BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	272,361	A→G	intergenic (+171/‑219)	insN → / → eyeA	CP4‑6 prophage; IS911A regulator fragment/CP4‑6 prophage; small RNA EyeA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	272,361	0	A	G	100.0%	391.9 / NA	113	intergenic (+171/‑219)	insN/eyeA	CP4‑6 prophage; IS911A regulator fragment/CP4‑6 prophage; small RNA EyeA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (57/56); total (57/56)

Only 100 of 114 total aligned reads displayed.

AATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAGGCCG  >  NC_000913/272226‑272497

aaTGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAAc                                                                                                                                      <  1:875075/140‑1 (MQ=255)

aaTGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAAc                                                                                                                                      <  2:827829/140‑1 (MQ=255)

  tGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACgg                                                                                                                                    >  2:1441542/1‑140 (MQ=255)

  tGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACgg                                                                                                                                    >  2:667597/1‑140 (MQ=255)

   gAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACggg                                                                                                                                   >  1:642425/1‑140 (MQ=255)

      ccGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGAt                                                                                                                                >  1:589279/1‑140 (MQ=255)

         cgAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGa                                                                                                                             >  2:324932/1‑140 (MQ=255)

         cgAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGa                                                                                                                             >  2:441975/1‑140 (MQ=255)

         cgAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGa                                                                                                                             >  1:288381/1‑140 (MQ=255)

           aGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACgg                                                                                                                                    >  1:921852/1‑131 (MQ=255)

           aGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACgg                                                                                                                                    <  2:921852/131‑1 (MQ=255)

           aGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAgg                                                                                                                           <  2:900715/140‑1 (MQ=255)

              ctgtctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCga                                                                                                                        <  2:249847/140‑1 (MQ=255)

              ctgtctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCga                                                                                                                        <  1:1321955/140‑1 (MQ=255)

              ctgtctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCga                                                                                                                        <  1:484751/140‑1 (MQ=255)

                 tctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGAt                                                                                                                     >  2:1278969/1‑140 (MQ=255)

                 tctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGAt                                                                                                                     >  1:934679/1‑140 (MQ=255)

                  ctgGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATc                                                                                                                    >  1:127073/1‑140 (MQ=255)

                    ggAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCAc                                                                                                                  <  2:589279/140‑1 (MQ=255)

                     gAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACt                                                                                                                 <  1:324932/140‑1 (MQ=255)

                     gAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACt                                                                                                                 <  1:1376867/140‑1 (MQ=255)

                           tGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACt                                                                                                                 >  2:550203/1‑134 (MQ=255)

                           tGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACt                                                                                                                 <  1:550203/134‑1 (MQ=255)

                           tGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCg                                                                                                           >  2:627292/1‑140 (MQ=255)

                           tGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCg                                                                                                           >  1:898020/1‑140 (MQ=255)

                             aaCCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCga                                                                                                                        <  1:867009/125‑1 (MQ=255)

                             aaCCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCga                                                                                                                        >  2:867009/1‑125 (MQ=255)

                               ccGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAgat                                                                                                       >  2:1034440/1‑140 (MQ=255)

                                cGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAgatg                                                                                                      >  2:334758/1‑140 (MQ=255)

                                  gTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAgatgat                                                                                                    >  2:1133848/1‑140 (MQ=255)

                                     aCTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCt                                                                                                 <  2:715240/140‑1 (MQ=255)

                                      cTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTc                                                                                                <  1:507288/140‑1 (MQ=255)

                                       tCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCa                                                                                               <  1:627292/140‑1 (MQ=255)

                                       tCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCa                                                                                               <  1:668110/140‑1 (MQ=255)

                                       tCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCa                                                                                               <  2:1152532/140‑1 (MQ=255)

                                       tCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCa                                                                                               <  2:316276/140‑1 (MQ=255)

                                            aTGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGtt                                                                                          >  1:476131/1‑140 (MQ=255)

                                            aTGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGtt                                                                                          <  1:1133848/140‑1 (MQ=255)

                                             tGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGtt                                                                                          >  1:1209719/1‑139 (MQ=255)

                                             tGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGtt                                                                                          <  2:1209719/139‑1 (MQ=255)

                                                 aaaCCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCa                                                                                               >  2:333102/1‑130 (MQ=255)

                                                 aaaCCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCa                                                                                               <  1:333102/130‑1 (MQ=255)

                                                   aCCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAACCGAGATGATCCTCAAGGTTAAGTACt                                                                                   >  1:541815/1‑140 (MQ=255)

                                                     ccAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGa                                                                                 <  2:649629/140‑1 (MQ=255)

                                                     ccAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGa                                                                                 >  1:660040/1‑140 (MQ=255)

                                                      caacaaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaa                                                                                <  2:476131/140‑1 (MQ=255)

                                                      caacaaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaa                                                                                <  2:541815/140‑1 (MQ=255)

                                                      caacaaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaa                                                                                <  2:208915/140‑1 (MQ=255)

                                                      caacaaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaa                                                                                <  2:56811/140‑1 (MQ=255)

                                                      caacaaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaa                                                                                <  1:1034643/140‑1 (MQ=255)

                                                       aacaaTCCCGCCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaaa                                                                               >  2:115815/1‑140 (MQ=255)

                                                       aacaaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaaa                                                                               >  1:514169/1‑140 (MQ=255)

