Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,765,204	T→C	intergenic (‑51/+309)	abpA ← / ← yfjM	CP4‑57 prophage; anti‑bacteriophage protein/CP4‑57 prophage; protein YfjM

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,765,204	0	T	C	100.0%	268.4 / NA	74	intergenic (‑51/+309)	abpA/yfjM	CP4‑57 prophage; anti‑bacteriophage protein/CP4‑57 prophage; protein YfjM
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (29/45);  total (29/45)

TTCGGGTGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGTCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAA  >  NC_000913/2765069‑2765340                                                                                                                                        |                                                                                                                                         ttCGGGTGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCaa                                                                                                                                      >  1:490317/1‑140 (MQ=255)  tCGGGTGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAAt                                                                                                                                     <  2:148460/140‑1 (MQ=255)     ggTGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCgg                                                                                                                                  >  2:211747/1‑140 (MQ=255)      gTGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGa                                                                                                                                 <  1:218400/140‑1 (MQ=255)       tGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGAt                                                                                                                                <  2:849253/140‑1 (MQ=255)       tGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGAt                                                                                                                                <  2:791870/140‑1 (MQ=255)       tGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGAt                                                                                                                                >  2:587374/1‑140 (MQ=255)       tGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGAt                                                                                                                                <  1:587374/140‑1 (MQ=255)       tGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATAGGAt                                                                                                                                <  2:533392/140‑1 (MQ=255)         aCATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCa                                                                                                                              <  2:73467/140‑1 (MQ=255)          cATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAAt                                                                                                                                     >  2:425121/1‑132 (MQ=255)          cATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAAt                                                                                                                                     <  1:425121/132‑1 (MQ=255)           aTGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACt                                                                                                                            <  1:130258/140‑1 (MQ=255)           aTGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACt                                                                                                                            <  1:700868/140‑1 (MQ=255)           aTGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACt                                                                                                                            <  1:211747/140‑1 (MQ=255)            tGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAGAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTg                                                                                                                           >  2:169661/1‑140 (MQ=255)             ggTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGc                                                                                                                          <  1:325375/140‑1 (MQ=255)                aaGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGcatc                                                                                                                       >  2:454492/1‑140 (MQ=255)                     gCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCAc                                                                                                                  >  1:501582/1‑140 (MQ=255)                        aCGCAGTCCTGAAA‑AAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGt                                                                                                              <  2:712956/140‑1 (MQ=255)                         cGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGt                                                                                                              <  1:454492/140‑1 (MQ=255)                         cGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGt                                                                                                              <  2:519696/140‑1 (MQ=255)                         cGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGt                                                                                                              <  1:134268/140‑1 (MQ=255)                         cGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGt                                                                                                              <  2:501582/140‑1 (MQ=255)                              tCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGt                                                                                                              <  1:74174/135‑1 (MQ=255)                              tCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGt                                                                                                              >  2:74174/1‑135 (MQ=255)                              tCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCt                                                                                                         <  2:773660/140‑1 (MQ=255)                                cTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGt                                                                                                              <  1:815973/133‑1 (MQ=255)                                cTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGt                                                                                                              >  2:815973/1‑133 (MQ=255)                                cTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTaa                                                                                                       >  2:609795/1‑140 (MQ=255)                                        aGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCa                                                                                                                >  2:272773/1‑123 (MQ=255)                                        aGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCa                                                                                                                <  1:272773/123‑1 (MQ=255)                                        aGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTca                                                                                               >  1:489815/1‑140 (MQ=255)                                           aaCCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAg                                                                                            <  2:366561/140‑1 (MQ=255)                                                 gCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATtc                                                                                      >  1:168621/1‑140 (MQ=255)                                                  cTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATtct                                                                                     >  2:273906/1‑140 (MQ=255)                                                     ggcggcTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCgg                                                                                  >  2:499288/1‑140 (MQ=255)                                                                   cTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAg                                                                    <  2:230968/140‑1 (MQ=255)                                                                        tCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCtttt                                                               <  1:428109/140‑1 (MQ=255)                                                                           ttCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAg                                                            >  1:135558/1‑140 (MQ=255)                                                                            tCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAgg                                                           >  2:973224/1‑140 (MQ=255)                                                                                    aTTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCcaca                                                   <  2:635923/140‑1 (MQ=255)                                                                                    aTTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCcaca                                                   <  1:973224/140‑1 (MQ=255)                                                                                      ttAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACaaa                                                 >  1:363166/1‑140 (MQ=255)                                                                                        aGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAata                                               >  1:300630/1‑140 (MQ=255)                                                                                            aTCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGt                                           <  2:400669/140‑1 (MQ=255)                                                                                             tCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGAt                                                         >  2:302309/1‑125 (MQ=255)                                                                                             tCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGAt                                                         <  1:302309/125‑1 (MQ=255)                                                                                              ccGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACaaa                                                 <  1:988294/132‑1 (MQ=255)                                                                                              ccGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACaaa                                                 >  2:988294/1‑132 (MQ=255)                                                                                               cGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGa                                                          <  1:549901/122‑1 (MQ=255)                                                                                               cGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGa                                                          >  2:549901/1‑122 (MQ=255)                                                                                               cGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCcaca                                                   <  1:231820/129‑1 (MQ=255)                                                                                               cGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCcaca                                                   >  2:231820/1‑129 (MQ=255)                                                                                               cGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATAtt                                             <  2:821551/135‑1 (MQ=255)                                                                                               cGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATAtt                                             >  1:821551/1‑135 (MQ=255)                                                                                               cGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTg                                            <  1:844402/136‑1 (MQ=255)                                                                                               cGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTg                                            >  2:844402/1‑136 (MQ=255)                                                                                                 tGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAAccc                                      >  1:601358/1‑140 (MQ=255)                                                                                                 tGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAAccc                                      >  1:460256/1‑140 (MQ=255)                                                                                                      aTTTTGCGAAAATTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACg                                 <  2:300630/140‑1 (MQ=255)                                                                                                                aaTTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTgg                       <  2:601358/140‑1 (MQ=255)                                                                                                                aaTTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTgg                       <  2:416557/140‑1 (MQ=255)                                                                                                                aaTTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTgg                       <  1:865248/140‑1 (MQ=255)                                                                                                                aaTTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTgg                       <  2:460256/140‑1 (MQ=255)                                                                                                                aaTTAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTgg                       <  1:753114/140‑1 (MQ=255)                                                                                                                  ttAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGtt                     <  2:490317/140‑1 (MQ=255)                                                                                                                  ttAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGtt                     <  2:976463/140‑1 (MQ=255)                                                                                                                  ttAAGGAGATGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGtt                     <  2:489815/140‑1 (MQ=255)                                                                                                                          aTGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGt                      >  2:119272/1‑131 (MQ=255)                                                                                                                          aTGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGt                      <  1:119272/131‑1 (MQ=255)                                                                                                                          aTGTTATGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACa             >  2:196243/1‑140 (MQ=255)                                                                                                                                tGACACAGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGc       <  2:292823/140‑1 (MQ=255)                                                                                                                                     caGCCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCaa  <  1:299448/140‑1 (MQ=255)                                                                                                                                        |                                                                                                                                         TTCGGGTGACATGGTAAGCGGCTACGCAGTCCTGAAATAAGAAACCGTGCTTGGCGGCTACTCCGCCTGAATCGTTCGACTCCATTTAGACATCCGTGACAATTTTGCGAAAATTAAGGAGATGTTATGACACAGTCCAATCGGATCACTGCATCATCACCAGTGATCTAAATACTTCACAGCCATTCTCGGTCGCAGGTATCAAGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAA  >  NC_000913/2765069‑2765340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