Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,918,648 T→C V380A (GTG→GCG)  yebT → intermembrane transport protein YebT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,918,6480TC97.8% 296.8 / ‑5.3 90V380A (GTG→GCG) yebTintermembrane transport protein YebT
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (43/45);  total (44/46)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

CTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTA  >  NC_000913/1918512‑1918782
                                                                                                                                        |                                                                                                                                      
cTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGcc                                                                                                                                     >  2:1093828/1‑140 (MQ=255)
cTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGcc                                                                                                                                     >  1:1238139/1‑140 (MQ=255)
 ttCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCa                                                                                                                                    >  1:561375/1‑140 (MQ=255)
  tCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAg                                                                                                                                   >  2:952890/1‑140 (MQ=255)
   cGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAgg                                                                                                                                  >  1:482764/1‑140 (MQ=255)
    gTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGc                                                                                                                                 >  2:1450242/1‑140 (MQ=255)
     tGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCg                                                                                                                                >  2:494688/1‑140 (MQ=255)
          aTACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGaaaaa                                                                                                                           >  2:1007886/1‑140 (MQ=255)
               cGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCAct                                                                                                                      >  2:821122/1‑140 (MQ=255)
                gCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCActg                                                                                                                     <  1:1377400/140‑1 (MQ=255)
                gCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCActg                                                                                                                     <  1:1450242/140‑1 (MQ=255)
                gCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCActg                                                                                                                     <  1:494688/140‑1 (MQ=255)
                gCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCActg                                                                                                                     <  1:79400/140‑1 (MQ=255)
                gCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCActg                                                                                                                     <  1:952890/140‑1 (MQ=255)
                  aTCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCActgct                                                                                                                   >  1:287601/1‑140 (MQ=255)
                      aaTTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCAt                                                                                                               <  1:844134/140‑1 (MQ=255)
                           cGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGa                                                                                                             <  2:63178/137‑1 (MQ=255)
                           cGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGa                                                                                                             >  1:63178/1‑137 (MQ=255)
                           cGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAAcc                                                                                                          >  2:1127635/1‑140 (MQ=255)
                              aaCCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGa                                                                                                       <  1:53406/140‑1 (MQ=255)
                              aaCCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGa                                                                                                       <  2:158235/140‑1 (MQ=255)
                                 ccGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGt                                                                                                    >  2:1251628/1‑140 (MQ=255)
                                    aaaTTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCt                                                                                                 <  1:369505/140‑1 (MQ=255)
                                        tATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAATCCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACg                                                                                             <  1:821122/140‑1 (MQ=255)
                                        tATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACg                                                                                             <  2:561375/140‑1 (MQ=255)
                                        tATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACg                                                                                             <  2:144079/140‑1 (MQ=255)
                                        tATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACg                                                                                             <  2:340132/140‑1 (MQ=255)
                                        tATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACg                                                                                             <  2:1238139/140‑1 (MQ=255)
                                          tCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGct                                                                                           >  1:947382/1‑140 (MQ=255)
                                                  cGATGCTAATCTCAGCGCCCTGTTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACg                                                                                             >  2:829907/1‑130 (MQ=255)
                                                  cGATGCTAATCTCAGCGCCCTGTTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACg                                                                                             <  1:829907/130‑1 (MQ=255)
                                                  cGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGctgaccctga                                                                                   <  2:78238/140‑1 (MQ=255)
                                                  cGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGctgaccctga                                                                                   <  2:808015/140‑1 (MQ=255)
                                                     tGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACcg                                                                                >  2:209965/1‑140 (MQ=255)
                                                      gCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGct                                                                                           >  2:88978/1‑128 (MQ=255)
                                                      gCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGct                                                                                           <  1:88978/128‑1 (MQ=255)
                                                      gCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACcgc                                                                               >  1:1223784/1‑140 (MQ=255)
                                                      gCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACcgc                                                                               <  2:947382/140‑1 (MQ=255)
                                                       cTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACcgcg                                                                              >  2:188049/1‑140 (MQ=255)
                                                         aaTCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGcc                                                                            >  1:255134/1‑140 (MQ=255)
                                                          aTCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCg                                                                           >  2:979501/1‑140 (MQ=255)
                                                          aTCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCg                                                                           >  2:1026753/1‑140 (MQ=255)
                                                          aTCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCg                                                                           <  1:1093828/140‑1 (MQ=255)
                                                            ctcAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGa                                                                         <  2:850962/140‑1 (MQ=255)
                                                               aGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAg                                                                      >  2:234218/1‑140 (MQ=255)
                                                               aGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAg                                                                      >  1:580001/1‑140 (MQ=255)
