BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	88,184	G→A	A53T (GCA→ACA)	cra →	DNA‑binding transcriptional dual regulator Cra

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	88,184	0	G	A	100.0%	451.4 / NA	127	A53T (GCA→ACA)	cra	DNA‑binding transcriptional dual regulator Cra
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (59/68); total (59/68)

Only 100 of 129 total aligned reads displayed.

GGCTGGCGGGAGTGTCGCGGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGCC  >  NC_000913/88050‑88318

       gggAGTGTCGCGGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTc                                                                                                                            <  2:576743/140‑1 (MQ=255)

           gtgtCGCGGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGc                                                                                                                        <  1:440434/140‑1 (MQ=255)

           gtgtCGCGGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGc                                                                                                                        <  2:524454/140‑1 (MQ=255)

            tgtCGCGGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTg                                                                                                                         <  2:244377/138‑1 (MQ=255)

            tgtCGCGGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCt                                                                                                                       >  2:373792/1‑140 (MQ=255)

            tgtCGCGGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCt                                                                                                                       >  1:1230867/1‑140 (MQ=255)

               cgcgGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGa                                                                                                                    >  1:1358714/1‑140 (MQ=255)

               cgcgGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGa                                                                                                                    <  2:1427662/140‑1 (MQ=255)

                gcgGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCt                                                                                                                              <  2:975798/129‑1 (MQ=255)

                gcgGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCt                                                                                                                              >  1:975798/1‑129 (MQ=255)

                 cgGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACg                                                                                                                  <  2:660712/140‑1 (MQ=255)

                    aCCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGcac                                                                                                               <  2:247693/140‑1 (MQ=255)

                     ccACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGcaca                                                                                                              <  1:342791/140‑1 (MQ=255)

                       aCTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACg                                                                                                            <  2:377128/140‑1 (MQ=255)

                       aCTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACg                                                                                                            <  1:1417105/140‑1 (MQ=255)

                        cTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGt                                                                                                           >  1:1153923/1‑140 (MQ=255)

                        cTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGt                                                                                                           >  1:822595/1‑140 (MQ=255)

                           cAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCt                                                                                                        >  1:1040505/1‑140 (MQ=255)

                            aaGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTa                                                                                                       <  1:1244849/140‑1 (MQ=255)

                                tATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTgg                                                                                                   >  2:381311/1‑140 (MQ=255)

                                tATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTgg                                                                                                   <  2:1153923/140‑1 (MQ=255)

                                  tGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTc                                                                                                 <  2:1416588/140‑1 (MQ=255)

                                  tGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTc                                                                                                 >  2:248636/1‑140 (MQ=255)

                                   gTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCt                                                                                                >  1:257892/1‑140 (MQ=255)

                                   gTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCt                                                                                                >  1:298456/1‑140 (MQ=255)

                                   gTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCt                                                                                                >  1:1053211/1‑140 (MQ=255)

                                     tattaACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTtg                                                                                              <  1:81617/140‑1 (MQ=255)

                                         aaCGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGAt                                                                                          >  1:798002/1‑140 (MQ=255)

                                          aCGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATc                                                                                         >  2:810534/1‑140 (MQ=255)

                                          aCGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATc                                                                                         >  1:416333/1‑140 (MQ=255)

                                           cGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATcc                                                                                        <  2:798002/140‑1 (MQ=255)

                                           cGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATcc                                                                                        <  1:1194304/140‑1 (MQ=255)

                                            ggCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATccc                                                                                       >  1:1079071/1‑140 (MQ=255)

                                            ggCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATccc                                                                                       <  1:539856/140‑1 (MQ=255)

                                            ggCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATccc                                                                                       >  1:449438/1‑140 (MQ=255)

                                            ggCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATccc                                                                                       <  2:873909/140‑1 (MQ=255)

                                              cAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTAt                                                                                                      >  2:578824/1‑123 (MQ=255)

                                              cAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTAt                                                                                                      <  1:578824/123‑1 (MQ=255)

                                              cAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATccc                                                                                       >  2:979130/1‑138 (MQ=255)

                                              cAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATccc                                                                                       <  1:979130/138‑1 (MQ=255)

                                                aaGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGt                                                                                                  <  1:607443/125‑1 (MQ=255)

                                                aaGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGt                                                                                                  >  2:607443/1‑125 (MQ=255)

                                                aaGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGAt                                                                                   >  1:407646/1‑140 (MQ=255)

                                                 aGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATc                                                                                  <  1:248636/140‑1 (MQ=255)

                                                     aaGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGga                                                                              <  2:449438/140‑1 (MQ=255)

                                                     aaGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGga                                                                              <  2:104408/140‑1 (MQ=255)

                                                          aTACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAaca                                                                         <  1:1193371/140‑1 (MQ=255)

                                                          aTACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAaca                                                                         <  2:1079071/140‑1 (MQ=255)