                                                       aacaaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaaa                                                                               >  1:102945/1‑140 (MQ=255)

                                                         caaTCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAgg                                                                             <  2:898020/140‑1 (MQ=255)

                                                              ccgccGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTgaa                                                                        <  1:115815/137‑1 (MQ=255)

                                                              ccACCGGGTGTGACGGTGGAGAACCTTAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGGAACCCGCTGGCAACGGGGATTGCGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTgaa                                                                        >  1:848165/1‑140 (MQ=255)

                                                              ccACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTgaa                                                                        <  2:682416/140‑1 (MQ=255)

                                                               cACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTgaag                                                                       <  2:102945/140‑1 (MQ=255)

                                                                   gggTGTGACGGTGGAGAACCTTAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACa                                                                   <  2:848165/140‑1 (MQ=255)

                                                                    ggTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaa                                                                                >  2:45991/1‑126 (MQ=255)

                                                                    ggTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGaa                                                                                <  1:45991/126‑1 (MQ=255)

                                                                    ggTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAgg                                                                             <  2:1046242/129‑1 (MQ=255)

                                                                    ggTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAgg                                                                             >  1:1046242/1‑129 (MQ=255)

                                                                    ggTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACAt                                                                  >  2:1403508/1‑140 (MQ=255)

                                                                    ggTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACAt                                                                  >  1:330822/1‑140 (MQ=255)

                                                                      tgtgACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGa                                                                >  1:660857/1‑140 (MQ=255)

                                                                          aCGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAAccc                                                            <  1:667597/140‑1 (MQ=255)

                                                                               ggAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTaa                                                       >  1:1136478/1‑140 (MQ=255)

                                                                                   aaCCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCg                                                   <  1:386606/140‑1 (MQ=255)

                                                                                   aaCCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCg                                                   <  1:754550/140‑1 (MQ=255)

                                                                                    aCCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGc                                                  <  2:684047/140‑1 (MQ=255)

                                                                                        gAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCctct                                              >  2:771313/1‑140 (MQ=255)

                                                                                        gAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCctct                                              >  2:505521/1‑140 (MQ=255)

                                                                                             gCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTggg                                         <  1:771313/140‑1 (MQ=255)

                                                                                                  gACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGaa                                    <  1:1403508/140‑1 (MQ=255)

                                                                                                     cTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAAc                                 <  1:950899/140‑1 (MQ=255)

                                                                                                      tGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACg                                <  2:660040/140‑1 (MQ=255)

                                                                                                      tGCGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACg                                <  2:514169/140‑1 (MQ=255)

                                                                                                        cGGCATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTc                              >  1:370746/1‑140 (MQ=255)

                                                                                                           cATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAAc                                 <  2:1139111/134‑1 (MQ=255)

                                                                                                           cATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAAc                                 >  1:1139111/1‑134 (MQ=255)

                                                                                                           cATGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTcacc                           <  2:1338596/140‑1 (MQ=255)

                                                                                                             tGCCCGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTG‑AAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACg                        >  2:405308/1‑140 (MQ=255)

                                                                                                               cccGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACgg                       <  1:1441542/140‑1 (MQ=255)

                                                                                                               cccGCAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACgg                       >  1:975629/1‑140 (MQ=255)

                                                                                                                   cAGGGTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTa                   >  1:905428/1‑140 (MQ=255)

                                                                                                                     gggTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTcac                            <  2:114132/129‑1 (MQ=255)

                                                                                                                     gggTGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTcac                            >  1:114132/1‑129 (MQ=255)

                                                                                                                        tGATGTAACCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGa              >  2:487784/1‑140 (MQ=255)

                                                                                                                               aCCCGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACa       >  2:23412/1‑140 (MQ=255)

                                                                                                                                cccGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAg      >  2:54828/1‑140 (MQ=255)

                                                                                                                                cccGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAg      >  1:211074/1‑140 (MQ=255)

                                                                                                                                cccGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAg      >  1:352592/1‑140 (MQ=255)

                                                                                                                                cccGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAg      >  2:1418457/1‑140 (MQ=255)

                                                                                                                                cccGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAg      >  2:471910/1‑140 (MQ=255)

                                                                                                                                cccGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAg      >  2:1153738/1‑140 (MQ=255)

                                                                                                                                 ccGCTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAgg     <  2:330822/140‑1 (MQ=255)

                                                                                                                                    cTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAgg     >  1:929101/1‑137 (MQ=255)

                                                                                                                                    cTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAgg     <  2:929101/137‑1 (MQ=255)

                                                                                                                                    cTGGCAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAGGCCg  >  2:1316917/1‑140 (MQ=255)

AATGAACCGCGAGTCTGTCTGGAATATTGAACCGGTAACTCACGATGAGAAACCCAACAATCCCACCGGGTGTGACGGTGGAGAACCTGAGCGGCAGTGACCTGCGGCATGCCCGCAGGGTGATGTAACCCGCTGACAACGGGGATTGAGGCGAGATCACTAAGCCGAGATGATCCTCAAGGTTAAGTACTGAAAGGTTGAAGAACATGAACCCGTTAATCCGCCTCTGTGGGTTGAAAACGTCACCACGGCCTACGTGATCTGACAGGCCG  >  NC_000913/272226‑272497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`