaGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACg                                       <  2:139770/140‑1 (MQ=255)

                                                                                          aGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGc                                      <  2:1435219/140‑1 (MQ=255)

                                                                                            gCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCa                                    <  2:1402581/140‑1 (MQ=255)

                                                                                              aaGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACg                                       <  2:721881/135‑1 (MQ=255)

                                                                                              aaGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACg                                       >  1:721881/1‑135 (MQ=255)

                                                                                              aaGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGc                                  >  2:813465/1‑140 (MQ=255)

                                                                                              aaGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCACGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGc                                  >  1:493326/1‑140 (MQ=255)

                                                                                                gggATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTc                                >  2:414154/1‑140 (MQ=255)

                                                                                                 ggATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCa                               <  2:454530/140‑1 (MQ=255)

                                                                                                   aTTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCAcc                             >  2:882919/1‑140 (MQ=255)

                                                                                                      gTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCg                          <  1:92309/140‑1 (MQ=255)

                                                                                                      gTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCg                          <  2:853933/140‑1 (MQ=255)

                                                                                                      gTTCAGCCATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCg                          <  2:368141/140‑1 (MQ=255)

                                                                                                            ccATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACa                    >  2:483070/1‑140 (MQ=255)

                                                                                                            ccATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACa                    >  1:1095277/1‑140 (MQ=255)

                                                                                                             cATAAGATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACaa                   <  2:886112/140‑1 (MQ=255)

                                                                                                             cATAAGATCCTGATTCAGACGCCAGGCTCACGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACaa                   <  2:493326/140‑1 (MQ=255)

                                                                                                                  gATCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTa              <  1:596055/140‑1 (MQ=255)

                                                                                                                   aTCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaa             <  1:1295395/140‑1 (MQ=255)

                                                                                                                   aTCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaa             <  2:163046/140‑1 (MQ=255)

                                                                                                                   aTCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaa             <  1:1106062/140‑1 (MQ=255)

                                                                                                                    tCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaaa            >  1:714740/1‑140 (MQ=255)

                                                                                                                    tCCTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaaa            <  1:162078/140‑1 (MQ=255)

                                                                                                                     ccTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaaaa           <  2:1120012/140‑1 (MQ=255)

                                                                                                                      cTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAAc          >  2:617130/1‑140 (MQ=255)

                                                                                                                      cTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAAc          >  1:185141/1‑140 (MQ=255)

                                                                                                                      cTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAAc          >  2:1382319/1‑140 (MQ=255)

                                                                                                                      cTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAAc          >  1:291687/1‑140 (MQ=255)

                                                                                                                      cTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAAc          >  1:827754/1‑140 (MQ=255)

                                                                                                                      cTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATCACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaaaa           >  2:385433/1‑139 (MQ=255)

                                                                                                                      cTGATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATCACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaaaa           <  1:385433/139‑1 (MQ=255)

                                                                                                                        gATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaa             <  1:1277694/135‑1 (MQ=255)

                                                                                                                        gATTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaa             >  2:1277694/1‑135 (MQ=255)

                                                                                                                         aTTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAActct       >  2:1405271/1‑140 (MQ=255)

                                                                                                                         aTTCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAActct       >  1:808062/1‑140 (MQ=255)

                                                                                                                           tCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAACTCTCa     <  1:1074362/140‑1 (MQ=255)

                                                                                                                           tCAGACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAACTCTCa     <  1:813465/140‑1 (MQ=255)

                                                                                                                              gACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAACTCTCAt    <  1:663372/138‑1 (MQ=255)

                                                                                                                              gACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAACTCTCAt    >  2:663372/1‑138 (MQ=255)

                                                                                                                              gACGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAACTCTCATTa  <  2:714740/140‑1 (MQ=255)

                                                                                                                               aCGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaaaa           <  1:529694/130‑1 (MQ=255)

                                                                                                                               aCGCCAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTaaaa           >  2:529694/1‑130 (MQ=255)

                                                                                                                                   cAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAAct         >  1:487954/1‑128 (MQ=255)

                                                                                                                                   cAGGCTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAAct         <  2:487954/128‑1 (MQ=255)

CATTAAACCGTATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGTTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCACCGACATCCACCGGTGAATTAAAAACGCCAGCTCACCCCGGTGACAAAGGTAAAACTCTCATTA  >  NC_000913/3750908‑3751173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`