                                                          aTACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAaca                                                                         <  1:1228745/140‑1 (MQ=255)

                                                           tACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACGGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAacac                                                                        >  2:1326455/1‑140 (MQ=255)

                                                           tACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAacac                                                                        <  1:881125/140‑1 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCg                                                                                     >  1:1352966/1‑122 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGAt                                                                                   >  1:930748/1‑124 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGAt                                                                                   <  2:930748/124‑1 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAaca                                                                         >  2:580/1‑134 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAac                                                                          <  2:1448510/133‑1 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAac                                                                          >  1:1448510/1‑133 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCt                                                                   >  2:43071/1‑140 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCt                                                                   >  2:781812/1‑140 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCt                                                                   >  2:35284/1‑140 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCt                                                                   >  1:838117/1‑140 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCt                                                                   >  1:59765/1‑140 (MQ=255)

                                                                tgtgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCt                                                                   >  1:787212/1‑140 (MQ=255)

                                                                  tgAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCtat                                                                 >  2:1297157/1‑140 (MQ=255)

                                                                   gAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCtata                                                                <  2:1053211/140‑1 (MQ=255)

                                                                       gACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCg                                                            >  1:627080/1‑140 (MQ=255)

                                                                       gACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCg                                                            <  2:966194/140‑1 (MQ=255)

                                                                        aCAAAACCGTTGAAAAAGTCATGGCTGTGGTGCATGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAaca                                                                         >  1:1081322/1‑126 (MQ=255)

                                                                         cAANACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCANCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCANACGTTCTATTGGTCTTGTGATCCNCGNTCTGGAGAACACCAGCTATACCCGCa                                                          >  2:18844/1‑140 (MQ=255)

                                                                         cAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCa                                                          >  2:346573/1‑140 (MQ=255)

                                                                           aaaCCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATc                                                        <  1:336403/140‑1 (MQ=255)

                                                                              ccGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCt                                                     <  1:373792/140‑1 (MQ=255)

                                                                              ccGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCt                                                     >  1:23827/1‑140 (MQ=255)

                                                                                 ttGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAAc                                                  <  2:1040505/140‑1 (MQ=255)

                                                                                  tGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACt                                                 <  1:381311/140‑1 (MQ=255)

                                                                                  tGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACt                                                 <  2:59765/140‑1 (MQ=255)

                                                                                            aTGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACg                                       <  1:1040863/140‑1 (MQ=255)

                                                                                                   tggtgCGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGgcg                                <  1:1297157/140‑1 (MQ=255)

                                                                                                   tggtgCGTGAGCACAATTACCACCCGAACGCCGGGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGgcg                                >  2:1322129/1‑140 (MQ=255)

                                                                                                        cGTGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCa                           <  2:1230867/140‑1 (MQ=255)

                                                                                                         gTGAGCACAATTACCACCCGAACGCCGTGACATCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCaa                          <  2:1299963/140‑1 (MQ=255)

                                                                                                          tGAGCACAATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAAc                         >  2:186376/1‑140 (MQ=255)

                                                                                                              cacaATTACCACCCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACgggg                     <  2:1229660/140‑1 (MQ=255)

                                                                                                                      ccaccCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAAc             <  1:1017572/140‑1 (MQ=255)

                                                                                                                       caccCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACg                        <  1:915884/128‑1 (MQ=255)

                                                                                                                       caccCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACg                        >  2:915884/1‑128 (MQ=255)

                                                                                                                       caccCGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAAct            >  1:657116/1‑140 (MQ=255)

                                                                                                                           cGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAActgctg        >  1:1059803/1‑140 (MQ=255)

                                                                                                                           cGAACGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAActgctg        >  1:534629/1‑140 (MQ=255)

                                                                                                                             aaCGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACgggg                     >  1:216152/1‑125 (MQ=255)

                                                                                                                             aaCGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACg                        >  1:4801/1‑122 (MQ=255)

                                                                                                                             aaCGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACg                        <  2:4801/122‑1 (MQ=255)

                                                                                                                             aaCGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATc                <  1:391653/130‑1 (MQ=255)

                                                                                                                             aaCGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATc                >  2:391653/1‑130 (MQ=255)

                                                                                                                             aaCGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGAt      >  2:623706/1‑140 (MQ=255)

                                                                                                                             aaCGCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGAt      >  2:1404047/1‑140 (MQ=255)

                                                                                                                                gCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGc   <  1:42923/140‑1 (MQ=255)

                                                                                                                                gCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGc   <  1:1404047/140‑1 (MQ=255)

                                                                                                                                gCCGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGc   <  2:23827/140‑1 (MQ=255)

                                                                                                                                 ccGTGACAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGcc  <  2:407646/140‑1 (MQ=255)

GGCTGGCGGGAGTGTCGCGGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGCC  >  NC_000913/88050‑88318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`