                                                               aGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAg                                                                      >  2:1418171/1‑140 (MQ=255)
                                                               aGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAg                                                                      >  2:325809/1‑140 (MQ=255)
                                                               aGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAg                                                                      >  2:1039155/1‑140 (MQ=255)
                                                                gcgcCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGt                                                                     <  1:1418171/140‑1 (MQ=255)
                                                                  gcCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTa                                                                   <  2:255134/140‑1 (MQ=255)
                                                                    ccTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACg                                                                 >  1:584198/1‑140 (MQ=255)
                                                                    ccTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACg                                                                 >  1:1187884/1‑140 (MQ=255)
                                                                      tgctgACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGt                                                               >  2:95554/1‑140 (MQ=255)
                                                                      tgctgACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGt                                                               >  2:503170/1‑140 (MQ=255)
                                                                      tgctgACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGt                                                               >  2:868058/1‑140 (MQ=255)
                                                                        ctgACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTAt                                                             <  1:218554/140‑1 (MQ=255)
                                                                           aCCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTa                                                                   >  2:379089/1‑131 (MQ=255)
                                                                           aCCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTa                                                                   <  1:379089/131‑1 (MQ=255)
                                                                           aCCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGa                                                          <  2:803992/140‑1 (MQ=255)
                                                                           aCCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGa                                                          >  1:614530/1‑140 (MQ=255)
                                                                           aCCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGa                                                          >  2:52084/1‑140 (MQ=255)
                                                                             cGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATg                                                        <  2:584198/140‑1 (MQ=255)
                                                                             cGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATg                                                        <  2:1187884/140‑1 (MQ=255)
                                                                             cGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATg                                                        >  1:849357/1‑140 (MQ=255)
                                                                             cGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATg                                                        >  2:956496/1‑140 (MQ=255)
                                                                                cAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCgg                                                     <  1:95554/140‑1 (MQ=255)
                                                                                  aaaCCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTa                                                                   >  1:70313/1‑124 (MQ=255)
                                                                                  aaaCCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTa                                                                   <  2:70313/124‑1 (MQ=255)
                                                                                    aCCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCa                                                 <  1:673299/140‑1 (MQ=255)
                                                                                     ccTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAg                                                >  1:1100298/1‑140 (MQ=255)
                                                                                       ttCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGcc                                              <  2:588141/140‑1 (MQ=255)
                                                                                         cGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCTCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGc                                            >  1:1292973/1‑140 (MQ=255)
                                                                                                   cccGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCa                                  <  1:956496/140‑1 (MQ=255)
                                                                                                     cGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACg                                <  1:868058/140‑1 (MQ=255)
                                                                                                      ggCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACgg                               <  1:1026753/140‑1 (MQ=255)
                                                                                                        cGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCg                             >  2:553739/1‑140 (MQ=255)
                                                                                                        cGATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCg                             <  1:1251628/140‑1 (MQ=255)
                                                                                                         gATGGCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGCCCCTGACCGCGCCGGAAAGTTACTGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGt                            <  2:580001/140‑1 (MQ=255)
                                                                                                            ggCGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCa                         >  1:911843/1‑140 (MQ=255)
                                                                                                              cGAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAgg                       <  2:849357/140‑1 (MQ=255)
                                                                                                               gAGCCACGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTCACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGt                      <  1:325809/140‑1 (MQ=255)
                                                                                                                    aCGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGcc                 <  1:52084/140‑1 (MQ=255)
                                                                                                                     cGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGc                  >  2:538800/1‑138 (MQ=255)
                                                                                                                     cGCAAAGAGTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGc                  <  1:538800/138‑1 (MQ=255)
                                                                                                                           gagTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTat          <  2:482764/140‑1 (MQ=255)
                                                                                                                           gagTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTat          <  1:553739/140‑1 (MQ=255)
                                                                                                                           gagTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTat          <  2:1223784/140‑1 (MQ=255)
                                                                                                                           gagTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTat          <  2:1100298/140‑1 (MQ=255)
                                                                                                                             gTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTatcg        >  1:1392991/1‑140 (MQ=255)
                                                                                                                             gTTCGTTGTTGCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTatcg        <  1:1007886/140‑1 (MQ=255)
                                                                                                                                  ttgttgCGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGt   >  1:3721/1‑140 (MQ=255)
                                                                                                                                   tgttgcGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTAGCGATCGTa  <  2:1292973/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                      
CTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTA  >  NC_000913/1918512‑1918782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: